vOTU vOTU-043753

vOTU: vOTU-043753

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043753
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-02510 → vGENUS-03095 → vSUBGEN-36494 → vOTU-043753
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → UMGS363
Host range breadth	Genus
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0026746
Biosample ID	SAMEA4766011
Genome length (bp)	37,297 bps
CheckV completeness	100.00% (Complete)
CDS count	63
CDS density	93.06%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → UMGS363	Total connections	450	Host agreement	99.56
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0026746_1	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_2	phrog_20016	157.0	0	N/A	unknown function
UniRef90	UHGV-0026746_2	UniRef90_A0A2Z4QB67	150.0	2.94273e-44	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0026746_2	1235790.C805_00062	150.0	9.80909e-45	N/A	N/A
structural_annotation	UHGV-0026746_2	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_3	phrog_16490	100.5	2.1e-31	N/A	unknown function
UniRef90	UHGV-0026746_3	UniRef90_A0A8F0WFQ8	88.6	4.6e-17	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0026746_3	1226322.HMPREF1545_00076	87.0	1.24e-17	N/A	N/A
PHROG	UHGV-0026746_4	phrog_22984	55.8	7.4e-16	N/A	unknown function
PHROG	UHGV-0026746_5	phrog_21718	101.7	5.5e-30	N/A	unknown function
eggNOG-mapper	UHGV-0026746_5	397290.C810_05210	92.0	2.87e-21	N/A	N/A
PHROG	UHGV-0026746_6	phrog_3754	105.3	4.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-0026746_6	476272.RUMHYD_01764	173.0	0	N/A	N/A
Pfam	UHGV-0026746_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0026746_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0026746_12	phrog_1863	70.6	4.1e-21	N/A	unknown function
UniRef90	UHGV-0026746_12	UniRef90_UPI001F223E8B	83.2	2.66e-19	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0026746_12	1226322.HMPREF1545_04027	73.9	1.95e-16	N/A	N/A
eggNOG-mapper	UHGV-0026746_13	621372.ACIH01000120_gene2143	65.1	0.000000000000336	N/A	N/A
KOfam	UHGV-0026746_14	K01447	65.2	1.2e-18	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0026746_14	phrog_15001	189.4	0	endolysin	lysis
UniRef90	UHGV-0026746_14	UniRef90_A0A1C6FMN0	228.0	0	N-acetylmuramoyl-L-alanine amidase XlyA	N/A
eggNOG-mapper	UHGV-0026746_14	411473.RUMCAL_03176	221.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0026746_14	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0026746_14	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0026746_14	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0026746_14	PF01510,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_15	phrog_20274	152.4	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0026746_15	UniRef90_A0A1C5ZRD7	182.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-0026746_15	1298920.KI911353_gene4880	181.0	0	N/A	N/A
Pfam	UHGV-0026746_15	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-0026746_15	COG4905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026746_15	PF06541,COG4905	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026746_16	UniRef90_A0A1Y4RWY1	112.0	1.07e-27	N/A	N/A
eggNOG-mapper	UHGV-0026746_16	693746.OBV_22700	138.0	1.28e-38	N/A	N/A
structural_annotation	UHGV-0026746_16	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_18	phrog_1220	157.7	0	head protein	head and packaging
eggNOG-mapper	UHGV-0026746_18	574376.BAMA_24785	75.1	0.00000000000000947	N/A	N/A
structural_annotation	UHGV-0026746_18	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_19	phrog_538	108.1	2.2e-32	minor tail protein	tail
UniRef90	UHGV-0026746_19	UniRef90_UPI000A26D4FC	84.0	0.0000000000000234	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0026746_19	394503.Ccel_0826	105.0	9.66e-23	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0026746_19	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0026746_19	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_20	phrog_33	46.1	0.0000000000009	distal tail protein Dit	tail
eggNOG-mapper	UHGV-0026746_20	411470.RUMGNA_02077	66.6	0.000000000811	COG NOG18823 non supervised orthologous group	N/A
COG	UHGV-0026746_20	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0026746_20	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_21	phrog_5493	112.6	2.9e-33	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0026746_21	536233.CLO_1577	166.0	4.64e-39	tape measure	N/A
COG	UHGV-0026746_21	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0026746_23	phrog_885	81.8	6.8e-24	major tail protein	tail
