vOTU vOTU-043431

vOTU: vOTU-043431

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043431
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-01992 → vGENUS-02262 → vSUBGEN-01877 → vOTU-043431
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → PeH17 → PeH17 sp000435055
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0023209
Biosample ID	SAMEA4765624
Genome length (bp)	37,757 bps
CheckV completeness	100.00% (Complete)
CDS count	61
CDS density	89.60%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → PeH17 → PeH17 sp000435055	Total connections	37	Host agreement	75.68
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0023209_1	phrog_115	128.6	4.2e-38	minor head protein	head and packaging
UniRef90	UHGV-0023209_1	UniRef90_A0A3D3Y165	433.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0023209_1	1111121.HMPREF1247_0797	159.0	6.88e-40	cell adhesion	N/A
Pfam	UHGV-0023209_1	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0023209_1	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0023209_1	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_3	phrog_5	84.0	2.1e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-0023209_3	UniRef90_A0A3A9EIF3	173.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0023209_3	386415.NT01CX_2170	104.0	4.48e-27	N/A	N/A
Pfam	UHGV-0023209_3	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0023209_3	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0023209_3	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_4	phrog_194	48.5	0.00000000000018	head scaffolding protein	head and packaging
UniRef90	UHGV-0023209_4	UniRef90_A0A6B9SU02	131.0	5.16e-35	Fibronectin autolysin	N/A
structural_annotation	UHGV-0023209_4	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_5	phrog_544	180.0	0	major head protein	head and packaging
UniRef90	UHGV-0023209_5	UniRef90_A0A810PZM2	579.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0023209_5	1347392.CCEZ01000005_gene1236	273.0	0	N/A	N/A
Pfam	UHGV-0023209_5	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0023209_5	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_7	phrog_17977	71.2	1.2e-20	N/A	unknown function
UniRef90	UHGV-0023209_7	UniRef90_UPI00141211AB	93.6	2.45e-22	head-tail adaptor protein	N/A
structural_annotation	UHGV-0023209_7	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023209_8	UniRef90_A0A415JI88	108.0	8.06e-28	N/A	N/A
structural_annotation	UHGV-0023209_8	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_9	phrog_885	73.1	3e-21	major tail protein	tail
UniRef90	UHGV-0023209_9	UniRef90_A0A843J9F0	213.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0023209_9	1504822.CCNO01000012_gene492	244.0	0	N/A	N/A
structural_annotation	UHGV-0023209_9	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023209_10	UniRef90_A0A285PXU7	70.5	0.000000000000596	Consensus disorder prediction	N/A
PHROG	UHGV-0023209_11	phrog_6900	261.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0023209_11	536233.CLO_1577	306.0	0	tape measure	N/A
COG	UHGV-0023209_11	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
eggNOG-mapper	UHGV-0023209_12	862969.SCI_1226	66.2	0.00000000145	N/A	N/A
PHROG	UHGV-0023209_13	phrog_3558	41.5	5.9e-25	tail protein	tail
UniRef90	UHGV-0023209_13	UniRef90_N2BTX1	67.0	0.00000002	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-0023209_13	1111121.HMPREF1247_1242	67.0	0.00000000336	Prophage endopeptidase tail	N/A
Pfam	UHGV-0023209_13	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0023209_13	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0023209_13	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_14	phrog_15594	60.5	2.5e-17	N/A	unknown function
structural_annotation	UHGV-0023209_14	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_15	phrog_21765	49.8	0.000000000000049	N/A	unknown function
COG	UHGV-0023209_16	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0023209_19	phrog_13480	160.1	0	endolysin	lysis
UniRef90	UHGV-0023209_19	UniRef90_UPI001AFF519B	192.0	0	N/A	N/A
eggNOG-mapper	UHGV-0023209_19	1122925.KB895377_gene1250	186.0	0	N/A	N/A
Pfam	UHGV-0023209_19	PF08924	N/A	N/A	Rv2525c-like, glycoside hydrolase-like domain	Rv2525c_GlyHyd-like
COG	UHGV-0023209_19	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0023209_21	PF09682	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_22	phrog_1009	42.9	0.0000000000079	N/A	unknown function
eggNOG-mapper	UHGV-0023209_22	97138.C820_00248	50.4	0.000000466	N/A	N/A
UniRef90	UHGV-0023209_23	UniRef90_UPI0004E194C7	75.1	2.09e-16	LuxR C-terminal-related transcriptional regulator	N/A
