vOTU vOTU-044161

vOTU: vOTU-044161

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044161
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00044 → vSUBFAM-01046 → vGENUS-00965 → vSUBGEN-02406 → vOTU-044161
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0031718
Biosample ID	N/A
Genome length (bp)	133,817 bps
CheckV completeness	100.00% (Complete)
CDS count	173
CDS density	86.01%
tRNA count	14
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0031718_6	phrog_20187	177.2	0	N/A	unknown function
UniRef90	UHGV-0031718_6	UniRef90_A0A345BPQ2	104.0	1.17e-22	Putative Pol III-like exoribonuclease	N/A
structural_annotation	UHGV-0031718_6	PF21762,MF_00045,NF006316,COG0847	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_9	PF11019,MF_01022,NF003937,COG4502	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_12	PF08962	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_18	PF11429	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_20	K04769	93.7	3e-27	spoVT; AbrB family transcriptional regulator, stage V sporulation protein T	N/A
PHROG	UHGV-0031718_20	phrog_4681	76.0	3.1e-22	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0031718_20	UniRef90_A0A8A5ZJD8	84.0	2.27e-19	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0031718_20	1235835.C814_03375	79.3	2.74e-17	stage V sporulation protein T	N/A
Pfam	UHGV-0031718_20	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-0031718_20	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0031718_20	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0031718_20	PF04014,TIGR01439,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_31	phrog_5767	87.0	1.1e-26	sigma factor	transcription regulation
UniRef90	UHGV-0031718_31	UniRef90_A0A345BPU6	276.0	0	HTH DNA binding domain protein	N/A
PHROG	UHGV-0031718_32	phrog_3314	205.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0031718_32	1308863.U5J9N3_9CAUD	87.4	1.64e-16	N/A	N/A
PHROG	UHGV-0031718_33	phrog_15503	200.8	0	N/A	unknown function
UniRef90	UHGV-0031718_33	UniRef90_A0A0H3V0N0	467.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0031718_33	1308863.U5J9B2_9CAUD	244.0	0	N/A	N/A
structural_annotation	UHGV-0031718_33	PF20441,PF04466,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_35	phrog_2739	264.0	0	portal protein	head and packaging
UniRef90	UHGV-0031718_35	UniRef90_A0A345BPV2	435.0	0	Putative portal protein	N/A
eggNOG-mapper	UHGV-0031718_35	665956.HMPREF1032_03237	117.0	4.64e-25	N/A	N/A
structural_annotation	UHGV-0031718_35	PF05133,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_36	phrog_3313	115.2	2.3e-37	N/A	unknown function
UniRef90	UHGV-0031718_36	UniRef90_A0A843FJ52	154.0	3.95e-39	HALZ domain-containing protein	N/A
eggNOG-mapper	UHGV-0031718_36	574375.BAGA_05920	99.0	3.07e-19	N/A	N/A
structural_annotation	UHGV-0031718_36	PF04586,TIGR01543,COG3566	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_37	phrog_35301	47.6	0.000000000000021	N/A	unknown function
PHROG	UHGV-0031718_38	phrog_4088	231.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0031718_38	1541960.KQ78_01850	218.0	0	N/A	N/A
structural_annotation	UHGV-0031718_38	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_40	phrog_3853	75.9	4.1e-22	N/A	unknown function
PHROG	UHGV-0031718_41	phrog_29637	56.6	4.3e-16	N/A	unknown function
PHROG	UHGV-0031718_42	phrog_31155	43.2	0.0000000000049	N/A	unknown function
structural_annotation	UHGV-0031718_42	PF19408,PF11649,NF041894,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_43	phrog_6123	65.7	6.3e-19	virion structural protein	head and packaging
structural_annotation	UHGV-0031718_43	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_44	phrog_4051	107.5	1.3e-31	N/A	unknown function
PHROG	UHGV-0031718_45	phrog_2729	176.0	0	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0031718_45	1163671.JAGI01000002_gene1222	110.0	8.95e-26	N/A	N/A
KOfam	UHGV-0031718_48	K20283	75.5	5.9e-30	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-0031718_48	phrog_4211	176.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0031718_48	881953.E0YJ17_9CAUD	92.8	0.00000000000000198	peptidoglycan catabolic process	N/A
