vOTU vOTU-043645

vOTU: vOTU-043645

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043645
Number of genomes	3
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00017 → vSUBFAM-00712 → vGENUS-11239 → vSUBGEN-15749 → vOTU-043645
Host lineage
Host range breadth
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0025640
Biosample ID	SAMEA4766100
Genome length (bp)	60,413 bps
CheckV completeness	100.00% (Complete)
CDS count	82
CDS density	94.12%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0025640_4	PF00041	N/A	N/A	Fibronectin type III domain	fn3
structural_annotation	UHGV-0025640_4	PF20377	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_5	phrog_1067	363.1	0	minor head protein	head and packaging
UniRef90	UHGV-0025640_5	UniRef90_A0A413DNC1	480.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0025640_5	1160721.RBI_I01574	353.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0025640_5	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0025640_5	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0025640_5	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0025640_5	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_6	phrog_33	59.6	8.8e-17	distal tail protein Dit	tail
UniRef90	UHGV-0025640_6	UniRef90_A0A173Z1X4	259.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0025640_6	1160721.RBI_I01575	138.0	1.91e-37	Phage tail protein	N/A
COG	UHGV-0025640_6	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0025640_6	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_7	phrog_4372	872.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0025640_7	UniRef90_A0A6M5GGC1	1025.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0025640_7	665956.HMPREF1032_00686	967.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0025640_7	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-0025640_7	COG5412	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-0025640_8	UniRef90_A0A3A9JBQ1	201.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0025640_8	428125.CLOLEP_01421	202.0	0	N/A	N/A
structural_annotation	UHGV-0025640_8	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_9	phrog_4338	252.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0025640_9	665950.HMPREF1025_02004	218.0	0	N/A	N/A
PHROG	UHGV-0025640_10	phrog_4282	141.4	4.30058e-42	N/A	unknown function
eggNOG-mapper	UHGV-0025640_10	478749.BRYFOR_08517	112.0	9.08e-30	N/A	N/A
PHROG	UHGV-0025640_11	phrog_2645	342.3	0	major tail protein	tail
UniRef90	UHGV-0025640_11	UniRef90_A0A2U8UI58	286.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0025640_11	742740.HMPREF9474_02267	282.0	0	N/A	N/A
structural_annotation	UHGV-0025640_11	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025640_12	UniRef90_A0A7T0M227	112.0	4.08e-30	Tail terminator	N/A
eggNOG-mapper	UHGV-0025640_12	665956.HMPREF1032_00678	117.0	3.67e-33	N/A	N/A
structural_annotation	UHGV-0025640_12	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_13	phrog_4270	142.8	7.10458e-43	N/A	unknown function
eggNOG-mapper	UHGV-0025640_13	665956.HMPREF1032_00677	155.0	0	N/A	N/A
structural_annotation	UHGV-0025640_13	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
KOfam	UHGV-0025640_15	K06904	62.5	5.8e-18	N/A	N/A
PHROG	UHGV-0025640_15	phrog_3270	734.4	0	head maturation protease	head and packaging
UniRef90	UHGV-0025640_15	UniRef90_A7VS74	853.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0025640_15	428125.CLOLEP_01412	853.0	0	Caudovirus prohead serine protease	N/A
structural_annotation	UHGV-0025640_15	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_16	phrog_11413	85.1	1.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0025640_16	742733.HMPREF9469_05031	73.6	0.000000000000477	N/A	N/A
