vOTU vOTU-043371

vOTU: vOTU-043371

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043371
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-17964 → vSUBGEN-33752 → vOTU-043371
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Host range breadth	Order
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0022544
Biosample ID	N/A
Genome length (bp)	42,853 bps
CheckV completeness	100.00% (Complete)
CDS count	53
CDS density	92.84%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	17	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0022544_1	UniRef90_A0A8F0WD75	77.0	0.0000000000000188	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0022544_1	1378168.N510_03079	70.5	0.0000000000025	N/A	N/A
PHROG	UHGV-0022544_4	phrog_5783	298.9	0	N/A	unknown function
UniRef90	UHGV-0022544_4	UniRef90_UPI0010308ECD	291.0	0	NYN domain-containing protein	N/A
eggNOG-mapper	UHGV-0022544_4	742742.HMPREF9452_00448	282.0	0	NYN domain	N/A
Pfam	UHGV-0022544_4	PF01936	N/A	N/A	NYN domain	NYN
COG	UHGV-0022544_4	COG1432	N/A	N/A	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	N/A
structural_annotation	UHGV-0022544_4	PF01936,TIGR00288,COG1432	N/A	N/A	N/A	N/A
UniRef90	UHGV-0022544_5	UniRef90_A0A843IZ65	58.9	0.000000000706	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-0022544_5	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0022544_5	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0022544_5	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0022544_6	K01447	107.1	2.2e-31	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0022544_6	phrog_1794	111.9	7.2e-33	amidase	lysis
UniRef90	UHGV-0022544_6	UniRef90_A0A3D4VSU2	160.0	1.4013e-45	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0022544_6	397290.C810_00440	148.0	4.53e-39	Ami_2	N/A
Pfam	UHGV-0022544_6	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0022544_6	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0022544_6	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0022544_7	phrog_13256	61.9	6.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0022544_7	428125.CLOLEP_01907	76.3	1.57e-17	N/A	N/A
eggNOG-mapper	UHGV-0022544_9	1519439.JPJG01000023_gene533	77.8	1.98e-17	N/A	N/A
PHROG	UHGV-0022544_10	phrog_30034	108.0	1.2e-31	N/A	unknown function
UniRef90	UHGV-0022544_10	UniRef90_A0A3D1XGA4	236.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0022544_10	411471.SUBVAR_06976	98.6	6.01e-24	N/A	N/A
Pfam	UHGV-0022544_10	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
Pfam	UHGV-0022544_11	PF19079	N/A	N/A	Collagen-flanked surface repeat	CFSR
KOfam	UHGV-0022544_13	K16628	45.3	0.00000000000027	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0022544_13	phrog_819	48.2	0.000000000000099	tail protein	tail
Pfam	UHGV-0022544_13	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0022544_13	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0022544_14	PF01835,NF005176,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0022544_15	phrog_22978	127.3	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0022544_15	1408437.JNJN01000039_gene389	539.0	0	heme binding	N/A
COG	UHGV-0022544_15	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
UniRef90	UHGV-0022544_16	UniRef90_R5DCX9	194.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0022544_16	1410650.JHWL01000003_gene2815	139.0	1.77e-34	N/A	N/A
eggNOG-mapper	UHGV-0022544_18	537007.BLAHAN_05255	61.2	0.000000361	N/A	N/A
PHROG	UHGV-0022544_19	phrog_12105	119.3	1.9e-35	N/A	unknown function
PHROG	UHGV-0022544_20	phrog_15239	45.6	0.00000000000099	N/A	unknown function
PHROG	UHGV-0022544_21	phrog_1357	244.5	0	major head protein	head and packaging
UniRef90	UHGV-0022544_21	UniRef90_A0A2V2CFL5	403.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0022544_21	1410650.JHWL01000003_gene2830	282.0	0	N/A	N/A
Pfam	UHGV-0022544_21	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0022544_21	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0022544_21	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0022544_22	phrog_13908	193.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0022544_22	1410650.JHWL01000003_gene2831	124.0	8.12e-31	N/A	N/A
PHROG	UHGV-0022544_23	phrog_156	303.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0022544_23	1410650.JHWL01000003_gene2833	544.0	0	N/A	N/A
structural_annotation	UHGV-0022544_23	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0022544_24	phrog_511	207.4	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0022544_24	1410650.JHWL01000003_gene2827	317.0	0	N/A	N/A
structural_annotation	UHGV-0022544_24	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-0022544_25	K06909	133.0	2.8e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0022544_25	phrog_2	125.7	5.7e-37	terminase large subunit	head and packaging
UniRef90	UHGV-0022544_25	UniRef90_A0A3D5TIM8	622.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0022544_25	1410650.JHWL01000003_gene2834	585.0	0	N/A	N/A
