vOTU vOTU-044255

vOTU: vOTU-044255

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044255
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01252 → vGENUS-01208 → vSUBGEN-04634 → vOTU-044255
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0033091
Biosample ID	SAMEA4766378
Genome length (bp)	42,508 bps
CheckV completeness	100.00% (Complete)
CDS count	65
CDS density	95.88%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	9	Host agreement	88.89
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0033091_1	phrog_1357	243.7	0	major head protein	head and packaging
UniRef90	UHGV-0033091_1	UniRef90_A0A3E2WGW1	316.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0033091_1	1203606.HMPREF1526_02746	281.0	0	N/A	N/A
Pfam	UHGV-0033091_1	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0033091_1	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0033091_1	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_2	phrog_13908	229.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0033091_2	1410650.JHWL01000003_gene2831	114.0	7.02e-27	N/A	N/A
KOfam	UHGV-0033091_3	K07584	51.0	0.000000000000028	N/A	N/A
PHROG	UHGV-0033091_3	phrog_4478	58.8	8.2e-17	peptidase	other
UniRef90	UHGV-0033091_3	UniRef90_UPI00102FFAFD	51.2	0.00000265	ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-0033091_3	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0033091_3	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033091_3	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_4	phrog_156	312.9	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0033091_4	748224.HMPREF9436_01396	497.0	0	N/A	N/A
structural_annotation	UHGV-0033091_4	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0033091_5	K06909	92.1	7e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0033091_5	phrog_979	210.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0033091_5	UniRef90_A0A329UJ95	630.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0033091_5	748224.HMPREF9436_01395	638.0	0	Terminase-like family	N/A
Pfam	UHGV-0033091_5	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0033091_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0033091_5	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0033091_6	K07474	76.8	5.3e-22	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0033091_6	phrog_2606	138.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-0033091_6	UniRef90_UPI0018AAB08F	146.0	6.22e-39	terminase small subunit	N/A
eggNOG-mapper	UHGV-0033091_6	411490.ANACAC_00784	135.0	7.94e-36	terminase, small subunit	N/A
Pfam	UHGV-0033091_6	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0033091_6	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0033091_6	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
PHROG	UHGV-0033091_11	phrog_13890	55.3	6.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0033091_11	1519439.JPJG01000054_gene2127	67.4	0.000000000000343	N/A	N/A
eggNOG-mapper	UHGV-0033091_13	1304866.K413DRAFT_4686	95.5	2.38e-25	N/A	N/A
UniRef90	UHGV-0033091_14	UniRef90_R6NQM1	101.0	7.14e-23	Putative TnpX site-specific recombinase	N/A
eggNOG-mapper	UHGV-0033091_14	1235798.C817_05950	165.0	0	N/A	N/A
structural_annotation	UHGV-0033091_14	TIGR03826	N/A	N/A	N/A	N/A
KOfam	UHGV-0033091_20	K00390	49.2	0.000000000000083	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0033091_20	phrog_424	64.3	2.3e-18	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0033091_20	UniRef90_UPI001BC79B65	282.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0033091_20	1232452.BAIB02000007_gene1640	120.0	1.58e-31	Phosphoadenosine phosphosulfate reductase	N/A
Pfam	UHGV-0033091_20	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0033091_20	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-0033091_21	phrog_424	63.5	3.5e-18	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0033091_21	UniRef90_UPI001BBBFCB7	322.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0033091_21	397291.C804_05723	142.0	2.26e-39	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0033091_21	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0033091_21	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0033091_21	PF01507,MF_00064,NF002537,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033091_23	1232453.BAIF02000057_gene1147	68.9	0.000000000000119	N/A	N/A
PHROG	UHGV-0033091_24	phrog_757	188.5	0	DNA methyltransferase	other
UniRef90	UHGV-0033091_24	UniRef90_A0A374BFJ7	267.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0033091_24	397290.C810_01487	234.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0033091_24	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0033091_24	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_25	phrog_355	76.5	3.2e-22	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033091_25	UniRef90_UPI001BBBA8BA	149.0	4.2039e-45	N/A	N/A
eggNOG-mapper	UHGV-0033091_25	1125725.HMPREF1325_1838	72.8	0.00000000000000162	N/A	N/A
Pfam	UHGV-0033091_25	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0033091_25	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0033091_25	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033091_28	UniRef90_UPI001897C27C	94.7	2.2e-23	N/A	N/A
eggNOG-mapper	UHGV-0033091_28	665950.HMPREF1025_02540	73.2	0.00000000000000623	N/A	N/A
Pfam	UHGV-0033091_28	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0033091_28	PF04448,NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-0033091_29	K03111	123.2	3.4e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0033091_29	phrog_44	124.2	1.1e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033091_29	UniRef90_UPI001BC26013	204.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0033091_29	742723.HMPREF9477_01387	192.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0033091_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0033091_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0033091_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0033091_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0033091_29	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_30	phrog_24368	57.8	1.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0033091_30	742740.HMPREF9474_04313	68.9	0.000000000000585	N/A	N/A
PHROG	UHGV-0033091_31	phrog_3584	170.6	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0033091_31	742740.HMPREF9474_04323	166.0	0	N/A	N/A
