vOTU vOTU-044332

vOTU: vOTU-044332

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044332
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-01395 → vGENUS-02189 → vSUBGEN-22145 → vOTU-044332
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0033991
Biosample ID	SAMEA4765718
Genome length (bp)	41,769 bps
CheckV completeness	100.00% (Complete)
CDS count	59
CDS density	90.67%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	60	Host agreement	70
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0033991_2	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_3	phrog_10091	102.6	3.1e-30	holin	lysis
UniRef90	UHGV-0033991_3	UniRef90_A0A1Y4RHF4	127.0	8.11e-37	Phage holin	N/A
eggNOG-mapper	UHGV-0033991_3	97139.C824_05950	116.0	4.82e-33	Bacteriophage holin	N/A
Pfam	UHGV-0033991_3	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0033991_3	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0033991_3	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033991_3	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_4	phrog_1863	59.6	3.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0033991_4	748224.HMPREF9436_01412	92.4	9.13e-24	N/A	N/A
KOfam	UHGV-0033991_5	K08640	69.0	9e-20	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0033991_5	phrog_2649	49.6	3e-16	endolysin	lysis
UniRef90	UHGV-0033991_5	UniRef90_UPI001C12323B	101.0	2.93e-23	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0033991_5	1304880.JAGB01000001_gene697	55.8	0.00000294	Peptidoglycan binding domain	N/A
Pfam	UHGV-0033991_5	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0033991_5	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0033991_5	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0033991_5	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_7	phrog_366	43.8	0.0000000000033	tail fiber protein	tail
UniRef90	UHGV-0033991_7	UniRef90_UPI0018835F0C	205.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0033991_7	476272.RUMHYD_00002	105.0	8.62e-21	N/A	N/A
structural_annotation	UHGV-0033991_7	PF10651,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_8	phrog_2310	55.4	5.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0033991_8	1151292.QEW_0364	46.2	0.00000724	N/A	N/A
PHROG	UHGV-0033991_10	phrog_2295	59.9	5.3e-19	N/A	unknown function
Pfam	UHGV-0033991_10	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0033991_10	PF14686,TIGR03000,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_11	phrog_13141	46.4	0.00000000000045	N/A	unknown function
PHROG	UHGV-0033991_12	phrog_156	106.5	7.8e-32	portal protein	head and packaging
eggNOG-mapper	UHGV-0033991_12	693746.OBV_01670	510.0	0	N/A	N/A
structural_annotation	UHGV-0033991_12	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_14	phrog_422	112.9	2.7e-33	major head protein	head and packaging
UniRef90	UHGV-0033991_14	UniRef90_A0A6A8VJ17	258.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0033991_14	1408437.JNJN01000001_gene1710	175.0	0	N/A	N/A
Pfam	UHGV-0033991_14	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0033991_14	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0033991_16	K06909	147.4	1.20512e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0033991_16	phrog_979	118.3	1.1e-36	terminase large subunit	head and packaging
UniRef90	UHGV-0033991_16	UniRef90_A0A1Y3RJJ5	442.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033991_16	693746.OBV_01690	429.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0033991_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0033991_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0033991_16	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033991_17	UniRef90_UPI0001B2B2BE	57.0	0.00000000115	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0033991_17	397290.C810_03591	53.5	0.00000000486	Cysteine-rich KTR	N/A
Pfam	UHGV-0033991_17	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0033991_21	PF03869,NF010256	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_22	phrog_15863	48.3	9.8e-21	N/A	unknown function
UniRef90	UHGV-0033991_22	UniRef90_UPI00068FC51E	340.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0033991_22	1519439.JPJG01000053_gene1369	340.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-0033991_22	PF18847	N/A	N/A	Large polyvalent protein associated domain 29	LPD29
COG	UHGV-0033991_22	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
eggNOG-mapper	UHGV-0033991_26	1519439.JPJG01000011_gene53	184.0	1.13505e-43	N/A	N/A
Pfam	UHGV-0033991_26	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
eggNOG-mapper	UHGV-0033991_28	693746.OBV_01730	64.7	0.000000000023	N/A	N/A
structural_annotation	UHGV-0033991_28	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033991_29	UniRef90_A0A4D7ASB8	311.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033991_29	693746.OBV_01680	322.0	0	N/A	N/A
structural_annotation	UHGV-0033991_29	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033991_30	UniRef90_UPI001C01A488	132.0	5.36e-37	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0033991_30	561177.ANHYDRO_01396	76.3	8.75e-16	Endodeoxyribonuclease RusA	N/A