Pfam	UHGV-0031718_48	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0031718_48	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-0031718_49	PF02010,MF_00075,MF_04116,NF040788	N/A	N/A	N/A	N/A
Pfam	UHGV-0031718_50	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
COG	UHGV-0031718_50	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
structural_annotation	UHGV-0031718_50	NF033189	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_51	PF19077,PF19266,PF13157,PF00041,MF_04116,MF_01591,NF041335,COG3499,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_52	phrog_32343	93.7	0	N/A	unknown function
UniRef90	UHGV-0031718_52	UniRef90_A0A345BPW9	312.0	0	Putative flagellin-like protein	N/A
eggNOG-mapper	UHGV-0031718_52	1235800.C819_00529	60.1	0.00000284	N/A	N/A
structural_annotation	UHGV-0031718_52	PF05113,NF033848,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0031718_54	1519439.JPJG01000060_gene1892	58.9	0.00000421	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0031718_54	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0031718_58	phrog_5302	135.6	2.90069e-43	tail protein	tail
UniRef90	UHGV-0031718_58	UniRef90_R6M197	173.0	1.4013e-45	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-0031718_58	1203606.HMPREF1526_00261	376.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0031718_58	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0031718_58	COG1262	N/A	N/A	N/A	N/A
Pfam	UHGV-0031718_61	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0031718_61	PF09682,TIGR01673	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0031718_63	476272.RUMHYD_01953	74.7	9.95e-17	N/A	N/A
PHROG	UHGV-0031718_64	phrog_16490	85.4	6.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-0031718_64	1408437.JNJN01000043_gene803	88.2	5.87e-18	N/A	N/A
PHROG	UHGV-0031718_65	phrog_20016	183.6	0	N/A	unknown function
UniRef90	UHGV-0031718_65	UniRef90_A0A345BPX4	159.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0031718_65	1226322.HMPREF1545_00077	165.0	0	N/A	N/A
structural_annotation	UHGV-0031718_65	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0031718_66	658655.HMPREF0988_00915	76.3	0.0000000000000156	N/A	N/A
PHROG	UHGV-0031718_67	phrog_1233	55.6	9.3e-16	N/A	unknown function
UniRef90	UHGV-0031718_67	UniRef90_A0A345BPX6	140.0	2.98995e-41	Metal-dependent hydrolase	N/A
eggNOG-mapper	UHGV-0031718_67	658655.HMPREF0988_00914	84.3	8.8e-20	N/A	N/A
eggNOG-mapper	UHGV-0031718_69	871968.DESME_08990	51.6	0.00000043	N/A	N/A
KOfam	UHGV-0031718_70	K01520	135.3	4.79999e-40	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0031718_70	phrog_135	149.8	9.80909e-45	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_70	UniRef90_A0A8D9UHK3	150.0	3.78351e-44	dUTPase	N/A
eggNOG-mapper	UHGV-0031718_70	622312.ROSEINA2194_00085	135.0	3.61e-39	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-0031718_70	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0031718_70	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0031718_70	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0031718_70	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_72	PF14639,MF_00651,NF001026,COG0816	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_75	K00525	455.4	0	E1.17.4.1A, nrdA, nrdE; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]	N/A
PHROG	UHGV-0031718_75	phrog_84	270.3	0	ribonucleoside-diphosphate reductase large subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_75	UniRef90_UPI00085BFD37	686.0	0	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	N/A
eggNOG-mapper	UHGV-0031718_75	537013.CLOSTMETH_03946	672.0	0	Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen	N/A
Pfam	UHGV-0031718_75	PF02867	N/A	N/A	Ribonucleotide reductase, barrel domain	Ribonuc_red_lgC
COG	UHGV-0031718_75	COG0209	N/A	N/A	Ribonucleotide reductase alpha subunit	N/A
structural_annotation	UHGV-0031718_75	PF02867,MF_04026,NF006417,COG0209	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_76	K00942	93.0	4.4e-27	gmk, GUK1; guanylate kinase [EC:2.7.4.8]	N/A
PHROG	UHGV-0031718_76	phrog_1815	105.4	7.5e-31	guanylate kinase	other