PHROG	UHGV-0025640_17	phrog_12	124.1	8.2e-37	portal protein	head and packaging
UniRef90	UHGV-0025640_17	UniRef90_UPI001D05DA00	543.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0025640_17	665956.HMPREF1032_00674	544.0	0	Phage portal protein	N/A
Pfam	UHGV-0025640_17	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0025640_17	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025640_18	1121335.Clst_0388	67.4	0.0000000000000389	N/A	N/A
PHROG	UHGV-0025640_19	phrog_32444	56.7	1.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0025640_19	665956.HMPREF1032_00673	213.0	0	N/A	N/A
PHROG	UHGV-0025640_20	phrog_9	241.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0025640_20	UniRef90_UPI001D05F004	1026.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0025640_20	742740.HMPREF9474_02272	1001.0	0	Phage Terminase	N/A
Pfam	UHGV-0025640_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0025640_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0025640_20	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025640_21	UniRef90_A0A090ISP6	123.0	1.11e-32	Putative membrane protein	N/A
eggNOG-mapper	UHGV-0025640_21	35841.BT1A1_0854	123.0	1.86e-33	N/A	N/A
PHROG	UHGV-0025640_22	phrog_7021	89.6	4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0025640_22	742740.HMPREF9474_02273	103.0	1.81e-26	N/A	N/A
PHROG	UHGV-0025640_23	phrog_4247	141.2	2.29953e-42	virion structural protein	head and packaging
UniRef90	UHGV-0025640_23	UniRef90_D4P7C3	124.0	3.56e-34	Structural protein	N/A
eggNOG-mapper	UHGV-0025640_23	428125.CLOLEP_01407	129.0	5.61e-37	N/A	N/A
PHROG	UHGV-0025640_24	phrog_4321	193.0	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0025640_24	428125.CLOLEP_01405	194.0	0	N/A	N/A
PHROG	UHGV-0025640_25	phrog_4259	123.4	7.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-0025640_25	665956.HMPREF1032_00667	98.2	4.44e-25	N/A	N/A
structural_annotation	UHGV-0025640_26	PF00386,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_27	phrog_4303	119.0	1.5e-35	N/A	unknown function
eggNOG-mapper	UHGV-0025640_27	742733.HMPREF9469_05038	117.0	1.35e-33	N/A	N/A
PHROG	UHGV-0025640_28	phrog_4291	1278.2	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025640_28	UniRef90_G9RWL4	1216.0	0	HTH luxR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0025640_28	665956.HMPREF1032_00665	1216.0	0	Bacterial regulatory proteins, luxR family	N/A
Pfam	UHGV-0025640_28	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-0025640_28	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
structural_annotation	UHGV-0025640_28	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_29	phrog_3953	183.3	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025640_29	UniRef90_UPI0011CA75C9	239.0	0	N/A	N/A
eggNOG-mapper	UHGV-0025640_29	742740.HMPREF9474_02279	238.0	0	N/A	N/A
Pfam	UHGV-0025640_29	PF10926	N/A	N/A	N/A	DUF2800
structural_annotation	UHGV-0025640_29	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025640_30	742740.HMPREF9474_02280	114.0	4.14e-32	N/A	N/A
structural_annotation	UHGV-0025640_30	PF01870,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_32	phrog_229	101.1	6.5e-30	MazG-like pyrophosphatase	other
eggNOG-mapper	UHGV-0025640_32	665956.HMPREF1032_00660	112.0	4.36e-28	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0025640_32	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0025640_32	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0025640_32	PF12643,MF_01019,NF002747,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_35	phrog_3392	132.1	4.9e-39	N/A	unknown function
UniRef90	UHGV-0025640_35	UniRef90_A0A1K1KSW2	115.0	2.11e-30	N/A	N/A