Pfam	UHGV-0022544_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0022544_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0022544_25	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0022544_26	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0022544_27	phrog_3584	121.7	6e-36	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0022544_27	1203606.HMPREF1526_00985	130.0	9.32e-35	N/A	N/A
PHROG	UHGV-0022544_28	phrog_31029	55.2	0.000000000000001	N/A	unknown function
PHROG	UHGV-0022544_29	phrog_478	126.5	1.1e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0022544_29	UniRef90_R6E548	161.0	0	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-0022544_29	1111121.HMPREF1247_0834	106.0	9.95e-28	N/A	N/A
PHROG	UHGV-0022544_30	phrog_38832	63.3	2.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0022544_30	665956.HMPREF1032_03087	72.0	0.0000000000000867	N/A	N/A
structural_annotation	UHGV-0022544_30	PF11717,TIGR02450	N/A	N/A	N/A	N/A
UniRef90	UHGV-0022544_33	UniRef90_A0A098GES5	103.0	1.14e-26	Putative phage associated protein	N/A
structural_annotation	UHGV-0022544_33	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0022544_35	phrog_8470	219.1	0	N/A	unknown function
UniRef90	UHGV-0022544_35	UniRef90_UPI0019580896	359.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0022544_35	1226322.HMPREF1545_00100	363.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0022544_35	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0022544_35	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0022544_36	phrog_36399	104.1	1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0022544_36	1007096.BAGW01000031_gene116	95.9	3.45e-24	N/A	N/A
PHROG	UHGV-0022544_37	phrog_15609	235.8	0	N/A	unknown function
UniRef90	UHGV-0022544_37	UniRef90_UPI001246A313	130.0	2.06e-31	N/A	N/A
eggNOG-mapper	UHGV-0022544_37	1274374.CBLK010000060_gene541	107.0	1.31e-23	N/A	N/A
Pfam	UHGV-0022544_37	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0022544_37	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0022544_37	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
KOfam	UHGV-0022544_38	K03496	201.8	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0022544_38	phrog_164	167.2	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022544_38	UniRef90_A0A845R968	254.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0022544_38	1226322.HMPREF1545_00097	229.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0022544_38	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0022544_38	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0022544_38	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0022544_39	K02314	245.2	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0022544_39	phrog_19	204.0	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022544_39	UniRef90_G4KRS6	315.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0022544_39	1007096.BAGW01000033_gene1616	333.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0022544_39	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0022544_39	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0022544_39	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0022544_39	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0022544_40	phrog_270	62.2	1.2e-17	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022544_40	UniRef90_UPI00195619BC	59.7	0.000000595	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0022544_40	742738.HMPREF9460_00851	61.6	0.0000000243	Helix-turn-helix domain	N/A
Pfam	UHGV-0022544_40	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0022544_40	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0022544_40	PF02002,MF_01909,NF040939,COG5529	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0022544_43	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0022544_49	K18830	60.7	3.5e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0022544_49	phrog_4	49.1	0.00000000000013	transcriptional repressor	transcription regulation
UniRef90	UHGV-0022544_49	UniRef90_A0A2U1BEG8	127.0	1.75e-35	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0022544_49	445972.ANACOL_03315	121.0	4.52e-34	N/A	N/A
Pfam	UHGV-0022544_49	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0022544_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0022544_49	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0022544_52	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0022544_53	K14059	108.8	9e-32	int; integrase	N/A
PHROG	UHGV-0022544_53	phrog_1	98.8	6.9e-29	integrase	integration and excision
UniRef90	UHGV-0022544_53	UniRef90_R0BQD6	220.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0022544_53	478749.BRYFOR_05407	211.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0022544_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0022544_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0022544_53	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0022544	Yes	42,853	60	100	1
UHGV-0016848	No	42,659	60	100	1