vOTU vOTU-043586

vOTU: vOTU-043586

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043586
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00200 → vGENUS-01453 → vSUBGEN-01215 → vOTU-043586
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0024814
Biosample ID	SAMEA4766387
Genome length (bp)	33,220 bps
CheckV completeness	100.00% (Complete)
CDS count	48
CDS density	93.12%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	130	Host agreement	93.08
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900551995	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0024814_1	phrog_10	130.9	1.1e-38	major head protein	head and packaging
UniRef90	UHGV-0024814_1	UniRef90_G9YSC0	560.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0024814_1	349161.Dred_2604	361.0	0	Phage capsid family	N/A
Pfam	UHGV-0024814_1	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0024814_1	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0024814_1	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0024814_1	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0024814_2	K01358	131.1	1.1e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0024814_2	phrog_94	248.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0024814_2	UniRef90_A0A1Y4BT12	349.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0024814_2	349161.Dred_2605	301.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0024814_2	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0024814_2	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0024814_2	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_3	phrog_12	119.8	7.3e-36	portal protein	head and packaging
UniRef90	UHGV-0024814_3	UniRef90_UPI0018755FA4	509.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0024814_3	610130.Closa_0742	296.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0024814_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0024814_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0024814_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0024814_3	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_4	phrog_9	246.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0024814_4	UniRef90_UPI0018737C02	901.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0024814_4	1235792.C808_00083	597.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0024814_4	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0024814_4	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0024814_4	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0024814_4	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_5	phrog_5110	60.5	1.8e-17	terminase small subunit	head and packaging
UniRef90	UHGV-0024814_5	UniRef90_UPI00195E8788	124.0	3.32e-33	P27 family phage terminase small subunit	N/A
Pfam	UHGV-0024814_5	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0024814_5	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0024814_6	K03497	44.4	0.0000000000017	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0024814_6	phrog_21498	272.9	0	N/A	unknown function
UniRef90	UHGV-0024814_6	UniRef90_A0A7X2P836	292.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0024814_6	469378.Ccur_02830	272.0	0	DNA binding	N/A
PADLOC	UHGV-0024814_6	MTase_II_00015	88.2	1e-25	Type II methyltransferase	RM
Pfam	UHGV-0024814_6	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0024814_6	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0024814_6	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_7	phrog_119	70.9	1.6e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024814_7	UniRef90_G9YSB5	152.0	1.4013e-45	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0024814_7	1235792.C808_00081	82.4	7.99e-19	HNH nucleases	N/A
Pfam	UHGV-0024814_7	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0024814_7	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0024814_8	UniRef90_UPI001F232519	75.1	1.93e-16	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0024814_8	1226322.HMPREF1545_00110	68.9	0.00000000000000866	Cysteine-rich KTR	N/A
Pfam	UHGV-0024814_8	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0024814_8	PF14205	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_9	phrog_3584	76.9	2.5e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0024814_9	693746.OBV_19950	251.0	0	N/A	N/A
structural_annotation	UHGV-0024814_9	PF21578,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024814_13	UniRef90_UPI001C8BADAA	50.4	0.00000144	tetraspanin family protein	N/A
KOfam	UHGV-0024814_19	K03497	82.7	6.9e-24	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0024814_19	phrog_27290	360.5	0	N/A	unknown function
UniRef90	UHGV-0024814_19	UniRef90_UPI0003130F10	302.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0024814_19	1007096.BAGW01000033_gene1613	302.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0024814_19	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0024814_19	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0024814_19	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
KOfam	UHGV-0024814_20	K03496	172.0	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0024814_20	phrog_164	131.3	7.2e-39	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024814_20	UniRef90_UPI000318E277	267.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0024814_20	1007096.BAGW01000033_gene1614	257.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0024814_20	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0024814_20	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0024814_20	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0024814_21	K02314	257.7	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0024814_21	phrog_19	215.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024814_21	UniRef90_UPI00195856D7	386.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0024814_21	1226322.HMPREF1545_00095	246.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0024814_21	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0024814_21	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0024814_21	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0024814_21	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_22	phrog_270	109.1	5.3e-32	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024814_22	UniRef90_UPI001F170B82	176.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0024814_22	742738.HMPREF9460_00851	170.0	0	Helix-turn-helix domain	N/A
Pfam	UHGV-0024814_22	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0024814_22	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0024814_22	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_24	phrog_6499	121.6	3.1e-36	transcriptional regulator	transcription regulation