UniRef90	UHGV-0031718_76	UniRef90_A0A401UTJ7	107.0	6.28e-26	Guanylate kinase	N/A
eggNOG-mapper	UHGV-0031718_76	742733.HMPREF9469_00862	85.5	2.84e-18	Guanylate kinase homologues.	N/A
Pfam	UHGV-0031718_76	PF00625	N/A	N/A	Guanylate kinase	Guanylate_kin
COG	UHGV-0031718_76	COG0194	N/A	N/A	Guanylate kinase	N/A
structural_annotation	UHGV-0031718_76	PF00625,MF_00328,TIGR03263,COG0194	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_77	K02337	554.7	0	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	N/A
PHROG	UHGV-0031718_77	phrog_405	690.6	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_77	UniRef90_A0A843FMN7	1434.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0031718_77	224308.BSU20340	911.0	0	DNA polymerase	N/A
Pfam	UHGV-0031718_77	PF02811	N/A	N/A	PHP domain	PHP
Pfam	UHGV-0031718_77	PF07733	N/A	N/A	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
Pfam	UHGV-0031718_77	PF17657	N/A	N/A	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
Pfam	UHGV-0031718_77	PF14579	N/A	N/A	Helix-hairpin-helix motif	HHH_6
COG	UHGV-0031718_77	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
structural_annotation	UHGV-0031718_77	PF07733,PF02811,PF17657,PF14579,MF_01902,NF005617,COG0587	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_78	PF04466,TIGR00090	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_79	K03581	149.1	1.12104e-44	recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]	N/A
PHROG	UHGV-0031718_79	phrog_325	259.3	0	Dda-like helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_79	UniRef90_A0A843GQ82	360.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0031718_79	1541960.KQ78_01910	188.0	0	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD	N/A
PADLOC	UHGV-0031718_79	cluster10	55.5	3.1e-24	RecD_0_IVD	CRISPR-CAS
Pfam	UHGV-0031718_79	PF13604	N/A	N/A	AAA domain	AAA_30
Pfam	UHGV-0031718_79	PF13538	N/A	N/A	UvrD-like helicase C-terminal domain	UvrD_C_2
COG	UHGV-0031718_79	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0031718_79	PF13604,MF_01488,TIGR01448,COG0507	N/A	N/A	N/A	N/A
UniRef90	UHGV-0031718_81	UniRef90_A0A843FTG5	152.0	1.13996e-41	Phage_lysozyme2 domain-containing protein	N/A
Pfam	UHGV-0031718_81	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-0031718_81	COG3583	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_81	PF18013,PF02185,NF001260	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_82	K07462	288.9	0	recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0031718_82	phrog_2484	424.8	0	RecJ-like ssDNA exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_82	UniRef90_A0A843FU26	556.0	0	DHH family phosphoesterase	N/A
eggNOG-mapper	UHGV-0031718_82	665956.HMPREF1032_03163	322.0	0	exonuclease	N/A
Pfam	UHGV-0031718_82	PF01368	N/A	N/A	DHH family	DHH
Pfam	UHGV-0031718_82	PF17768	N/A	N/A	RecJ OB domain	RecJ_OB
COG	UHGV-0031718_82	COG0608	N/A	N/A	ssDNA-specific exonuclease RecJ, DHH superfamily, may be involved in archaeal DNA replication intiation	N/A
structural_annotation	UHGV-0031718_82	PF17768,PF02272,MF_00207,TIGR00644,COG0608	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_83	K02316	53.8	0.0000000000000019	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0031718_83	phrog_47	106.6	3.2e-31	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_83	UniRef90_A0A345BPU0	301.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0031718_83	1280.SAXN108_2224	205.0	0	DNA primase activity	N/A
COG	UHGV-0031718_83	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0031718_83	PF01807,PF19898,MF_00974,NF006382,COG0358	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_85	K02314	103.2	2.9e-30	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0031718_85	phrog_19	159.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_85	UniRef90_A0A843FVR3	635.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0031718_85	224308.BSU20370	366.0	0	DnaB-like helicase C terminal domain	N/A