UniRef90	UHGV-0026746_23	UniRef90_A0A843J9F0	211.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0026746_23	1504822.CCNO01000012_gene492	257.0	0	N/A	N/A
structural_annotation	UHGV-0026746_23	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026746_24	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_25	phrog_17977	80.8	9.9e-24	N/A	unknown function
UniRef90	UHGV-0026746_25	UniRef90_UPI00141211AB	122.0	2.23e-33	head-tail adaptor protein	N/A
Pfam	UHGV-0026746_25	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0026746_25	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_27	phrog_544	179.6	0	major head protein	head and packaging
UniRef90	UHGV-0026746_27	UniRef90_A0A810PZM2	326.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0026746_27	1347392.CCEZ01000005_gene1236	273.0	0	N/A	N/A
structural_annotation	UHGV-0026746_27	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_28	phrog_194	43.6	0.0000000000047	head scaffolding protein	head and packaging
structural_annotation	UHGV-0026746_28	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_29	phrog_5	75.6	9.4e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-0026746_29	UniRef90_A0A6A8M6L6	109.0	3.52e-28	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0026746_29	1504822.CCNO01000013_gene284	93.2	3.69e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0026746_29	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0026746_29	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0026746_29	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_30	phrog_859	110.9	8.7e-33	portal protein	head and packaging
UniRef90	UHGV-0026746_30	UniRef90_A0A3A9EHQ6	234.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0026746_30	1111121.HMPREF1247_0797	202.0	0	cell adhesion	N/A
Pfam	UHGV-0026746_30	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0026746_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026746_30	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_31	phrog_64	125.1	3.4e-37	portal protein	head and packaging
UniRef90	UHGV-0026746_31	UniRef90_A0A285PU84	373.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0026746_31	1042156.CXIVA_01850	92.8	2.13e-17	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0026746_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0026746_31	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0026746_32	K06909	124.7	8.9e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0026746_32	phrog_2	160.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0026746_32	UniRef90_A0A1C6J947	459.0	0	Bacteriophage terminase large (ATPase) subunit and inactivated derivatives	N/A
eggNOG-mapper	UHGV-0026746_32	1226322.HMPREF1545_00043	457.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0026746_32	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0026746_32	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0026746_32	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0026746_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0026746_32	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_33	phrog_2412	57.3	2.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0026746_33	1232449.BAHV02000018_gene1532	57.4	0.0000000177	N/A	N/A
Pfam	UHGV-0026746_33	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
PHROG	UHGV-0026746_34	phrog_620	46.9	0.00000000000051	ParB-like partition protein	DNA, RNA and nucleotide metabolism
COG	UHGV-0026746_34	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-0026746_36	phrog_8680	246.8	0	N/A	unknown function
UniRef90	UHGV-0026746_36	UniRef90_A0A373V619	298.0	0	N/A	N/A
eggNOG-mapper	UHGV-0026746_36	411470.RUMGNA_02208	252.0	0	N/A	N/A
Pfam	UHGV-0026746_36	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0026746_36	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_41	phrog_30343	153.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0026746_41	411473.RUMCAL_00285	176.0	0	N/A	N/A
structural_annotation	UHGV-0026746_41	PF11039,MF_02210,TIGR03585,COG1670	N/A	N/A	N/A	N/A
KOfam	UHGV-0026746_43	K07317	58.6	7.5e-17	K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0026746_43	phrog_11371	54.0	0.0000000000000018	N/A	unknown function
UniRef90	UHGV-0026746_43	UniRef90_A0A1C6BWK1	110.0	2.12e-28	Modification methylase VspI	N/A
eggNOG-mapper	UHGV-0026746_43	1385520.N802_09455	95.9	1.29e-22	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
Pfam	UHGV-0026746_43	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0026746_43	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0026746_43	PF20473,MF_02217,NF001556,COG0742	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_45	phrog_3136	125.0	2.7e-37	N/A	unknown function