Pfam	UHGV-0023209_23	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-0023209_23	PF13404,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_24	phrog_3754	86.2	3.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0023209_24	476272.RUMHYD_01764	176.0	0	N/A	N/A
PHROG	UHGV-0023209_25	phrog_21718	108.7	4.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-0023209_25	397290.C810_05210	100.0	1.03e-24	N/A	N/A
PHROG	UHGV-0023209_26	phrog_22984	77.3	7.8e-23	N/A	unknown function
PHROG	UHGV-0023209_27	phrog_16490	156.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0023209_27	1408437.JNJN01000043_gene803	146.0	2.14001e-40	N/A	N/A
PHROG	UHGV-0023209_28	phrog_20016	194.9	0	N/A	unknown function
UniRef90	UHGV-0023209_28	UniRef90_A0A285PT46	204.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0023209_28	1226322.HMPREF1545_00077	177.0	0	N/A	N/A
structural_annotation	UHGV-0023209_28	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0023209_29	476272.RUMHYD_01772	53.1	0.000000776	N/A	N/A
structural_annotation	UHGV-0023209_29	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0023209_30	1226322.HMPREF1545_00079	110.0	4.91e-30	N/A	N/A
KOfam	UHGV-0023209_31	K14059	108.5	9.9e-32	int; integrase	N/A
PHROG	UHGV-0023209_31	phrog_1	130.3	1.8e-38	integrase	integration and excision
UniRef90	UHGV-0023209_31	UniRef90_R6I1Y0	280.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0023209_31	246199.CUS_5913	112.0	5.1e-25	Phage integrase family	N/A
Pfam	UHGV-0023209_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0023209_31	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0023209_31	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_32	phrog_9336	67.8	1.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0023209_32	1408303.JNJJ01000047_gene2868	77.8	0.00000000000026	N/A	N/A
Pfam	UHGV-0023209_32	PF14020	N/A	N/A	N/A	DUF4236
structural_annotation	UHGV-0023209_34	PF13601,MF_01819,NF008565,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023209_35	UniRef90_U2R3K7	96.3	2.56e-23	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0023209_35	1226322.HMPREF1545_00148	96.3	4.29e-24	Transcriptional	N/A
Pfam	UHGV-0023209_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0023209_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0023209_35	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023209_36	UniRef90_A0A1C7FQD9	67.0	0.000000000000509	Transcriptional regulator	N/A
structural_annotation	UHGV-0023209_36	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023209_37	PF21166	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0023209_38	760568.Desku_0919	100.0	1.69e-23	N/A	N/A
structural_annotation	UHGV-0023209_38	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023209_41	UniRef90_A0A098GES5	108.0	1.07e-28	Putative phage associated protein	N/A
structural_annotation	UHGV-0023209_41	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_44	phrog_997	111.5	5.9e-33	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023209_44	UniRef90_R6MCS9	112.0	1.47e-29	N/A	N/A
eggNOG-mapper	UHGV-0023209_44	1519439.JPJG01000059_gene1910	147.0	4.2039e-44	N/A	N/A
PHROG	UHGV-0023209_45	phrog_1029	142.3	2.7003e-42	N/A	unknown function
UniRef90	UHGV-0023209_45	UniRef90_S0FWV2	101.0	2.36e-22	Phage-like protein	N/A
eggNOG-mapper	UHGV-0023209_45	552398.HMPREF0866_01625	125.0	1.4e-32	N/A	N/A
structural_annotation	UHGV-0023209_45	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_46	phrog_253	66.0	6.8e-19	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023209_46	UniRef90_A0A1C5N4H2	120.0	1.23e-31	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-0023209_46	1410670.JHXF01000015_gene2268	107.0	3.16e-27	Siphovirus Gp157	N/A
Pfam	UHGV-0023209_46	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0023209_46	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_47	phrog_7838	137.2	9.60002e-41	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023209_47	UniRef90_A0A8D9UGW3	203.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0023209_47	742767.HMPREF9456_02052	169.0	0	N/A	N/A
structural_annotation	UHGV-0023209_47	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_48	phrog_398	178.8	0	N/A	unknown function
UniRef90	UHGV-0023209_48	UniRef90_UPI00137B6F1E	303.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0023209_48	1485543.JMME01000021_gene802	198.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0023209_48	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0023209_48	PF16784	N/A	N/A	N/A	N/A