UniRef90	UHGV-0024814_24	UniRef90_G9YL68	141.0	3.59e-40	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0024814_24	742738.HMPREF9460_00847	141.0	4.19997e-41	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0024814_24	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0024814_24	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0024814_24	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0024814_25	K22300	55.5	0.0000000000000013	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0024814_25	phrog_3	42.7	0.000000000021	transcriptional repressor	transcription regulation
UniRef90	UHGV-0024814_25	UniRef90_UPI000F0D19B9	63.2	0.00000000000979	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0024814_25	1125712.HMPREF1316_2427	53.9	0.000000112	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0024814_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0024814_25	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0024814_25	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0024814_28	K02342	143.5	1.49939e-42	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0024814_28	phrog_192	134.2	6.89999e-40	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024814_28	UniRef90_UPI001873C260	148.0	4.04e-38	3'-5' exoribonuclease	N/A
eggNOG-mapper	UHGV-0024814_28	655812.HMPREF0061_0582	127.0	1.19e-31	EXOIII	N/A
PADLOC	UHGV-0024814_28	cd06127	111.1	1.7e-32	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0024814_28	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0024814_28	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0024814_28	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0024814_28	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
KOfam	UHGV-0024814_30	K14059	147.3	1.69557e-43	int; integrase	N/A
PHROG	UHGV-0024814_30	phrog_1	150.8	9.80909e-45	integrase	integration and excision
UniRef90	UHGV-0024814_30	UniRef90_UPI001EDEB0AD	276.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0024814_30	1226322.HMPREF1545_00144	243.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0024814_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0024814_30	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0024814_30	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_31	phrog_9589	90.6	2.9e-26	endolysin	lysis
UniRef90	UHGV-0024814_31	UniRef90_A0A8D9PDX2	242.0	0	MurNAc-LAA protein	N/A
eggNOG-mapper	UHGV-0024814_31	552398.HMPREF0866_03091	149.0	1.79e-39	CHAP domain	N/A
Pfam	UHGV-0024814_31	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0024814_31	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0024814_31	PF01520,PF01471,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_32	phrog_1129	72.1	5e-21	holin	lysis
UniRef90	UHGV-0024814_32	UniRef90_A0A1Q6RI18	125.0	1.44e-35	Enolase	N/A
eggNOG-mapper	UHGV-0024814_32	1226322.HMPREF1545_00069	129.0	3.92e-38	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0024814_32	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0024814_32	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_33	phrog_1863	64.6	8.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0024814_33	748224.HMPREF9436_00408	94.0	1.97e-24	N/A	N/A
PHROG	UHGV-0024814_35	phrog_24451	48.6	0.00000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0024814_35	1408437.JNJN01000040_gene189	134.0	4.55e-39	N/A	N/A
eggNOG-mapper	UHGV-0024814_36	2754.EH55_00535	65.5	0.0000000107	N/A	N/A
structural_annotation	UHGV-0024814_36	PF10651,PF04862,TIGR04362,COG5513	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024814_37	PF17642	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_38	phrog_1067	299.7	0	minor head protein	head and packaging
UniRef90	UHGV-0024814_38	UniRef90_A0A316NPB5	502.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0024814_38	1123263.AUKY01000068_gene489	349.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0024814_38	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0024814_38	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0024814_38	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0024814_38	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_39	phrog_33	83.7	3.5e-24	distal tail protein Dit	tail
UniRef90	UHGV-0024814_39	UniRef90_A0A2X2UUQ3	163.0	0	Phage putative tail component	N/A
eggNOG-mapper	UHGV-0024814_39	994573.T472_0211980	99.0	1.89e-22	tail component	N/A
COG	UHGV-0024814_39	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0024814_39	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_40	phrog_58	90.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0024814_40	UniRef90_A0A1Y4R6K5	174.0	8.72028e-42	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0024814_40	1140001.I571_01843	193.0	0	phage tail tape measure protein	N/A
COG	UHGV-0024814_40	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0024814_40	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_43	phrog_88	98.5	6.8e-29	major tail protein	tail
UniRef90	UHGV-0024814_43	UniRef90_A0A1C6CIL7	135.0	1.38e-35	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0024814_43	33035.JPJF01000039_gene278	73.6	0.00000000000021	N/A	N/A
NCBIFam	UHGV-0024814_43	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0024814_43	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_44	phrog_5	45.3	0.0000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-0024814_44	UniRef90_R6UNR2	127.0	1.31e-34	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0024814_44	908340.HMPREF9406_2573	127.0	2.2e-35	N/A	N/A
structural_annotation	UHGV-0024814_44	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0024814_45	999413.HMPREF1094_02005	80.1	6.36e-18	N/A	N/A
structural_annotation	UHGV-0024814_45	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_46	phrog_19734	118.1	4.9e-35	N/A	unknown function
UniRef90	UHGV-0024814_46	UniRef90_A0A6I7GNS7	126.0	5.84e-35	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0024814_46	349161.Dred_2602	96.3	4.89e-24	N/A	N/A
structural_annotation	UHGV-0024814_46	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0024814_47	phrog_749	67.9	1.3e-19	N/A	unknown function
UniRef90	UHGV-0024814_47	UniRef90_UPI001C0FB8A8	53.1	0.000000557	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0024814_47	349161.Dred_2603	78.2	1.8e-17	N/A	N/A
UniRef90	UHGV-0024814_48	UniRef90_UPI00085C4B45	73.6	0.00000000000000809	cadherin-like beta sandwich domain-containing protein	N/A
eggNOG-mapper	UHGV-0024814_48	316067.Geob_3347	77.8	0.00000000000000445	regulator of chromosome condensation, RCC1	N/A
Pfam	UHGV-0024814_48	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
COG	UHGV-0024814_48	COG5184	N/A	N/A	Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0024814	Yes	33,220	60	100	1
UHGV-0034863	No	36,440	59	100	1
UHGV-0021934	No	31,068	60	91	1