eggNOG-mapper	UHGV-0025640_35	1308863.U5J9Q1_9CAUD	118.0	5.99e-32	N/A	N/A
PHROG	UHGV-0025640_36	phrog_24386	283.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0025640_36	478749.BRYFOR_08546	239.0	0	UMP catabolic process	N/A
COG	UHGV-0025640_36	COG0647	N/A	N/A	Ribonucleotide monophosphatase NagD, HAD superfamily	N/A
PHROG	UHGV-0025640_39	phrog_6721	155.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0025640_39	665956.HMPREF1032_00655	297.0	0	N/A	N/A
structural_annotation	UHGV-0025640_39	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025640_40	428125.CLOLEP_01384	82.0	4.38e-19	N/A	N/A
eggNOG-mapper	UHGV-0025640_46	1095770.CAHE01000088_gene1822	99.4	6.27e-25	N/A	N/A
KOfam	UHGV-0025640_47	K00942	71.3	1.5e-20	gmk, GUK1; guanylate kinase [EC:2.7.4.8]	N/A
PHROG	UHGV-0025640_47	phrog_1815	131.6	6.9e-39	guanylate kinase	other
UniRef90	UHGV-0025640_47	UniRef90_A0A350TI94	149.0	1.22053e-42	GuKc domain-containing protein	N/A
eggNOG-mapper	UHGV-0025640_47	431943.CKL_2842	105.0	3.83e-26	Guanylate kinase	N/A
Pfam	UHGV-0025640_47	PF00625	N/A	N/A	Guanylate kinase	Guanylate_kin
COG	UHGV-0025640_47	COG0194	N/A	N/A	Guanylate kinase	N/A
structural_annotation	UHGV-0025640_47	PF00625,MF_00328,NF011324,COG0194	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_50	phrog_38339	140.5	1.10002e-41	N/A	unknown function
UniRef90	UHGV-0025640_50	UniRef90_U2QNH6	140.0	3.45e-38	Hydrolase_2 domain-containing protein	N/A
structural_annotation	UHGV-0025640_50	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_51	phrog_62	156.8	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025640_51	UniRef90_UPI001D08DE3D	595.0	0	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-0025640_51	742740.HMPREF9474_02299	545.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-0025640_51	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0025640_51	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_52	phrog_19852	66.9	2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0025640_52	742740.HMPREF9474_02297	55.1	0.000000000964	N/A	N/A
PHROG	UHGV-0025640_54	phrog_4787	141.7	2.49992e-42	single strand annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0025640_54	428125.CLOLEP_01377	135.0	2.94e-38	N/A	N/A
structural_annotation	UHGV-0025640_54	PF21265,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-0025640_55	K02319	47.1	2.2e-16	pol; DNA polymerase, archaea type [EC:2.7.7.7]	N/A
PHROG	UHGV-0025640_55	phrog_4210	1943.2	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025640_55	UniRef90_G9RWJ6	1803.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0025640_55	665956.HMPREF1032_00647	1803.0	0	DNA polymerase type-B family	N/A
Pfam	UHGV-0025640_55	PF19263	N/A	N/A	N/A	DUF5906
structural_annotation	UHGV-0025640_55	PF00136,PF05272,PF10991,PF09250,MF_04100,MF_00016,NF011296,TIGR00592,COG3378,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_57	phrog_4678	179.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0025640_57	742740.HMPREF9474_02306	200.0	0	N/A	N/A
PHROG	UHGV-0025640_58	phrog_4695	117.7	6.7e-35	N/A	unknown function
UniRef90	UHGV-0025640_58	UniRef90_UPI001D08D232	99.4	1.71e-22	YtxH domain-containing protein	N/A
eggNOG-mapper	UHGV-0025640_58	742740.HMPREF9474_02307	124.0	8.61e-33	N/A	N/A
PHROG	UHGV-0025640_59	phrog_14968	74.0	1.1e-21	N/A	unknown function
UniRef90	UHGV-0025640_59	UniRef90_A0A3A9JBK4	60.8	0.0000000000296	Histidine kinase	N/A
eggNOG-mapper	UHGV-0025640_59	411460.RUMTOR_02031	62.0	0.00000000000173	N/A	N/A
PHROG	UHGV-0025640_60	phrog_2152	271.3	0	N/A	unknown function
UniRef90	UHGV-0025640_60	UniRef90_UPI00156DA7B3	247.0	0	N/A	N/A
eggNOG-mapper	UHGV-0025640_60	742740.HMPREF9474_02310	237.0	0	N/A	N/A