KOfam	UHGV-0023209_49	K03111	132.7	4.5e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0023209_49	phrog_44	143.6	1.19951e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023209_49	UniRef90_A0A1Q6R0X3	180.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0023209_49	411467.BACCAP_02389	171.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0023209_49	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0023209_49	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0023209_49	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0023209_49	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0023209_49	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_50	phrog_15768	116.4	4.6e-35	N/A	unknown function
UniRef90	UHGV-0023209_50	UniRef90_UPI001959E913	140.0	5.99e-38	N/A	N/A
eggNOG-mapper	UHGV-0023209_50	642492.Clole_0946	92.0	6.86e-20	DnaD domain protein	N/A
AcrCatalog	UHGV-0023209_50	cluster_38323	82.0	9.52e-21	NA	N/A
Pfam	UHGV-0023209_50	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0023209_50	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0023209_50	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_51	phrog_190	119.7	2.2e-35	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023209_51	UniRef90_A0A417W6H7	117.0	1.74e-31	N/A	N/A
eggNOG-mapper	UHGV-0023209_51	106648.BBLJ01000054_gene3803	84.7	1.3e-19	N/A	N/A
Pfam	UHGV-0023209_51	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0023209_51	PF06356	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0023209_52	657322.FPR_23130	79.0	2.17e-17	N/A	N/A
Pfam	UHGV-0023209_53	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
KOfam	UHGV-0023209_54	K01449	58.1	1.7e-16	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0023209_54	phrog_30550	189.0	0	N/A	unknown function
UniRef90	UHGV-0023209_54	UniRef90_A0A1Y4W1Z7	148.0	7.78982e-42	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0023209_54	1519439.JPJG01000077_gene920	129.0	1.06e-36	Cell Wall Hydrolase	N/A
Pfam	UHGV-0023209_54	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-0023209_54	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
KOfam	UHGV-0023209_55	K01520	146.5	2.00386e-43	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0023209_55	phrog_135	132.9	1.7e-39	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0023209_55	UniRef90_A0A6A2VG41	203.0	0	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-0023209_55	1282887.AUJG01000016_gene1113	153.0	4.2039e-45	N/A	N/A
Pfam	UHGV-0023209_55	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0023209_55	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0023209_55	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0023209_55	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_57	phrog_36	44.5	0.0000000000029	transcriptional regulator	transcription regulation
UniRef90	UHGV-0023209_57	UniRef90_UPI001C10AB33	89.7	4.17e-20	N/A	N/A
structural_annotation	UHGV-0023209_57	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0023209_58	K00571	123.7	2.1e-36	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0023209_58	phrog_498	447.9	0	DNA methyltransferase	other
UniRef90	UHGV-0023209_58	UniRef90_A0A101WI32	500.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0023209_58	742823.HMPREF9465_00225	436.0	0	PFAM DNA methylase N-4 N-6	N/A
PADLOC	UHGV-0023209_58	MTase_II_00015	402.1	0	Type II methyltransferase	RM
Pfam	UHGV-0023209_58	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0023209_58	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0023209_58	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0023209_58	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0023209_60	K06909	125.4	6e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0023209_60	phrog_10250	196.8	0	N/A	unknown function
UniRef90	UHGV-0023209_60	UniRef90_A0A3D3Y0N9	517.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0023209_60	1226322.HMPREF1545_00043	487.0	0	Phage terminase large subunit	N/A
NCBIFam	UHGV-0023209_60	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0023209_60	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0023209_60	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0023209_61	phrog_64	173.8	0	portal protein	head and packaging
UniRef90	UHGV-0023209_61	UniRef90_A0A856HZB4	553.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0023209_61	1035196.HMPREF9998_01723	87.4	0.00000000000000109	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0023209_61	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0023209_61	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0023209	Yes	37,757	58	100	1