vOTU vOTU-043597

vOTU: vOTU-043597

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043597
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00124 → vSUBFAM-00555 → vGENUS-00885 → vSUBGEN-04278 → vOTU-043597
Host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → CAG-238
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0024893
Biosample ID	SAMEA4766032
Genome length (bp)	41,044 bps
CheckV completeness	100.00% (Complete)
CDS count	71
CDS density	91.79%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → CAG-238	Total connections	13	Host agreement	92.31
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter faecis	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0024893_1	K14059	146.6	2.90069e-43	int; integrase	N/A
PHROG	UHGV-0024893_1	phrog_1	172.0	0	integrase	integration and excision
UniRef90	UHGV-0024893_1	UniRef90_A0A845QLR8	345.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0024893_1	936375.HMPREF1152_1040	219.0	0	Phage integrase family	N/A
Pfam	UHGV-0024893_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0024893_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0024893_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0024893_2	K06882	67.3	2e-19	N/A	N/A
eggNOG-mapper	UHGV-0024893_2	645991.Sgly_2993	69.7	0.00000000016	cell wall binding repeat 2	N/A
COG	UHGV-0024893_2	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
PHROG	UHGV-0024893_3	phrog_20936	43.2	0.000000000006	N/A	unknown function
UniRef90	UHGV-0024893_3	UniRef90_UPI00164BB8FD	52.0	0.000000314	ImmA/IrrE family metallo-endopeptidase	N/A
Pfam	UHGV-0024893_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0024893_3	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_4	phrog_8	60.5	3.8e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0024893_4	UniRef90_UPI001915FD06	83.2	3.65e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0024893_4	1260356.D920_01819	60.5	0.000000000295	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0024893_4	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0024893_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0024893_4	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0024893_7	K23779	47.2	0.00000000000047	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0024893_7	phrog_8	53.9	0.0000000000000043	transcriptional regulator	transcription regulation
UniRef90	UHGV-0024893_7	UniRef90_A0A8G0M6K7	67.8	0.000000000000127	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0024893_7	12417.Q9T1J3_9CAUD	55.8	0.00000000285	sequence-specific DNA binding	N/A
Pfam	UHGV-0024893_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0024893_7	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024893_8	NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_10	phrog_22529	123.3	1e-36	N/A	unknown function
UniRef90	UHGV-0024893_10	UniRef90_R6EKT9	157.0	1.4013e-45	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0024893_10	877420.ATVW01000029_gene1358	99.0	8.41e-22	3D domain	N/A
Pfam	UHGV-0024893_10	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0024893_10	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0024893_10	PF06725,MF_02071,NF040677,COG3584	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_11	phrog_2113	48.0	0.00000000000013	N/A	unknown function
Pfam	UHGV-0024893_11	PF08279	N/A	N/A	HTH domain	HTH_11
PHROG	UHGV-0024893_13	phrog_7838	142.6	2.79979e-42	exonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0024893_13	742767.HMPREF9456_02397	196.0	0	N/A	N/A
structural_annotation	UHGV-0024893_13	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_14	phrog_434	123.0	2.2e-36	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024893_14	UniRef90_UPI001CF8591D	308.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0024893_14	1122146.AUHP01000010_gene1042	198.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0024893_14	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-0024893_14	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0024893_14	PF10926,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_15	phrog_72	55.0	0.000000000000001	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024893_15	UniRef90_A0A8D9PDS2	124.0	1.22e-32	NinB protein	N/A
eggNOG-mapper	UHGV-0024893_15	445972.ANACOL_01825	145.0	6.65056e-42	N/A	N/A
structural_annotation	UHGV-0024893_15	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_16	phrog_7566	101.8	3.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0024893_16	483218.BACPEC_01171	81.3	1.26e-18	N/A	N/A
KOfam	UHGV-0024893_17	K03111	137.8	1.10001e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0024893_17	phrog_44	130.2	1.5e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024893_17	UniRef90_R6E0A2	195.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0024893_17	883109.HMPREF0380_00268	166.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0024893_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0024893_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0024893_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0024893_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0024893_17	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0024893_18	K01160	40.8	0.000000000052	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0024893_18	phrog_1682	87.1	2.3e-25	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024893_18	UniRef90_R6DSN2	214.0	0	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0024893_18	1120985.AUMI01000019_gene2247	126.0	1.52e-35	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0024893_18	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0024893_18	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_19	phrog_2514	101.0	1.1e-29	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024893_19	UniRef90_UPI001C1E0E19	189.0	0	GntR family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0024893_19	646529.Desaci_3039	142.0	1.94e-38	Transcriptional regulator	N/A