Pfam	UHGV-0025640_60	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0025640_60	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_61	phrog_4079	178.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0025640_61	742733.HMPREF9469_05076	146.0	8.00982e-42	N/A	N/A
PHROG	UHGV-0025640_62	phrog_15567	103.5	7.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0025640_62	428125.CLOLEP_01364	77.0	4.04e-18	N/A	N/A
structural_annotation	UHGV-0025640_62	MF_00273,NF001981	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_65	phrog_2152	225.8	0	N/A	unknown function
UniRef90	UHGV-0025640_65	UniRef90_UPI0011CA98EE	229.0	0	N/A	N/A
eggNOG-mapper	UHGV-0025640_65	742740.HMPREF9474_02314	224.0	0	N/A	N/A
Pfam	UHGV-0025640_65	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0025640_65	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_67	phrog_2152	148.8	2.94273e-44	N/A	unknown function
UniRef90	UHGV-0025640_67	UniRef90_UPI00195869ED	155.0	2.02067e-42	N/A	N/A
eggNOG-mapper	UHGV-0025640_67	665956.HMPREF1032_00632	133.0	7.64e-35	N/A	N/A
Pfam	UHGV-0025640_67	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0025640_67	PF19880	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025640_68	428125.CLOLEP_01355	45.8	0.00000428	N/A	N/A
PHROG	UHGV-0025640_69	phrog_17256	185.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0025640_69	665950.HMPREF1025_01937	162.0	0	N/A	N/A
PHROG	UHGV-0025640_74	phrog_11237	106.0	2.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-0025640_74	411460.RUMTOR_02009	120.0	5.17e-33	N/A	N/A
PHROG	UHGV-0025640_75	phrog_6058	83.4	1.4e-24	N/A	unknown function
UniRef90	UHGV-0025640_75	UniRef90_A0A4Q7P3C7	134.0	1.23e-39	Prolyl-tRNA synthetase	N/A
eggNOG-mapper	UHGV-0025640_75	665956.HMPREF1032_00623	139.0	4.33001e-42	N/A	N/A
KOfam	UHGV-0025640_76	K14059	86.1	5.8e-25	int; integrase	N/A
PHROG	UHGV-0025640_76	phrog_1	139.2	3.80004e-41	integrase	integration and excision
UniRef90	UHGV-0025640_76	UniRef90_UPI0011CBA66B	570.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0025640_76	428125.CLOLEP_01345	548.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0025640_76	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0025640_76	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0025640_76	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0025640_77	K01447	107.4	1.8e-31	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0025640_77	phrog_670	103.2	3.3e-30	endolysin	lysis
UniRef90	UHGV-0025640_77	UniRef90_A0A1C5QWL7	154.0	5.26047e-42	N-acetylmuramoyl-L-alanine amidase AmiD	N/A
eggNOG-mapper	UHGV-0025640_77	97138.C820_00251	150.0	2.1594e-42	Ami_2	N/A
Pfam	UHGV-0025640_77	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0025640_77	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0025640_77	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0025640_78	phrog_13256	59.1	4.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-0025640_78	1226322.HMPREF1545_00166	65.9	0.000000000000299	N/A	N/A
PHROG	UHGV-0025640_80	phrog_4105	46.4	0.00000000000068	N/A	unknown function
eggNOG-mapper	UHGV-0025640_81	755731.Clo1100_3570	73.2	0.0000000000996	N/A	N/A
KOfam	UHGV-0025640_82	K03651	50.3	0.000000000000033	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
PHROG	UHGV-0025640_82	phrog_7158	49.7	0.0000000000000013	N/A	unknown function
UniRef90	UHGV-0025640_82	UniRef90_A0A1I1Z9R5	100.0	4.83e-19	Calcineurin-like phosphoesterase	N/A
structural_annotation	UHGV-0025640_82	PF13350,PF18998,PF17425,COG2365	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0025640	Yes	60,413	47	100	1
UHGV-0012634	No	60,867	48	97	1
UHGV-0016821	No	38,089	47	61	1