vOTU vOTU-043518

vOTU: vOTU-043518

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043518
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00118 → vSUBFAM-02039 → vGENUS-05063 → vSUBGEN-12622 → vOTU-043518
Host lineage	Bacteria → Firmicutes_A → Clostridia → UMGS1810 → UMGS1810 → RGIG4708 → ERR7746465_bin.39
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0027991
Biosample ID	SAMEA4766416
Genome length (bp)	38,312 bps
CheckV completeness	100.00% (Complete)
CDS count	71
CDS density	91.77%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → UMGS1810 → UMGS1810 → RGIG4708 → ERR7746465_bin.39	Total connections	4	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0027991_2	phrog_3366	63.7	3.7e-18	N/A	unknown function
PHROG	UHGV-0027991_3	phrog_541	49.5	0.000000000000077	head-tail adaptor	connector
PHROG	UHGV-0027991_4	phrog_390	74.1	1.7e-21	Arc-like repressor	transcription regulation
UniRef90	UHGV-0027991_4	UniRef90_A0A3N5YZ51	79.7	4.2e-18	Rho termination protein	N/A
eggNOG-mapper	UHGV-0027991_4	1197953.I6T7M8_9CAUD	75.1	7.19e-17	DNA-dependent transcription, termination	N/A
PHROG	UHGV-0027991_5	phrog_544	167.7	0	major head protein	head and packaging
UniRef90	UHGV-0027991_5	UniRef90_A0A6B9SRJ5	366.0	0	Putative head protein	N/A
eggNOG-mapper	UHGV-0027991_5	1347392.CCEZ01000005_gene1236	219.0	0	N/A	N/A
structural_annotation	UHGV-0027991_5	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027991_6	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_7	phrog_533	77.6	1.1e-22	portal protein	head and packaging
structural_annotation	UHGV-0027991_7	PF05133,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0027991_8	K06909	82.3	6.4e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0027991_8	phrog_2	120.4	2.3e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0027991_8	UniRef90_R5GI85	248.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0027991_8	1329516.JPST01000014_gene657	187.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0027991_8	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0027991_8	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0027991_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0027991_8	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027991_12	UniRef90_A0A4V2SE35	49.3	0.00000425	DNA-binding XRE family transcriptional regulator	N/A
Pfam	UHGV-0027991_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027991_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0027991_15	phrog_2872	246.0	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027991_15	UniRef90_A0A8J6JIF1	271.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0027991_15	754027.HMPREF9554_00709	225.0	0	N/A	N/A
Pfam	UHGV-0027991_15	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0027991_15	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_17	phrog_18107	79.9	3.2e-23	N/A	unknown function
UniRef90	UHGV-0027991_17	UniRef90_A0A412CGY7	105.0	1.95e-25	N/A	N/A
eggNOG-mapper	UHGV-0027991_17	1200557.JHWV01000001_gene292	78.6	0.00000000000000131	N/A	N/A
structural_annotation	UHGV-0027991_17	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_18	phrog_19106	211.2	0	N/A	unknown function
UniRef90	UHGV-0027991_18	UniRef90_UPI000E404AB1	182.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0027991_18	658655.HMPREF0988_00875	182.0	0	N/A	N/A
Pfam	UHGV-0027991_18	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
structural_annotation	UHGV-0027991_18	TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-0027991_22	K02316	76.9	3.1e-22	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0027991_22	phrog_11992	142.1	3.80032e-42	N/A	unknown function
UniRef90	UHGV-0027991_22	UniRef90_A0A1G9M235	118.0	1.74e-29	CHC2 zinc finger	N/A
eggNOG-mapper	UHGV-0027991_22	1514668.JOOA01000002_gene2050	114.0	2.31e-29	CHC2 zinc finger domain protein	N/A
PADLOC	UHGV-0027991_22	drt-cluster192	51.0	0.000000000000033	DRT	DRT
Pfam	UHGV-0027991_22	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0027991_22	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0027991_22	PF01807	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027991_23	1203606.HMPREF1526_00240	130.0	1.81e-38	N/A	N/A
structural_annotation	UHGV-0027991_23	PF18419	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_24	phrog_256	347.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027991_24	UniRef90_A0A1V5XFC1	456.0	0	Virulence-associated protein E	N/A
eggNOG-mapper	UHGV-0027991_24	397290.C810_05176	241.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0027991_24	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0027991_24	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0027991_24	PF05272,MF_00016,NF005477,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_27	phrog_27471	93.5	1e-27	N/A	unknown function
UniRef90	UHGV-0027991_27	UniRef90_A0A7S6R6X1	73.2	0.0000000000000361	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0027991_27	1327982.R9ZYM1_9CAUD	139.0	1.09e-40	N/A	N/A