structural_annotation	UHGV-0033091_31	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_37	phrog_7566	94.1	8.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0033091_37	742740.HMPREF9474_04319	85.9	3.71e-20	N/A	N/A
PHROG	UHGV-0033091_38	phrog_9958	137.9	4.49999e-41	N/A	unknown function
UniRef90	UHGV-0033091_38	UniRef90_UPI001D08A241	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033091_38	1160721.RBI_I01591	113.0	1.93e-28	N/A	N/A
structural_annotation	UHGV-0033091_39	PF13601,MF_01819,NF008565,COG1846	N/A	N/A	N/A	N/A
KOfam	UHGV-0033091_40	K22300	57.9	2.4e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0033091_40	phrog_8	53.4	0.0000000000000063	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033091_40	UniRef90_UPI0016514086	125.0	9.1e-35	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0033091_40	1095750.HMPREF9970_1686	117.0	1.76e-32	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0033091_40	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0033091_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0033091_40	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033091_41	411459.RUMOBE_03713	77.0	0.000000000000151	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0033091_41	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0033091_41	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
structural_annotation	UHGV-0033091_41	PF21461	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_43	phrog_26861	63.0	1.4e-24	N/A	unknown function
UniRef90	UHGV-0033091_43	UniRef90_UPI001D06FBDF	127.0	1.45e-33	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0033091_43	478749.BRYFOR_05879	115.0	3.3e-29	PFAM single-strand binding protein Primosomal replication protein n	N/A
Pfam	UHGV-0033091_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0033091_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0033091_43	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
Pfam	UHGV-0033091_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0033091_44	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0033091_45	K06400	235.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0033091_45	phrog_95	247.1	0	integrase	integration and excision
UniRef90	UHGV-0033091_45	UniRef90_A0A0V8QI90	451.0	0	Recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0033091_45	483218.BACPEC_01184	444.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0033091_45	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0033091_45	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0033091_45	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0033091_45	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-0033091_46	PF02915	N/A	N/A	Rubrerythrin	Rubrerythrin
KOfam	UHGV-0033091_50	K01185	155.7	0	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0033091_50	phrog_7	177.7	0	endolysin	lysis
UniRef90	UHGV-0033091_50	UniRef90_A0A843HJI5	169.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-0033091_50	756067.MicvaDRAFT_4109	147.0	1.3e-40	Phage lysozyme	N/A
Pfam	UHGV-0033091_50	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
Pfam	UHGV-0033091_50	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0033091_50	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
HAMAP	UHGV-0033091_50	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-0033091_50	PF01471,PF00959,MF_04110,COG3772,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_51	phrog_443	61.5	2e-17	holin	lysis
UniRef90	UHGV-0033091_51	UniRef90_UPI001EE0823A	96.3	1.54e-24	holin	N/A
eggNOG-mapper	UHGV-0033091_51	626523.GCWU000342_01012	86.7	2.37e-21	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0033091_51	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0033091_51	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_52	phrog_1048	99.9	3.7e-29	N/A	unknown function
UniRef90	UHGV-0033091_52	UniRef90_A0A373MX10	152.0	2.52234e-44	N/A	N/A
eggNOG-mapper	UHGV-0033091_52	457412.RSAG_01107	147.0	4.59626e-43	N/A	N/A
Pfam	UHGV-0033091_52	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0033091_52	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0033091_52	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_53	phrog_937	58.4	1.4e-16	hemolysin	other
UniRef90	UHGV-0033091_53	UniRef90_R5GGW2	84.0	5.16e-19	Phosphoglucosamine mutase	N/A
eggNOG-mapper	UHGV-0033091_53	1235792.C808_00576	83.2	1.65e-19	N/A	N/A
PHROG	UHGV-0033091_54	phrog_22978	225.7	0	N/A	unknown function
UniRef90	UHGV-0033091_54	UniRef90_A0A396KH15	376.0	0	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033091_54	748224.HMPREF9436_01406	364.0	0	N/A	N/A
KOfam	UHGV-0033091_55	K12943	55.4	7.9e-16	ygeR; lipoprotein YgeR	N/A
PHROG	UHGV-0033091_55	phrog_4602	51.5	0.000000000000024	transglycosylase	other
eggNOG-mapper	UHGV-0033091_55	1410650.JHWL01000003_gene2815	111.0	3.77e-24	N/A	N/A
Pfam	UHGV-0033091_55	PF01476	N/A	N/A	LysM domain	LysM
PHROG	UHGV-0033091_56	phrog_18190	45.0	0.00000000000073	N/A	unknown function
COG	UHGV-0033091_56	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-0033091_57	phrog_511	228.5	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0033091_57	1321782.HMPREF1986_00351	360.0	0	N/A	N/A
structural_annotation	UHGV-0033091_57	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_58	phrog_12105	120.3	9.3e-36	N/A	unknown function
eggNOG-mapper	UHGV-0033091_58	1226322.HMPREF1545_03850	52.8	0.000000512	N/A	N/A
eggNOG-mapper	UHGV-0033091_59	476272.RUMHYD_00002	125.0	4.64e-27	N/A	N/A
eggNOG-mapper	UHGV-0033091_60	411470.RUMGNA_03237	84.3	3.19e-20	N/A	N/A
structural_annotation	UHGV-0033091_60	PF08948,MF_01537,NF007541,COG3123	N/A	N/A	N/A	N/A
PHROG	UHGV-0033091_61	phrog_20274	152.9	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0033091_61	UniRef90_A0A1C5TNG1	205.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-0033091_61	411902.CLOBOL_05645	203.0	0	N/A	N/A
Pfam	UHGV-0033091_61	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-0033091_61	COG4905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033091_61	PF06541,COG4905	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033091_62	UniRef90_UPI001BC63046	341.0	0	Acyl carrier protein	N/A
eggNOG-mapper	UHGV-0033091_62	411902.CLOBOL_05646	162.0	0	N/A	N/A
structural_annotation	UHGV-0033091_62	PF14301	N/A	N/A	N/A	N/A
KOfam	UHGV-0033091_64	K16628	57.4	5.2e-17	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0033091_64	phrog_25888	99.9	1.3e-40	N/A	unknown function
Pfam	UHGV-0033091_64	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0033091	Yes	42,508	47	100	1