COG	UHGV-0024893_19	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0024893_19	PF08222,NF033788,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0024893_20	K02315	197.0	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0024893_20	phrog_50	180.2	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024893_20	UniRef90_R6DSN6	308.0	0	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0024893_20	1123313.ATUT01000003_gene867	184.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0024893_20	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0024893_20	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0024893_20	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0024893_20	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_22	phrog_757	57.8	1.3e-16	DNA methyltransferase	other
eggNOG-mapper	UHGV-0024893_22	428127.EUBDOL_01513	268.0	0	N/A	N/A
AcrCatalog	UHGV-0024893_22	cluster_47493	171.0	0	NA	N/A
PHROG	UHGV-0024893_24	phrog_6721	200.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0024893_24	665956.HMPREF1032_00655	217.0	0	N/A	N/A
PHROG	UHGV-0024893_25	phrog_6721	55.0	0.0000000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0024893_25	665956.HMPREF1032_00655	65.1	0.00000000000396	N/A	N/A
PHROG	UHGV-0024893_28	phrog_21026	59.4	4.6e-17	N/A	unknown function
PHROG	UHGV-0024893_29	phrog_7314	44.5	0.0000000000029	N/A	unknown function
PHROG	UHGV-0024893_31	phrog_13489	43.3	0.0000000000059	N/A	unknown function
eggNOG-mapper	UHGV-0024893_31	1158601.I585_01174	68.9	0.00000000000009	N/A	N/A
PHROG	UHGV-0024893_35	phrog_25385	70.3	2.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0024893_35	411468.CLOSCI_00565	63.5	0.0000000000686	N/A	N/A
structural_annotation	UHGV-0024893_37	PF18066	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024893_38	PF05263,TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024893_44	NF040976	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_47	phrog_38	349.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0024893_47	UniRef90_A0A845QMQ7	664.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0024893_47	755731.Clo1100_2438	455.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0024893_47	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0024893_47	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0024893_47	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0024893_47	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0024893_47	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_49	phrog_156	75.3	1.7e-22	portal protein	head and packaging
eggNOG-mapper	UHGV-0024893_49	1232449.BAHV02000016_gene1822	414.0	0	N/A	N/A
structural_annotation	UHGV-0024893_49	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_51	phrog_267	83.9	1.6e-24	major head protein	head and packaging
UniRef90	UHGV-0024893_51	UniRef90_A0A7C6CNA9	159.0	1.02295e-43	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0024893_51	665956.HMPREF1032_03906	316.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-0024893_51	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024893_52	PF07100,COG4288	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_54	phrog_3287	84.7	5.8e-25	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0024893_54	1232449.BAHV02000016_gene1816	245.0	0	N/A	N/A
structural_annotation	UHGV-0024893_54	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0024893_56	428125.CLOLEP_00241	65.1	0.0000000263	leucine binding	N/A
Pfam	UHGV-0024893_56	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
Pfam	UHGV-0024893_56	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0024893_56	COG0683	N/A	N/A	ABC-type branched-chain amino acid transport system, periplasmic component	N/A
structural_annotation	UHGV-0024893_56	PF19789,PF14686,TIGR04183,COG2512	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0024893_58	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0024893_58	NF040910	N/A	N/A	N/A	N/A
KOfam	UHGV-0024893_59	K18454	52.3	0.0000000000000081	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-0024893_59	phrog_30034	110.7	1.7e-32	N/A	unknown function
UniRef90	UHGV-0024893_59	UniRef90_A0A2Y9CAD1	141.0	7.31001e-41	Carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0024893_59	411460.RUMTOR_02099	133.0	6.69e-37	N/A	N/A
Pfam	UHGV-0024893_59	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
Pfam	UHGV-0024893_60	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
structural_annotation	UHGV-0024893_60	TIGR02559	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024893_61	UniRef90_A0A845QMU2	583.0	0	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0024893_61	1408437.JNJN01000060_gene452	349.0	0	heme binding	N/A
COG	UHGV-0024893_61	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0024893_61	PF18857,PF18798	N/A	N/A	N/A	N/A
KOfam	UHGV-0024893_62	K08640	68.5	1.7e-19	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0024893_62	phrog_894	55.0	0.0000000000000013	endolysin	lysis
UniRef90	UHGV-0024893_62	UniRef90_A0A3B8P2A9	60.1	0.0000000126	Peptidase M15	N/A
eggNOG-mapper	UHGV-0024893_62	390235.PputW619_1627	55.1	0.000000166	peptidase M15A	N/A
Pfam	UHGV-0024893_62	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0024893_62	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024893_62	PF08291,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_63	phrog_4105	44.5	0.0000000000024	N/A	unknown function
PHROG	UHGV-0024893_65	phrog_6918	52.6	0.0000000000000065	holin	lysis
Pfam	UHGV-0024893_65	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0024893_65	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024893_66	UniRef90_A0A843HPX3	87.8	1.55e-21	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0024893_66	1235790.C805_00057	51.2	0.0000000789	N/A	N/A
structural_annotation	UHGV-0024893_66	PF13404,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0024893_67	phrog_21718	54.6	0.0000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0024893_67	476272.RUMHYD_01768	52.8	0.000000296	N/A	N/A
eggNOG-mapper	UHGV-0024893_69	641112.ACOK01000103_gene525	88.6	5.65e-19	N/A	N/A
structural_annotation	UHGV-0024893_70	PF18573,NF033147	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0024893	Yes	41,044	43	100	1