COG	UHGV-0033991_30	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0033991_30	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0033991_31	K03111	133.9	1.9e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0033991_31	phrog_44	142.1	3.30006e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033991_31	UniRef90_A0A3D2HZK1	178.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0033991_31	1226322.HMPREF1545_04080	163.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0033991_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0033991_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0033991_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0033991_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0033991_31	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
Pfam	UHGV-0033991_36	PF04448	N/A	N/A	N/A	DUF551
eggNOG-mapper	UHGV-0033991_38	1007096.BAGW01000031_gene122	64.3	0.0000000000524	PFAM Radical SAM	N/A
COG	UHGV-0033991_38	COG1533	N/A	N/A	DNA repair photolyase	N/A
PHROG	UHGV-0033991_39	phrog_9804	153.5	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0033991_39	UniRef90_A0A3D1LDS2	171.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0033991_39	1121344.JHZO01000003_gene981	164.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0033991_39	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0033991_39	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_40	phrog_15768	60.6	3.4e-19	N/A	unknown function
UniRef90	UHGV-0033991_40	UniRef90_R6RVQ1	102.0	1.15e-22	Chromosome segregation ATPases	N/A
eggNOG-mapper	UHGV-0033991_40	1121344.JHZO01000003_gene982	112.0	8.96e-28	N/A	N/A
AcrCatalog	UHGV-0033991_40	cluster_14472	71.2	1.54e-16	NA	N/A
Pfam	UHGV-0033991_40	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0033991_40	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0033991_41	K06167	51.7	0.000000000000013	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0033991_41	phrog_392	102.4	6.2e-30	metal-dependent hydrolase	other
UniRef90	UHGV-0033991_41	UniRef90_A0A350XZ09	160.0	1.4013e-45	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0033991_41	665956.HMPREF1032_03101	158.0	1.4013e-45	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0033991_41	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0033991_41	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0033991_41	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_42	phrog_3657	339.3	0	N/A	unknown function
UniRef90	UHGV-0033991_42	UniRef90_UPI001DC4E782	273.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0033991_42	411461.DORFOR_00020	285.0	0	N/A	N/A
PHROG	UHGV-0033991_43	phrog_674	103.0	1.8e-30	N/A	unknown function
UniRef90	UHGV-0033991_43	UniRef90_A0A7X9JQ21	118.0	4.6e-28	N/A	N/A
eggNOG-mapper	UHGV-0033991_43	1408437.JNJN01000039_gene373	113.0	1.2e-26	N/A	N/A
Pfam	UHGV-0033991_43	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0033991_43	PF07083	N/A	N/A	N/A	N/A
Pfam	UHGV-0033991_44	PF06827	N/A	N/A	Zinc finger found in FPG and IleRS	zf-FPG_IleRS
KOfam	UHGV-0033991_45	K07699	52.5	0.0000000000000069	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
UniRef90	UHGV-0033991_45	UniRef90_A0A354MSK6	62.4	0.00000000105	Spo0A_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0033991_45	537013.CLOSTMETH_03331	54.3	0.000000112	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process	N/A
Pfam	UHGV-0033991_45	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-0033991_45	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
structural_annotation	UHGV-0033991_45	PF08769,TIGR02875	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033991_47	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_51	phrog_1305	133.4	1.2e-39	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033991_51	UniRef90_A0A3E3DUL7	170.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033991_51	420246.GTNG_2077	137.0	2.74e-37	N/A	N/A
structural_annotation	UHGV-0033991_51	COG2250	N/A	N/A	N/A	N/A
PHROG	UHGV-0033991_52	phrog_14088	43.0	0.0000000000044	N/A	unknown function
UniRef90	UHGV-0033991_52	UniRef90_UPI001655B004	62.8	0.0000000000127	carboxypeptidase	N/A
eggNOG-mapper	UHGV-0033991_52	642492.Clole_1841	52.0	0.0000000379	N/A	N/A
KOfam	UHGV-0033991_53	K22300	63.5	4.7e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0033991_53	phrog_8	43.6	0.0000000000047	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033991_53	UniRef90_A0A354UTE4	166.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0033991_53	1235797.C816_03553	80.5	9.58e-17	DNA-binding helix-turn-helix protein	N/A
PADLOC	UHGV-0033991_53	retron_type_VI_hth_cluster2_1	41.4	0.000000000029	N/A	Retron
Pfam	UHGV-0033991_53	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0033991_53	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0033991_53	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033991_56	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0033991_57	K14059	113.8	9.7e-34	int; integrase	N/A
PHROG	UHGV-0033991_57	phrog_1	145.2	5.49309e-43	integrase	integration and excision
UniRef90	UHGV-0033991_57	UniRef90_A0A3D3Y0G6	270.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0033991_57	693746.OBV_41260	228.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0033991_57	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0033991_57	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0033991_57	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0033991	Yes	41,769	55	100	1
UHGV-1420810	No	32,787	54	79	1
UHGV-0029015	No	32,154	55	77	1
UHGV-0138861	No	22,762	53	55	1
UHGV-1467153	No	22,762	53	55	1
UHGV-1424898	No	22,631	53	55	1
UHGV-0200956	No	20,802	54	51	1
UHGV-1755418	No	13,493	56	32	1