vOTU vOTU-044021

vOTU: vOTU-044021

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044021
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-03614 → vGENUS-05480 → vSUBGEN-03503 → vOTU-044021
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0029881
Biosample ID	N/A
Genome length (bp)	41,707 bps
CheckV completeness	100.00% (Complete)
CDS count	65
CDS density	88.23%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	11	Host agreement	81.82
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0029881_1	phrog_1535	116.9	2.3e-35	tail length tape measure protein	tail
UniRef90	UHGV-0029881_1	UniRef90_W1I523	115.0	7.53e-25	Uncultured bacterium extrachromosomal DNA RGI02278	N/A
eggNOG-mapper	UHGV-0029881_1	1499683.CCFF01000017_gene2923	131.0	1.57e-29	phage tail tape measure protein	N/A
COG	UHGV-0029881_1	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0029881_1	PF05537,TIGR01760	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029881_2	1121333.JMLH01000047_gene1011	76.6	5.5e-16	N/A	N/A
UniRef90	UHGV-0029881_3	UniRef90_A0A496N7D3	112.0	5.48e-30	N/A	N/A
eggNOG-mapper	UHGV-0029881_3	1211844.CBLM010000023_gene988	74.7	6.39e-16	N/A	N/A
Pfam	UHGV-0029881_3	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0029881_3	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029881_4	1121333.JMLH01000047_gene1013	176.0	0	N/A	N/A
structural_annotation	UHGV-0029881_4	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029881_5	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029881_6	476272.RUMHYD_01963	95.5	2e-22	N/A	N/A
eggNOG-mapper	UHGV-0029881_7	1232453.BAIF02000058_gene1630	73.2	0.0000000000000108	N/A	N/A
UniRef90	UHGV-0029881_8	UniRef90_A0A1V5X694	107.0	3.51e-28	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0029881_8	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0029881_8	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_10	phrog_247	270.2	0	major head protein	head and packaging
UniRef90	UHGV-0029881_10	UniRef90_A0A3D0LY55	414.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-0029881_10	1304866.K413DRAFT_3038	315.0	0	N/A	N/A
Pfam	UHGV-0029881_10	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-0029881_10	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_12	phrog_64	190.6	0	portal protein	head and packaging
UniRef90	UHGV-0029881_12	UniRef90_UPI00189F3DE6	355.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0029881_12	1121866.AUGK01000003_gene1429	304.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0029881_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0029881_12	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_13	phrog_38	187.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0029881_13	UniRef90_A0A318EQM2	429.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0029881_13	1123263.AUKY01000015_gene1608	509.0	0	chromosome segregation	N/A
COG	UHGV-0029881_13	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029881_13	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_19	phrog_606	76.7	2.3e-22	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0029881_19	935837.JAEK01000054_gene1463	73.2	0.000000000000163	DNA-packaging protein gp3	N/A
Pfam	UHGV-0029881_19	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-0029881_20	phrog_30550	100.4	1.5e-29	N/A	unknown function
UniRef90	UHGV-0029881_20	UniRef90_UPI001AB026D3	80.5	0.00000000000000276	cell wall hydrolase	N/A
eggNOG-mapper	UHGV-0029881_20	1519439.JPJG01000077_gene920	79.3	1.3e-16	Cell Wall Hydrolase	N/A
PHROG	UHGV-0029881_22	phrog_8841	446.0	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029881_22	UniRef90_A0A372V3W4	525.0	0	N/A	N/A
eggNOG-mapper	UHGV-0029881_22	742738.HMPREF9460_02495	439.0	0	N/A	N/A
Pfam	UHGV-0029881_22	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0029881_22	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0029881_22	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029881_22	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0029881_23	K02316	55.8	7.2e-16	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0029881_23	phrog_11992	86.7	3.5e-25	N/A	unknown function
UniRef90	UHGV-0029881_23	UniRef90_A0A0M2NGW9	71.6	0.00000000000372	DNA primase	N/A
eggNOG-mapper	UHGV-0029881_23	1408823.AXUS01000004_gene138	62.4	0.00000000874	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	N/A
Pfam	UHGV-0029881_23	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0029881_23	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0029881_23	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_24	phrog_3490	114.5	7.7e-34	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029881_24	UniRef90_A0A3D3U9X5	166.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0029881_24	1504823.CCMM01000008_gene1063	100.0	5.11e-25	N/A	N/A
Pfam	UHGV-0029881_24	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0029881_24	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0029881_25	K03111	94.0	2.6e-27	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0029881_25	phrog_44	101.4	1.1e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029881_25	UniRef90_A0A3C0WZ24	114.0	9.3e-30	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0029881_25	1121334.KB911069_gene1617	107.0	1.25e-27	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0029881_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0029881_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0029881_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0029881_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0029881_25	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_27	phrog_561	168.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029881_27	UniRef90_UPI001EE8E2AA	229.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0029881_27	861454.HMPREF9099_00346	207.0	0	N/A	N/A
Pfam	UHGV-0029881_27	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-0029881_27	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0029881_28	K10906	82.5	3e-32	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-0029881_28	phrog_412	239.3	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029881_28	UniRef90_A0A1C6FHM2	298.0	0	Exodeoxyribonuclease 8	N/A
