vOTU vOTU-043712

vOTU: vOTU-043712

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043712
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00118 → vSUBFAM-01094 → vGENUS-06593 → vSUBGEN-30436 → vOTU-043712
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0026390
Biosample ID	SAMEA4766137
Genome length (bp)	54,830 bps
CheckV completeness	100.00% (Complete)
CDS count	89
CDS density	89.98%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0026390_8	1203606.HMPREF1526_00224	71.2	0.0000000000000573	N/A	N/A
eggNOG-mapper	UHGV-0026390_14	742733.HMPREF9469_00925	108.0	1.26e-21	N/A	N/A
KOfam	UHGV-0026390_15	K01258	62.8	4.5e-27	pepT; tripeptide aminopeptidase [EC:3.4.11.4]	N/A
PHROG	UHGV-0026390_15	phrog_34186	142.9	1.90016e-42	N/A	unknown function
UniRef90	UHGV-0026390_15	UniRef90_H1CDP0	214.0	0	Peptidase_M28 domain-containing protein	N/A
eggNOG-mapper	UHGV-0026390_15	411467.BACCAP_03129	194.0	0	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls	N/A
Pfam	UHGV-0026390_15	PF04389	N/A	N/A	Peptidase family M28	Peptidase_M28
COG	UHGV-0026390_15	COG0624	N/A	N/A	Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase	N/A
structural_annotation	UHGV-0026390_15	PF05343,MF_00550,TIGR01883,COG1363	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026390_29	PF14173	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026390_30	PF01157,MF_00369,NF002745,COG2139	N/A	N/A	N/A	N/A
KOfam	UHGV-0026390_31	K18962	61.0	1.4e-17	rnlB; T4 RNA ligase 2 [EC:6.5.1.3]	N/A
PHROG	UHGV-0026390_31	phrog_548	80.0	2.6e-23	RNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026390_31	UniRef90_A0A415ZLT1	239.0	0	RNA_ligase domain-containing protein	N/A
eggNOG-mapper	UHGV-0026390_31	1499967.BAYZ01000036_gene2416	142.0	9.98001e-40	RNA ligase	N/A
Pfam	UHGV-0026390_31	PF09414	N/A	N/A	RNA ligase	RNA_ligase
structural_annotation	UHGV-0026390_31	PF09414,MF_04150,TIGR01209,COG1423	N/A	N/A	N/A	N/A
PHROG	UHGV-0026390_34	phrog_298	94.0	8.7e-28	exonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0026390_34	313596.RB2501_01430	63.5	0.00000000158	Belongs to the helicase family. UvrD subfamily	N/A
COG	UHGV-0026390_34	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0026390_34	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0026390_35	phrog_10048	66.1	1.3e-31	N/A	unknown function
eggNOG-mapper	UHGV-0026390_35	1304880.JAGB01000002_gene2238	111.0	2.75e-27	N/A	N/A
structural_annotation	UHGV-0026390_35	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0026390_37	phrog_3490	98.1	8.4e-29	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026390_37	UniRef90_A0A359MQV2	70.9	0.00000000000429	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0026390_37	1504823.CCMM01000008_gene1063	87.8	1.14e-19	N/A	N/A
Pfam	UHGV-0026390_37	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0026390_37	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0026390_39	phrog_6251	85.8	5.2e-25	replisome organizer DnaA-like	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026390_39	UniRef90_UPI001CBE9731	93.6	4.66e-19	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0026390_39	1340434.AXVA01000005_gene4826	89.7	2.32e-18	Primosome, DnaD subunit	N/A
COG	UHGV-0026390_39	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0026390_39	PF09681,PF07261,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0026390_41	K24451	41.0	0.000000000017	zim; modification methylase	N/A
UniRef90	UHGV-0026390_41	UniRef90_A0A7V6XP83	246.0	0	Site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0026390_41	81824.XP_001747074.1	60.1	0.000000707	adenosine deaminase-like	N/A
COG	UHGV-0026390_41	COG0537	N/A	N/A	Purine nucleoside phosphoramidase/Ap4A hydrolase, histidine triade (HIT) family	N/A
PHROG	UHGV-0026390_43	phrog_986	64.8	1.3e-18	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026390_43	UniRef90_A0A0J1H550	67.4	0.000000000000429	RNA-binding protein	N/A
eggNOG-mapper	UHGV-0026390_43	226185.EF_2118	65.5	0.00000000000448	N/A	N/A