Pfam	UHGV-0031718_85	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0031718_85	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0031718_85	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0031718_85	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_86	phrog_124	139.2	2.50006e-41	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_86	UniRef90_A0A843GMB3	234.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0031718_86	1541960.KQ78_01919	170.0	0	Belongs to the helicase family. UvrD subfamily	N/A
Pfam	UHGV-0031718_86	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0031718_86	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0031718_86	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_87	phrog_4645	138.8	2.70002e-41	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_87	UniRef90_A0A345BQ04	114.0	5.41e-26	LAGLIDADG-like domain protein	N/A
eggNOG-mapper	UHGV-0031718_87	1235659.S4T8V2_9CAUD	73.2	0.00000000000423	N-acetyltransferase activity	N/A
Pfam	UHGV-0031718_87	PF14528	N/A	N/A	LAGLIDADG-like domain	LAGLIDADG_3
structural_annotation	UHGV-0031718_87	PF03161,PF02796,MF_01420,TIGR00647,TIGR04381,COG1372	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_89	PF00436,PF19649,MF_00984,NF004476,COG2965	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_90	K03465	97.8	1.2e-28	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-0031718_90	phrog_85	54.0	0.0000000000000025	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_90	UniRef90_A0A7X2NTD7	304.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0031718_90	1282887.AUJG01000001_gene1906	286.0	0	thymidylate synthase (FAD) activity	N/A
Pfam	UHGV-0031718_90	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
COG	UHGV-0031718_90	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
structural_annotation	UHGV-0031718_90	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_91	phrog_314	88.9	9.2e-26	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_91	UniRef90_A0A345BPZ2	137.0	9.66e-35	GIY-YIG domain-containing protein	N/A
PADLOC	UHGV-0031718_91	HEase_00030	44.5	0.0000000000031	homing endonuclease	RM
Pfam	UHGV-0031718_91	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
NCBIFam	UHGV-0031718_91	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
COG	UHGV-0031718_91	COG3860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_91	PF19835,TIGR01453	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_92	PF04182,MF_01909,NF040939,COG1675	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_95	K10747	97.5	9.3e-29	LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]	N/A
PHROG	UHGV-0031718_95	phrog_114	137.4	9.99995e-41	ATP-dependent DNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_95	UniRef90_A0A345BPZ1	317.0	0	DNA ligase	N/A
eggNOG-mapper	UHGV-0031718_95	1121121.KB894295_gene4492	182.0	0	dna ligase	N/A
Pfam	UHGV-0031718_95	PF01068	N/A	N/A	ATP dependent DNA ligase domain	DNA_ligase_A_M
COG	UHGV-0031718_95	COG1793	N/A	N/A	ATP-dependent DNA ligase	N/A
structural_annotation	UHGV-0031718_95	PF01068,MF_00407,TIGR02779,COG1793	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_96	K02469	631.9	0	gyrA; DNA gyrase subunit A [EC:5.6.2.2]	N/A
PHROG	UHGV-0031718_96	phrog_551	360.0	0	DNA topoisomerase II	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_96	UniRef90_A0A832SNJ2	536.0	0	DNA topoisomerase (ATP-hydrolyzing)	N/A
eggNOG-mapper	UHGV-0031718_96	1541960.KQ78_01979	411.0	0	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	N/A
Pfam	UHGV-0031718_96	PF00521	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	DNA_topoisoIV
Pfam	UHGV-0031718_96	PF03989	N/A	N/A	DNA gyrase C-terminal domain, beta-propeller	DNA_gyraseA_C
COG	UHGV-0031718_96	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-0031718_96	PF00521,PF03989,MF_01897,NF004043,COG0188	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_97	K02470	634.7	0	gyrB; DNA gyrase subunit B [EC:5.6.2.2]	N/A
PHROG	UHGV-0031718_97	phrog_543	516.5	0	DNA topoisomerase II large subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_97	UniRef90_A0A345BPY9	630.0	0	DNA topoisomerase (ATP-hydrolyzing)	N/A
eggNOG-mapper	UHGV-0031718_97	689781.AUJX01000045_gene2658	414.0	0	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	N/A
Pfam	UHGV-0031718_97	PF02518	N/A	N/A	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	HATPase_c
