vOTU vOTU-043685

vOTU: vOTU-043685

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043685
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-01196 → vGENUS-06653 → vSUBGEN-32995 → vOTU-043685
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0026070
Biosample ID	N/A
Genome length (bp)	41,250 bps
CheckV completeness	100.00% (Complete)
CDS count	63
CDS density	89.67%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia	Total connections	88	Host agreement	93.18
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0026070_6	PF10013,NF001638,COG4338	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026070_7	UniRef90_UPI001C01A488	151.0	3.22299e-44	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0026070_7	561177.ANHYDRO_01396	76.3	0.00000000000000128	Endodeoxyribonuclease RusA	N/A
COG	UHGV-0026070_7	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0026070_7	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026070_8	UniRef90_A0A4D7ASB8	323.0	0	N/A	N/A
eggNOG-mapper	UHGV-0026070_8	693746.OBV_01680	342.0	0	N/A	N/A
structural_annotation	UHGV-0026070_8	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026070_9	693746.OBV_01730	73.6	0.00000000000000984	N/A	N/A
structural_annotation	UHGV-0026070_9	PF11650	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026070_11	1410650.JHWL01000003_gene2814	73.2	0.00000000129	N/A	N/A
PHROG	UHGV-0026070_12	phrog_15863	48.3	2.8e-19	N/A	unknown function
UniRef90	UHGV-0026070_12	UniRef90_UPI00068FC51E	366.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0026070_12	1519439.JPJG01000053_gene1369	366.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-0026070_12	PF18847	N/A	N/A	Large polyvalent protein associated domain 29	LPD29
COG	UHGV-0026070_12	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0026070_13	NF040976	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026070_15	411469.EUBHAL_01483	55.1	0.0000000358	Cysteine-rich KTR	N/A
Pfam	UHGV-0026070_15	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
KOfam	UHGV-0026070_16	K06909	148.1	7.56701e-44	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0026070_16	phrog_979	147.3	2.8026e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0026070_16	UniRef90_A0A6A8VHX7	493.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0026070_16	693746.OBV_01690	480.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0026070_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0026070_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0026070_16	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0026070_18	phrog_422	118.9	3.6e-35	major head protein	head and packaging
UniRef90	UHGV-0026070_18	UniRef90_A0A2V2DLC4	198.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0026070_18	315749.Bcer98_2943	138.0	1.1e-35	N/A	N/A
Pfam	UHGV-0026070_18	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0026070_18	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0026070_20	phrog_156	125.6	1.3e-37	portal protein	head and packaging
eggNOG-mapper	UHGV-0026070_20	693746.OBV_01670	496.0	0	N/A	N/A
structural_annotation	UHGV-0026070_20	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026070_21	931626.Awo_c30920	58.2	0.000000215	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-0026070_22	PF14686,PF21253,NF040788,COG2512	N/A	N/A	N/A	N/A
KOfam	UHGV-0026070_26	K08640	96.2	5.2e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0026070_26	phrog_894	59.7	4.4e-17	endolysin	lysis
UniRef90	UHGV-0026070_26	UniRef90_R5EEL2	300.0	0	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-0026070_26	931626.Awo_c26840	114.0	3.24e-29	Peptidase M15	N/A
Pfam	UHGV-0026070_26	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0026070_26	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0026070_26	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026070_26	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0026070_27	phrog_937	56.0	7.6e-16	hemolysin	other
eggNOG-mapper	UHGV-0026070_27	1297617.JPJD01000099_gene2176	48.1	0.00000775	N/A	N/A
PHROG	UHGV-0026070_28	phrog_10091	101.9	4.6e-30	holin	lysis
UniRef90	UHGV-0026070_28	UniRef90_D7GNX3	130.0	5.18e-38	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-0026070_28	97139.C824_05950	119.0	4.13e-34	Bacteriophage holin	N/A
Pfam	UHGV-0026070_28	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0026070_28	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0026070_28	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026070_28	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026070_29	PF01047,NF001066,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0026070_33	K14059	149.6	3.50325e-44	int; integrase	N/A
PHROG	UHGV-0026070_33	phrog_1	150.0	1.82169e-44	integrase	integration and excision
UniRef90	UHGV-0026070_33	UniRef90_A0A3D2HVQ9	625.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0026070_33	742738.HMPREF9460_01344	159.0	7.553e-43	Phage integrase family	N/A
Pfam	UHGV-0026070_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0026070_33	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0026070_33	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0026070_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0026070_34	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0026070_35	K19167	55.7	0.0000000000000012	abiQ; protein AbiQ	N/A
PHROG	UHGV-0026070_35	phrog_8049	89.1	3.9e-26	N/A	unknown function
UniRef90	UHGV-0026070_35	UniRef90_A0A2S6FUC3	92.4	3.58e-21	Protein AbiQ	N/A
eggNOG-mapper	UHGV-0026070_35	1227268.HMPREF1552_01455	105.0	4.07e-27	N/A	N/A
KOfam	UHGV-0026070_37	K22300	61.0	2.8e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0026070_37	phrog_8	50.1	0.000000000000043	transcriptional regulator	transcription regulation
