vOTU vOTU-044328

vOTU: vOTU-044328

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044328
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00131 → vSUBGEN-40673 → vOTU-044328
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0033986
Biosample ID	SAMEA4765718
Genome length (bp)	42,654 bps
CheckV completeness	100.00% (Complete)
CDS count	72
CDS density	90.80%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	475	Host agreement	98.95
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0033986_1	UniRef90_UPI000BEF0F65	70.9	0.00000000000000636	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0033986_1	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033986_2	UniRef90_A0A2A7AM72	157.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0033986_2	1378168.N510_01712	78.6	3.55e-16	N/A	N/A
structural_annotation	UHGV-0033986_2	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033986_3	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033986_6	394503.Ccel_2974	59.3	0.000000761	N/A	N/A
structural_annotation	UHGV-0033986_6	COG5342	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_9	phrog_1373	43.2	0.0000000000026	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033986_9	UniRef90_A0A2A7AM70	189.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0033986_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033986_9	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0033986_9	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0033986_10	K14059	182.9	0	int; integrase	N/A
PHROG	UHGV-0033986_10	phrog_1	169.4	0	integrase	integration and excision
UniRef90	UHGV-0033986_10	UniRef90_A0A367GI93	224.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0033986_10	1507.HMPREF0262_00307	159.0	1.36066e-42	Phage integrase family	N/A
Pfam	UHGV-0033986_10	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0033986_10	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0033986_10	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033986_11	1408437.JNJN01000043_gene801	93.2	9.46e-21	N/A	N/A
eggNOG-mapper	UHGV-0033986_12	1408437.JNJN01000043_gene802	117.0	1.49e-32	N/A	N/A
PHROG	UHGV-0033986_13	phrog_16490	106.0	1.2e-39	N/A	unknown function
eggNOG-mapper	UHGV-0033986_13	1408437.JNJN01000043_gene803	120.0	4.41e-30	N/A	N/A
PHROG	UHGV-0033986_17	phrog_25567	40.4	0.000000000041	N/A	unknown function
COG	UHGV-0033986_17	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0033986_17	PF13560,NF040522	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033986_18	UniRef90_A0A1Y3R5J8	50.1	0.000000922	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033986_18	1160721.RBI_I00206	58.9	0.000000000051	N/A	N/A
Pfam	UHGV-0033986_18	PF09274	N/A	N/A	ParG	ParG
structural_annotation	UHGV-0033986_18	PF10723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033986_20	1235802.C823_05251	150.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0033986_20	PF19363,COG3355	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033986_21	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_23	phrog_918	99.7	1.6e-29	N/A	unknown function
UniRef90	UHGV-0033986_23	UniRef90_UPI000EC62F11	180.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033986_23	411902.CLOBOL_05677	137.0	3.89995e-41	N/A	N/A
Pfam	UHGV-0033986_23	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0033986_23	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_24	phrog_15303	82.8	3.3e-24	N/A	unknown function
PHROG	UHGV-0033986_25	phrog_1863	75.4	4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0033986_25	718252.FP2_04900	146.0	5.60519e-45	N/A	N/A
KOfam	UHGV-0033986_26	K07273	161.1	0	acm; lysozyme	N/A
PHROG	UHGV-0033986_26	phrog_291	121.2	9.7e-36	endolysin	lysis
UniRef90	UHGV-0033986_26	UniRef90_A0A564U0D3	346.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0033986_26	718252.FP2_04890	222.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0033986_26	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0033986_26	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0033986_26	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-0033986_27	K10804	44.4	0.0000000000025	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-0033986_27	phrog_16164	68.5	5.4e-20	N/A	unknown function
Pfam	UHGV-0033986_27	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
PHROG	UHGV-0033986_29	phrog_1067	170.7	0	minor head protein	head and packaging
UniRef90	UHGV-0033986_29	UniRef90_A0A2A7AM44	716.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0033986_29	1123263.AUKY01000068_gene489	191.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0033986_29	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0033986_29	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0033986_29	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0033986_29	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_30	phrog_33	80.5	3.7e-23	distal tail protein Dit	tail
UniRef90	UHGV-0033986_30	UniRef90_A0A173Z1X4	143.0	1.38e-38	Phage-related protein	N/A
eggNOG-mapper	UHGV-0033986_30	908340.HMPREF9406_2569	94.0	1.76e-20	phage tail	N/A
NCBIFam	UHGV-0033986_30	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0033986_30	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0033986_30	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_31	phrog_9959	86.4	1.8e-25	tail length tape measure protein	tail
UniRef90	UHGV-0033986_31	UniRef90_A0A2A7ALS3	884.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033986_31	1111131.HMPREF1255_1479	163.0	2.28e-38	phage tail tape measure protein	N/A
Pfam	UHGV-0033986_31	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0033986_31	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0033986_31	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0033986_31	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_34	phrog_88	95.6	5.4e-28	major tail protein	tail
UniRef90	UHGV-0033986_34	UniRef90_G9YSC5	111.0	2.89e-27	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0033986_34	33035.JPJF01000039_gene278	71.2	0.00000000000146	N/A	N/A
NCBIFam	UHGV-0033986_34	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0033986_34	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_35	phrog_5	49.3	0.000000000000086	tail completion or Neck1 protein	connector
UniRef90	UHGV-0033986_35	UniRef90_A0A1C6FG30	130.0	2.08e-35	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0033986_35	908340.HMPREF9406_2573	110.0	2.84e-28	N/A	N/A
structural_annotation	UHGV-0033986_35	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033986_36	999413.HMPREF1094_02005	74.3	7.75e-16	N/A	N/A
structural_annotation	UHGV-0033986_36	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_37	phrog_19734	92.9	3e-27	N/A	unknown function