PHROG	UHGV-0027991_31	phrog_8684	55.9	8.3e-16	N/A	unknown function
UniRef90	UHGV-0027991_31	UniRef90_A0A416D4S3	87.8	7.78e-20	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0027991_31	768486.EHR_02675	55.8	0.000000018	YopX protein	N/A
Pfam	UHGV-0027991_31	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0027991_31	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
PHROG	UHGV-0027991_32	phrog_10714	43.0	0.0000000000071	N/A	unknown function
eggNOG-mapper	UHGV-0027991_32	1120998.AUFC01000030_gene2222	53.1	0.0000000768	N/A	N/A
structural_annotation	UHGV-0027991_39	PF08207	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_44	phrog_478	120.0	1.1e-35	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0027991_44	UniRef90_A0A373Q857	183.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0027991_44	478749.BRYFOR_08526	88.6	7.45e-21	N/A	N/A
structural_annotation	UHGV-0027991_46	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_47	phrog_20016	145.4	1.49939e-43	N/A	unknown function
eggNOG-mapper	UHGV-0027991_47	1226322.HMPREF1545_00077	122.0	6.52e-34	N/A	N/A
structural_annotation	UHGV-0027991_47	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_48	phrog_16490	75.4	4.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0027991_48	476272.RUMHYD_01770	108.0	3.73e-26	N/A	N/A
PHROG	UHGV-0027991_49	phrog_22984	60.5	2.8e-17	N/A	unknown function
PHROG	UHGV-0027991_50	phrog_21718	92.7	3.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0027991_50	476272.RUMHYD_01768	68.2	0.00000000000332	N/A	N/A
PHROG	UHGV-0027991_51	phrog_3754	93.3	2.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0027991_51	1226322.HMPREF1545_00073	143.0	1.04957e-42	N/A	N/A
UniRef90	UHGV-0027991_53	UniRef90_A0A843IZ65	90.9	1.4e-22	Sigma70_r4 domain-containing protein	N/A
structural_annotation	UHGV-0027991_53	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_55	phrog_1129	70.3	1.8e-20	holin	lysis
UniRef90	UHGV-0027991_55	UniRef90_A0A1M6MLQ1	132.0	1.3e-38	Phage holin family Hol44, holin superfamily V	N/A
eggNOG-mapper	UHGV-0027991_55	1449050.JNLE01000003_gene3454	124.0	2.52e-36	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0027991_55	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0027991_55	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0027991_56	K08640	100.0	2.7e-29	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0027991_56	phrog_894	109.6	2.7e-32	endolysin	lysis
eggNOG-mapper	UHGV-0027991_56	657322.FPR_27200	134.0	8.13e-36	Peptidase M15A	N/A
Pfam	UHGV-0027991_56	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-0027991_56	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0027991_56	COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_58	phrog_134	51.7	0.000000000000011	N/A	unknown function
UniRef90	UHGV-0027991_58	UniRef90_A0A4Y7WZX0	47.0	0.0000051	XkdX family protein	N/A
Pfam	UHGV-0027991_58	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0027991_58	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
PHROG	UHGV-0027991_60	phrog_5302	241.5	0	tail protein	tail
eggNOG-mapper	UHGV-0027991_60	411470.RUMGNA_00248	239.0	0	Phage tail-collar fibre protein	N/A
COG	UHGV-0027991_60	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0027991_63	phrog_18725	42.0	0.000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0027991_63	1120746.CCNL01000014_gene2212	53.9	0.000000379	N/A	N/A
PHROG	UHGV-0027991_64	phrog_13879	166.5	0	N/A	unknown function
UniRef90	UHGV-0027991_64	UniRef90_A0A3T1D2N8	64.3	0.000000471	LAM_G_DOMAIN domain-containing protein	N/A
eggNOG-mapper	UHGV-0027991_64	1226322.HMPREF1545_00061	186.0	0	N/A	N/A
structural_annotation	UHGV-0027991_64	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027991_65	411902.CLOBOL_00125	63.2	0.0000000000757	N/A	N/A
structural_annotation	UHGV-0027991_65	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0027991_66	K20361	42.2	0.0000000000041	USO1; intracellular protein transport protein USO1	N/A
PHROG	UHGV-0027991_66	phrog_31409	137.7	9.10003e-41	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0027991_66	1414720.CBYM010000002_gene562	118.0	2.9e-24	phage tail tape measure protein	N/A
COG	UHGV-0027991_66	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027991_66	PF11172	N/A	N/A	N/A	N/A
PHROG	UHGV-0027991_67	phrog_706	83.0	3.9e-24	N/A	unknown function
UniRef90	UHGV-0027991_67	UniRef90_UPI00164D7633	110.0	4.86e-27	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0027991_67	665956.HMPREF1032_03058	117.0	2.21e-30	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0027991_67	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0027991_67	PF06854	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027991_69	665956.HMPREF1032_03060	68.2	0.00000000000685	N/A	N/A
structural_annotation	UHGV-0027991_69	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027991_70	PF11114	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0027991	Yes	38,312	39	100	1
UHGV-0024211	No	38,312	39	100	1