UniRef90	UHGV-0026746_45	UniRef90_A0A3D0HBD2	120.0	1.13e-31	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0026746_45	97139.C824_00742	88.2	5.77e-20	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0026746_45	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0026746_45	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0026746_46	K00390	75.1	5.4e-23	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0026746_46	phrog_424	85.0	5.1e-25	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0026746_46	UniRef90_A0A098AU96	623.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes	N/A
eggNOG-mapper	UHGV-0026746_46	1235800.C819_02256	534.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0026746_46	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0026746_46	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0026746_46	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_49	phrog_2562	157.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026746_49	UniRef90_A0A1C6GFP7	205.0	0	N/A	N/A
eggNOG-mapper	UHGV-0026746_49	290402.Cbei_1623	175.0	0	N/A	N/A
Pfam	UHGV-0026746_49	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0026746_49	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0026746_49	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-0026746_50	K03111	121.6	9.4e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0026746_50	phrog_44	134.0	8.8e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026746_50	UniRef90_A0A1C6GFU4	182.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0026746_50	1514668.JOOA01000002_gene3349	159.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0026746_50	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0026746_50	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0026746_50	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0026746_50	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0026746_50	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026746_52	UniRef90_A0A098GES5	90.5	2.56e-21	Putative phage associated protein	N/A
structural_annotation	UHGV-0026746_52	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_53	phrog_3490	120.3	1.3e-35	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026746_53	UniRef90_A0A1C6GFR4	174.0	0	Hef nuclease	N/A
eggNOG-mapper	UHGV-0026746_53	861454.HMPREF9099_00350	108.0	1.57e-27	ERCC4 domain	N/A
Pfam	UHGV-0026746_53	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0026746_53	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_54	phrog_3657	356.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0026746_54	1121864.OMO_02139	223.0	0	N/A	N/A
KOfam	UHGV-0026746_55	K10906	101.6	4.7e-35	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-0026746_55	phrog_412	236.1	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026746_55	UniRef90_A0A1C6GFL6	317.0	0	Exodeoxyribonuclease 8	N/A
eggNOG-mapper	UHGV-0026746_55	641147.HMPREF9021_02702	137.0	2.96e-36	N/A	N/A
Pfam	UHGV-0026746_55	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0026746_55	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0026746_55	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
Pfam	UHGV-0026746_60	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0026746_60	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
KOfam	UHGV-0026746_61	K22300	42.5	0.000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0026746_61	phrog_8	56.5	6.7e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0026746_61	UniRef90_A0A374HKJ0	70.9	0.0000000000000728	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0026746_61	97138.C820_00203	76.6	1.89e-16	Transcriptional	N/A
Pfam	UHGV-0026746_61	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0026746_61	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0026746_61	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0026746_62	phrog_7854	59.3	7e-17	endolysin	lysis
eggNOG-mapper	UHGV-0026746_62	169963.lmo0617	63.2	0.00000000257	N/A	N/A
Pfam	UHGV-0026746_62	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
Pfam	UHGV-0026746_62	PF16729	N/A	N/A	N/A	DUF5067
KOfam	UHGV-0026746_63	K14059	203.5	0	int; integrase	N/A
PHROG	UHGV-0026746_63	phrog_1	190.1	0	integrase	integration and excision
UniRef90	UHGV-0026746_63	UniRef90_A0A1C6CXA9	427.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0026746_63	641112.ACOK01000073_gene2860	349.0	0	Phage integrase family	N/A
Pfam	UHGV-0026746_63	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0026746_63	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0026746_63	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0026746	Yes	37,297	46	100	1