eggNOG-mapper	UHGV-0029881_28	395494.Galf_0946	169.0	0	N/A	N/A
Pfam	UHGV-0029881_28	PF12684	N/A	N/A	N/A	DUF3799
structural_annotation	UHGV-0029881_28	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_33	phrog_9958	107.2	8.9e-32	N/A	unknown function
UniRef90	UHGV-0029881_33	UniRef90_A0A6N8GXR0	317.0	0	N/A	N/A
eggNOG-mapper	UHGV-0029881_33	1297617.JPJD01000020_gene312	178.0	0	N/A	N/A
Pfam	UHGV-0029881_33	PF11753	N/A	N/A	N/A	DUF3310
Pfam	UHGV-0029881_33	PF19789	N/A	N/A	N/A	DUF6273
KOfam	UHGV-0029881_35	K00558	43.0	0.0000000000031	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0029881_35	phrog_757	117.2	1e-34	DNA methyltransferase	other
UniRef90	UHGV-0029881_35	UniRef90_A0A3Q9QQY2	325.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0029881_35	622312.ROSEINA2194_01264	317.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-0029881_35	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0029881_35	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0029881_35	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_39	phrog_38832	78.2	2.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0029881_39	665956.HMPREF1032_00143	82.0	2.77e-17	N/A	N/A
structural_annotation	UHGV-0029881_39	PF10781	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029881_40	UniRef90_A0A8D9PDQ6	142.0	3.06884e-43	Restriction alleviation protein	N/A
Pfam	UHGV-0029881_40	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0029881_40	TIGR03655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029881_44	UniRef90_A0A417PE05	72.0	0.00000000000000362	4Fe-4S ferredoxin-type domain-containing protein	N/A
UniRef90	UHGV-0029881_45	UniRef90_A0A3A6ECV8	80.5	1.76e-17	N/A	N/A
eggNOG-mapper	UHGV-0029881_45	411470.RUMGNA_00214	60.1	0.00000000211	N/A	N/A
Pfam	UHGV-0029881_45	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0029881_45	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_47	phrog_30930	131.4	3.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-0029881_47	1214184.ALKY01000039_gene933	115.0	7.78e-32	N/A	N/A
PHROG	UHGV-0029881_48	phrog_111	173.8	0	DNA methyltransferase	other
UniRef90	UHGV-0029881_48	UniRef90_A0A2V2F8D8	236.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0029881_48	445972.ANACOL_03344	203.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0029881_48	oMTase_00015	182.5	0	orphan methyltransferase	RM
Pfam	UHGV-0029881_48	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
NCBIFam	UHGV-0029881_48	TIGR01712.1	N/A	N/A	phage N-6-adenine-methyltransferase	N/A
structural_annotation	UHGV-0029881_48	PF05869,TIGR01712,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_49	phrog_6721	144.3	2.8026e-45	N/A	unknown function
eggNOG-mapper	UHGV-0029881_49	679192.HMPREF9013_1123	252.0	0	N/A	N/A
structural_annotation	UHGV-0029881_49	MF_01408,TIGR02170	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029881_52	1408437.JNJN01000043_gene801	73.9	0.0000000000000529	N/A	N/A
structural_annotation	UHGV-0029881_53	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_54	phrog_16490	60.1	4.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0029881_54	397290.C810_05212	68.2	0.0000000000494	N/A	N/A
PHROG	UHGV-0029881_55	phrog_59	143.3	5.89947e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029881_55	UniRef90_UPI0013E35C2F	133.0	9.98e-36	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0029881_55	357276.EL88_11520	116.0	3.76e-30	HNH endonuclease domain protein	N/A
PADLOC	UHGV-0029881_55	HEase_00016	100.5	3.4e-29	homing endonuclease	RM
Pfam	UHGV-0029881_55	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0029881_55	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-0029881_55	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
structural_annotation	UHGV-0029881_55	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_56	phrog_22984	49.4	0.000000000000073	N/A	unknown function
PHROG	UHGV-0029881_59	phrog_9589	93.6	2.2e-27	endolysin	lysis
UniRef90	UHGV-0029881_59	UniRef90_UPI001A8D0C52	172.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0029881_59	552398.HMPREF0866_03091	166.0	0	CHAP domain	N/A
Pfam	UHGV-0029881_59	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0029881_59	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0029881_59	TIGR02594,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_60	phrog_1129	65.6	5.6e-19	holin	lysis
UniRef90	UHGV-0029881_60	UniRef90_A0A810PUU2	116.0	2.87e-32	Holin	N/A
eggNOG-mapper	UHGV-0029881_60	1256908.HMPREF0373_00463	87.0	2.47e-21	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0029881_60	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0029881_60	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_61	phrog_4105	53.4	0.0000000000000046	N/A	unknown function
PHROG	UHGV-0029881_62	phrog_372	164.7	0	tail protein	tail
UniRef90	UHGV-0029881_62	UniRef90_UPI001373A0FD	166.0	2.14001e-40	N/A	N/A
eggNOG-mapper	UHGV-0029881_62	1042156.CXIVA_07170	118.0	3.68e-25	tail collar domain protein	N/A
Pfam	UHGV-0029881_62	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0029881_62	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0029881_63	phrog_6616	119.8	1.9e-36	tail protein	tail
eggNOG-mapper	UHGV-0029881_63	469596.HMPREF9488_01318	271.0	0	N/A	N/A
structural_annotation	UHGV-0029881_63	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0029881_64	phrog_1194	115.9	1.7e-34	N/A	unknown function
UniRef90	UHGV-0029881_64	UniRef90_A0A4U9RD70	104.0	1.11e-26	Lj965 prophage protein	N/A
eggNOG-mapper	UHGV-0029881_64	469596.HMPREF9488_01317	103.0	4.44e-27	N/A	N/A
Pfam	UHGV-0029881_64	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0029881_64	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029881_65	1121333.JMLH01000047_gene1009	84.3	0.0000000000000473	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0029881	Yes	41,707	46	100	1