Pfam	UHGV-0031718_97	PF00204	N/A	N/A	DNA gyrase B	DNA_gyraseB
Pfam	UHGV-0031718_97	PF01751	N/A	N/A	Toprim domain	Toprim
Pfam	UHGV-0031718_97	PF00986	N/A	N/A	DNA gyrase B subunit, carboxyl terminus	DNA_gyraseB_C
COG	UHGV-0031718_97	COG0187	N/A	N/A	DNA gyrase/topoisomerase IV, subunit B	N/A
structural_annotation	UHGV-0031718_97	PF00204,MF_01898,TIGR01059,COG0187	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_98	K03469	130.3	1.9e-38	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0031718_98	phrog_531	130.4	9.8e-39	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_98	UniRef90_A0A843FJ64	124.0	3.39e-33	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0031718_98	1121451.DESAM_20563	95.1	1.1e-22	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0031718_98	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0031718_98	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0031718_98	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_100	K21470	45.1	0.0000000000012	ycbB; L,D-transpeptidase YcbB	N/A
PHROG	UHGV-0031718_100	phrog_9589	70.8	1.2e-26	endolysin	lysis
eggNOG-mapper	UHGV-0031718_100	552398.HMPREF0866_03091	145.0	8.52e-37	CHAP domain	N/A
Pfam	UHGV-0031718_100	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0031718_100	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0031718_100	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0031718_100	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
KOfam	UHGV-0031718_101	K07175	157.7	0	phoH2; PhoH-like ATPase	N/A
PHROG	UHGV-0031718_101	phrog_2765	207.8	0	PhoH-like phosphate starvation-inducible	other
UniRef90	UHGV-0031718_101	UniRef90_A0A1C5UCD2	425.0	0	PhoH-like protein	N/A
eggNOG-mapper	UHGV-0031718_101	1123252.ATZF01000010_gene420	268.0	0	PIN domain	N/A
Pfam	UHGV-0031718_101	PF13638	N/A	N/A	PIN domain	PIN_4
Pfam	UHGV-0031718_101	PF02562	N/A	N/A	PhoH-like protein	PhoH
COG	UHGV-0031718_101	COG1875	N/A	N/A	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	N/A
structural_annotation	UHGV-0031718_101	PF02562,PF13638,PF09142,MF_00265,NF007827,NF009148,COG1875	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_104	phrog_547	90.4	1.6e-26	phosphoesterase	other
UniRef90	UHGV-0031718_104	UniRef90_A0A1I0M725	157.0	2.8026e-45	Calcineurin-like phosphoesterase superfamily protein	N/A
eggNOG-mapper	UHGV-0031718_104	445961.IW15_14075	68.2	0.0000000000177	Calcineurin-like phosphoesterase superfamily domain	N/A
COG	UHGV-0031718_104	COG4186	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_104	PF12850,MF_00575,NF006988,COG4186	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_106	phrog_6931	54.8	0.0000000000000013	N/A	unknown function
UniRef90	UHGV-0031718_106	UniRef90_A0A345BPY6	73.6	0.000000000000172	AAA domain protein	N/A
Pfam	UHGV-0031718_106	PF13671	N/A	N/A	AAA domain	AAA_33
COG	UHGV-0031718_106	COG4639	N/A	N/A	Predicted kinase	N/A
structural_annotation	UHGV-0031718_106	PF13671,MF_00065,TIGR03574,COG4088	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_107	phrog_1257	46.3	0.00000000000075	ribosome associated inhibitor A; zinc finger domain	moron, auxiliary metabolic gene and host takeover
structural_annotation	UHGV-0031718_109	PF01978,MF_01177,NF008240,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_112	K18961	129.8	1.1e-38	rnlA; T4 RNA ligase 1 [EC:6.5.1.3]	N/A
PHROG	UHGV-0031718_112	phrog_562	172.0	0	RNA ligase and tail fiber protein attachment catalyst	tail
UniRef90	UHGV-0031718_112	UniRef90_A0A2G4F066	189.0	0	2'-5' RNA ligase	N/A
eggNOG-mapper	UHGV-0031718_112	179408.Osc7112_2735	189.0	0	RNA ligase	N/A
Pfam	UHGV-0031718_112	PF09511	N/A	N/A	RNA ligase	RNA_lig_T4_1
structural_annotation	UHGV-0031718_112	PF09511,MF_04149,TIGR02308,COG5324	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_113	phrog_547	67.8	7.8e-22	phosphoesterase	other
UniRef90	UHGV-0031718_113	UniRef90_A0A843FNF2	230.0	0	Metallophosphoesterase	N/A
eggNOG-mapper	UHGV-0031718_113	1410632.JHWW01000019_gene1481	140.0	7.83e-39	N/A	N/A
Pfam	UHGV-0031718_113	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
structural_annotation	UHGV-0031718_113	MF_00575,TIGR04123,COG4186	N/A	N/A	N/A	N/A