UniRef90	UHGV-0033986_37	UniRef90_A0A0D8I708	78.2	5.3e-16	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0033986_37	349161.Dred_2602	72.4	0.0000000000000154	N/A	N/A
structural_annotation	UHGV-0033986_37	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_38	phrog_749	58.2	1.4e-16	N/A	unknown function
UniRef90	UHGV-0033986_38	UniRef90_W7B6R4	51.2	0.00000407	Gp6 protein	N/A
eggNOG-mapper	UHGV-0033986_38	1211817.CCAT010000053_gene2133	65.5	0.00000000000198	N/A	N/A
PHROG	UHGV-0033986_39	phrog_10	127.5	8.9e-38	major head protein	head and packaging
UniRef90	UHGV-0033986_39	UniRef90_A0A2A7B712	725.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0033986_39	1235792.C808_00086	443.0	0	Phage capsid family	N/A
Pfam	UHGV-0033986_39	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0033986_39	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0033986_39	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0033986_39	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0033986_39	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0033986_40	K01358	75.4	1e-21	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0033986_40	phrog_94	129.0	5.6e-38	head maturation protease	head and packaging
UniRef90	UHGV-0033986_40	UniRef90_UPI00111E41DA	137.0	1.52e-36	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0033986_40	1232452.BAIB02000007_gene1626	129.0	8.77e-34	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0033986_40	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0033986_40	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0033986_40	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_41	phrog_12	123.2	1.9e-36	portal protein	head and packaging
UniRef90	UHGV-0033986_41	UniRef90_A0A2A7B6S8	548.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0033986_41	349161.Dred_2606	258.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0033986_41	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0033986_41	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0033986_41	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0033986_41	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_42	phrog_9	236.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0033986_42	UniRef90_A0A2A7ALT4	1056.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0033986_42	610130.Closa_0741	634.0	0	Phage Terminase	N/A
Pfam	UHGV-0033986_42	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0033986_42	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0033986_42	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_43	phrog_13845	56.2	4.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0033986_43	1399942.U3PDR2_9CAUD	65.9	0.00000000000319	N/A	N/A
structural_annotation	UHGV-0033986_43	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_44	phrog_119	57.7	1.8e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033986_44	UniRef90_A0A2A7B6I3	231.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0033986_44	610130.Closa_0739	109.0	2.21e-29	HNH nucleases	N/A
Pfam	UHGV-0033986_44	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0033986_44	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0033986_51	PF14354	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_52	phrog_7711	108.8	3.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-0033986_52	1304866.K413DRAFT_1204	110.0	2.15e-29	N/A	N/A
structural_annotation	UHGV-0033986_53	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0033986_54	K03497	89.6	6.5e-26	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0033986_54	phrog_4715	117.4	1.3e-34	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033986_54	UniRef90_A0A2A7AMC5	298.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0033986_54	411471.SUBVAR_05842	182.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0033986_54	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0033986_54	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0033986_54	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0033986_55	K03496	207.4	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0033986_55	phrog_164	153.1	1.4013e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033986_55	UniRef90_A0A2A7B6H3	358.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033986_55	411471.SUBVAR_05839	228.0	0	AAA domain	N/A
Pfam	UHGV-0033986_55	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0033986_55	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0033986_55	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_56	phrog_6969	57.1	2.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0033986_56	748224.HMPREF9436_00735	157.0	1.20512e-43	N/A	N/A
Pfam	UHGV-0033986_56	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-0033986_56	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-0033986_56	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0033986_56	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0033986_57	K03111	147.9	9.94922e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0033986_57	phrog_44	150.6	8.40779e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033986_57	UniRef90_A0A329TTF5	204.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0033986_57	748224.HMPREF9436_00638	214.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0033986_57	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0033986_57	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0033986_57	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0033986_57	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0033986_57	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_58	phrog_7566	86.7	1.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-0033986_58	411471.SUBVAR_05830	107.0	5.55e-29	N/A	N/A
PHROG	UHGV-0033986_60	phrog_72	47.5	0.00000000000034	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0033986_60	411471.SUBVAR_05829	135.0	8.33e-38	N/A	N/A
structural_annotation	UHGV-0033986_60	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0033986_61	phrog_14970	46.0	0.000000000001	N/A	unknown function
COG	UHGV-0033986_61	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0033986_61	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033986_64	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A
KOfam	UHGV-0033986_69	K14060	110.5	9.8e-33	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0033986_69	phrog_125	149.8	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033986_69	UniRef90_A0A0D8IU11	254.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-0033986_69	1297617.JPJD01000058_gene1031	247.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0033986_69	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0033986_69	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0033986	Yes	42,654	53	100	1