Pfam	UHGV-0026390_43	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-0026390_43	PF12961,MF_00684,NF003443,COG4043	N/A	N/A	N/A	N/A
KOfam	UHGV-0026390_45	K17680	78.0	8.8e-23	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-0026390_45	phrog_19	74.7	1e-21	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0026390_45	500633.CLOHIR_00351	79.7	0.000000000000131	DNA helicase	N/A
COG	UHGV-0026390_45	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0026390_45	PF03796,MF_04154,NF006443,COG0305	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026390_48	1392491.JIAE01000001_gene1921	70.1	0.000000000000603	N/A	N/A
eggNOG-mapper	UHGV-0026390_52	1378168.N510_03079	56.6	0.000000837	N/A	N/A
eggNOG-mapper	UHGV-0026390_53	658655.HMPREF0988_00916	131.0	1.56e-37	N/A	N/A
PHROG	UHGV-0026390_54	phrog_16490	97.8	7.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-0026390_54	658655.HMPREF0988_00917	120.0	1.45e-30	N/A	N/A
PHROG	UHGV-0026390_56	phrog_21718	64.4	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0026390_56	397290.C810_05210	58.9	0.0000000101	N/A	N/A
eggNOG-mapper	UHGV-0026390_58	1235802.C823_01050	95.5	7.82e-23	N/A	N/A
Pfam	UHGV-0026390_59	PF04647	N/A	N/A	Accessory gene regulator B	AgrB
structural_annotation	UHGV-0026390_59	PF08281,NF001067,COG2739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026390_65	PF10127,NF000181,COG3541	N/A	N/A	N/A	N/A
KOfam	UHGV-0026390_67	K01803	271.4	0	TPI, tpiA; triosephosphate isomerase (TIM) [EC:5.3.1.1]	N/A
UniRef90	UHGV-0026390_67	UniRef90_A0A3D2E2F6	361.0	0	Triosephosphate isomerase	N/A
eggNOG-mapper	UHGV-0026390_67	883114.HMPREF9709_00688	182.0	0	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)	N/A
Pfam	UHGV-0026390_67	PF00121	N/A	N/A	Triosephosphate isomerase	TIM
NCBIFam	UHGV-0026390_67	TIGR00419.1	N/A	N/A	triose-phosphate isomerase	N/A
COG	UHGV-0026390_67	COG0149	N/A	N/A	Triosephosphate isomerase	N/A
eggNOG-mapper	UHGV-0026390_74	518635.BIFANG_02133	58.2	0.00000349	hydrolase, family 25	N/A
Pfam	UHGV-0026390_74	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
COG	UHGV-0026390_74	COG3209	N/A	N/A	N/A	N/A
PHROG	UHGV-0026390_75	phrog_28918	51.7	0.0000000000000044	N/A	unknown function
eggNOG-mapper	UHGV-0026390_75	445972.ANACOL_01854	104.0	7.8e-20	tape measure	N/A
COG	UHGV-0026390_75	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0026390_78	phrog_158	53.1	0.0000000000000063	major tail protein	tail
UniRef90	UHGV-0026390_78	UniRef90_D7GNW1	112.0	7.28e-29	Phage tail protein	N/A
eggNOG-mapper	UHGV-0026390_78	1232453.BAIF02000058_gene1634	74.3	0.0000000000000077	N/A	N/A
structural_annotation	UHGV-0026390_78	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0026390_84	phrog_29	169.2	0	major head protein	head and packaging
UniRef90	UHGV-0026390_84	UniRef90_A0A2K9P3U0	219.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-0026390_84	1232443.BAIA02000078_gene29	199.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0026390_84	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0026390_84	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0026390_85	phrog_909	42.6	0.0000000000092	major head protein	head and packaging
PHROG	UHGV-0026390_87	phrog_64	130.5	9.5e-39	portal protein	head and packaging
UniRef90	UHGV-0026390_87	UniRef90_UPI001BAB50B9	151.0	1.2e-36	phage portal protein	N/A
eggNOG-mapper	UHGV-0026390_87	1347392.CCEZ01000005_gene1230	67.4	0.00000000407	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0026390_87	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0026390_87	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0026390_89	phrog_38	104.2	1.1e-30	terminase large subunit	head and packaging
UniRef90	UHGV-0026390_89	UniRef90_A0A1S9I916	73.9	0.000000000341	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0026390_89	428127.EUBDOL_01551	154.0	4.47e-39	chromosome segregation	N/A
COG	UHGV-0026390_89	COG5410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0026390	Yes	54,830	43	100	1
UHGV-0007875	No	50,851	43	96	1