KOfam	UHGV-0031718_115	K00600	561.1	0	glyA, SHMT; glycine hydroxymethyltransferase [EC:2.1.2.1]	N/A
PHROG	UHGV-0031718_115	phrog_9968	471.5	0	methyltransferase	other
UniRef90	UHGV-0031718_115	UniRef90_A0A354UC54	480.0	0	Serine hydroxymethyltransferase	N/A
eggNOG-mapper	UHGV-0031718_115	858215.Thexy_0455	422.0	0	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	N/A
Pfam	UHGV-0031718_115	PF00464	N/A	N/A	Serine hydroxymethyltransferase	SHMT
NCBIFam	UHGV-0031718_115	NF000586.1	N/A	N/A	serine hydroxymethyltransferase	N/A
COG	UHGV-0031718_115	COG0112	N/A	N/A	Glycine/serine hydroxymethyltransferase	N/A
HAMAP	UHGV-0031718_115	MF_00051	N/A	N/A	Serine hydroxymethyltransferase [glyA]	N/A
structural_annotation	UHGV-0031718_115	PF00464,MF_00051,NF000586,COG0112	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_119	phrog_22543	56.8	3e-16	N/A	unknown function
Pfam	UHGV-0031718_122	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-0031718_125	phrog_839	49.5	0.000000000000036	N/A	unknown function
KOfam	UHGV-0031718_129	K07313	117.9	7.8e-35	pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]	N/A
PHROG	UHGV-0031718_129	phrog_246	109.9	1.9e-32	NinI-like serine-threonine phosphatase	other
UniRef90	UHGV-0031718_129	UniRef90_R6LQ90	198.0	0	Metallophos domain-containing protein	N/A
eggNOG-mapper	UHGV-0031718_129	500633.CLOHIR_00780	185.0	0	phosphoprotein phosphatase activity	N/A
Pfam	UHGV-0031718_129	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0031718_129	COG0639	N/A	N/A	Diadenosine tetraphosphatase ApaH/serine/threonine protein phosphatase, PP2A family	N/A
structural_annotation	UHGV-0031718_129	PF12850,MF_01443,NF007425,COG0622	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_133	phrog_1479	59.6	6.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0031718_133	1256908.HMPREF0373_01589	98.6	1.16e-25	N/A	N/A
Pfam	UHGV-0031718_133	PF20274	N/A	N/A	Cyclic-phosphate processing Receiver domain	cREC_REC
structural_annotation	UHGV-0031718_133	PF20274	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_134	PF01978,MF_01819,NF012168,COG0735	N/A	N/A	N/A	N/A
Pfam	UHGV-0031718_139	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
PHROG	UHGV-0031718_140	phrog_33094	40.2	0.000000000076	N/A	unknown function
PHROG	UHGV-0031718_141	phrog_35541	129.8	1.90001e-40	N/A	unknown function
UniRef90	UHGV-0031718_141	UniRef90_A0A3D6B2G4	184.0	0	Mtd_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0031718_141	411470.RUMGNA_00120	57.4	0.00000294	N/A	N/A
structural_annotation	UHGV-0031718_141	PF18454	N/A	N/A	N/A	N/A
PHROG	UHGV-0031718_142	phrog_27786	49.5	0.000000000000043	tail spike protein	tail
UniRef90	UHGV-0031718_142	UniRef90_A0A6J5LI95	55.5	0.00000106	Mtd_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0031718_142	679935.Alfi_2724	62.8	0.00000000124	N/A	N/A
Pfam	UHGV-0031718_142	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
structural_annotation	UHGV-0031718_142	PF18454	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_143	PF20010	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_144	PF13973,NF038082,COG4728	N/A	N/A	N/A	N/A
Pfam	UHGV-0031718_145	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
COG	UHGV-0031718_145	COG3271	N/A	N/A	Predicted double-glycine leader peptidase, C39-like (CLD) domain	N/A
PHROG	UHGV-0031718_147	phrog_2255	93.3	1.6e-27	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031718_147	UniRef90_A0A8J7C728	105.0	3.77e-25	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0031718_147	1541960.KQ78_01975	117.0	2.76e-31	HNH nucleases	N/A
structural_annotation	UHGV-0031718_147	PF18337	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_163	PF11314	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_167	PF02581,MF_02232,TIGR01182,COG0135	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0031718_169	935948.KE386495_gene2241	65.1	0.0000000159	N/A	N/A
structural_annotation	UHGV-0031718_171	PF04492,TIGR01610	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031718_172	PF18903	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0031718	Yes	133,817	41	100	1