UniRef90	UHGV-0026070_37	UniRef90_A0A2V2D6D5	108.0	3.74e-28	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0026070_37	1235793.C809_02627	82.4	2.62e-18	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0026070_37	retron_type_VI_hth_cluster2_1	46.4	0.00000000000083	N/A	Retron
Pfam	UHGV-0026070_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0026070_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0026070_37	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026070_40	UniRef90_UPI001655B004	64.3	0.00000000000312	carboxypeptidase	N/A
eggNOG-mapper	UHGV-0026070_40	626523.GCWU000342_01045	60.5	0.0000000000159	N/A	N/A
structural_annotation	UHGV-0026070_41	PF20432,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026070_42	596152.DesU5LDRAFT_1910	99.4	3.88e-23	N/A	N/A
structural_annotation	UHGV-0026070_42	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026070_43	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
PHROG	UHGV-0026070_47	phrog_434	302.1	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026070_47	UniRef90_UPI001D078B74	280.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0026070_47	1121344.JHZO01000003_gene985	277.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0026070_47	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0026070_47	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0026070_47	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0026070_47	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0026070_48	K07455	296.6	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0026070_48	phrog_148	278.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026070_48	UniRef90_U2SBP2	375.0	0	Recombination and repair protein RecT	N/A
eggNOG-mapper	UHGV-0026070_48	1226322.HMPREF1545_00015	375.0	0	RecT family	N/A
Pfam	UHGV-0026070_48	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0026070_48	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0026070_48	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0026070_48	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0026070_49	K03111	139.1	4.49999e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0026070_49	phrog_44	151.5	4.2039e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026070_49	UniRef90_UPI001C118A83	168.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0026070_49	1226322.HMPREF1545_04080	160.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0026070_49	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0026070_49	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0026070_49	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0026070_49	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0026070_49	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0026070_50	phrog_190	114.4	8.5e-34	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026070_50	UniRef90_UPI00164AE2A5	141.0	8.06994e-41	N/A	N/A
eggNOG-mapper	UHGV-0026070_50	1236514.BAKL01000051_gene3708	87.8	9.35e-21	N/A	N/A
Pfam	UHGV-0026070_50	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0026070_50	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0026070_51	phrog_16304	70.8	1.9e-20	N/A	unknown function
UniRef90	UHGV-0026070_51	UniRef90_UPI001D074B07	101.0	1.21e-22	N/A	N/A
eggNOG-mapper	UHGV-0026070_51	690850.Desaf_3579	90.5	1.62e-18	N/A	N/A
AcrCatalog	UHGV-0026070_51	cluster_14472	73.9	2.06e-17	NA	N/A
Pfam	UHGV-0026070_51	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0026070_51	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0026070_52	phrog_9804	150.9	5.60519e-45	N/A	unknown function
UniRef90	UHGV-0026070_52	UniRef90_A0A3D1LDS2	176.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0026070_52	1121344.JHZO01000003_gene981	165.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0026070_52	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0026070_52	PF11417	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026070_54	1123263.AUKY01000096_gene1822	100.0	4.6e-23	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-0026070_54	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0026070_55	phrog_9298	67.7	1.3e-19	radical SAM domain protein	other
UniRef90	UHGV-0026070_55	UniRef90_A0A841L4D7	282.0	0	Radical SAM superfamily enzyme YgiQ (UPF0313 family)	N/A
eggNOG-mapper	UHGV-0026070_55	742817.HMPREF9449_01796	274.0	0	radical SAM domain protein	N/A
COG	UHGV-0026070_55	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0026070_55	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
KOfam	UHGV-0026070_57	K19779	50.9	0.000000000000025	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-0026070_57	phrog_599	56.7	5.5e-16	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0026070_57	UniRef90_D4LDV0	53.5	0.0000000516	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-0026070_57	56780.SYN_03368	46.6	0.00000386	translation initiation factor activity	N/A
Pfam	UHGV-0026070_57	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0026070_57	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0026070_57	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
COG	UHGV-0026070_57	COG1601	N/A	N/A	Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain	N/A
structural_annotation	UHGV-0026070_57	PF14354,NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-0026070_60	phrog_924	51.9	0.000000000000015	N/A	unknown function
UniRef90	UHGV-0026070_60	UniRef90_V4NIV0	52.8	0.0000034	N/A	N/A
Pfam	UHGV-0026070_60	PF04448	N/A	N/A	N/A	DUF551
COG	UHGV-0026070_60	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0026070_60	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0026070_62	phrog_3377	172.4	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0026070_62	1507.HMPREF0262_01169	214.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0026070	Yes	41,250	54	100	1