vOTU vOTU-044375

vOTU: vOTU-044375

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044375
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00259 → vSUBFAM-04913 → vGENUS-09499 → vSUBGEN-11244 → vOTU-044375
Host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77
Host range breadth	Order
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0034521
Biosample ID	SAMEA4765639
Genome length (bp)	43,144 bps
CheckV completeness	100.00% (Complete)
CDS count	65
CDS density	94.46%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77	Total connections	18	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-273 → CAG-273 sp902406115	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0034521_1	K07729	51.5	0.00000000000002	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0034521_1	phrog_8	66.5	5.9e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0034521_1	UniRef90_UPI0012D367EF	73.9	0.00000000000000453	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0034521_1	246194.CHY_1697	75.5	0.00000000000000185	Peptidase S24-like	N/A
Pfam	UHGV-0034521_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0034521_1	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0034521_1	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0034521_2	K01356	76.9	4.1e-22	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0034521_2	phrog_4	71.9	1.3e-20	transcriptional repressor	transcription regulation
UniRef90	UHGV-0034521_2	UniRef90_A0A355KVQ5	84.3	5.73e-19	Peptidase_S24 domain-containing protein	N/A
eggNOG-mapper	UHGV-0034521_2	500633.CLOHIR_00339	92.8	5.24e-22	Peptidase S24-like	N/A
Pfam	UHGV-0034521_2	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0034521_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0034521_2	PF00717,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0034521_4	K06400	284.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0034521_4	phrog_95	307.5	0	integrase	integration and excision
UniRef90	UHGV-0034521_4	UniRef90_A0A354MBI4	469.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0034521_4	1128398.Curi_c22150	408.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0034521_4	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0034521_4	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0034521_4	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0034521_4	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0034521_8	phrog_3754	74.3	2.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0034521_8	1226322.HMPREF1545_00073	70.5	0.0000000000000512	N/A	N/A
structural_annotation	UHGV-0034521_10	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0034521_11	phrog_16490	148.0	4.34403e-44	N/A	unknown function
eggNOG-mapper	UHGV-0034521_11	476272.RUMHYD_01770	72.4	0.00000000000214	N/A	N/A
eggNOG-mapper	UHGV-0034521_13	476272.RUMHYD_01952	54.7	0.000000197	N/A	N/A
KOfam	UHGV-0034521_14	K01447	117.7	1.2e-34	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0034521_14	phrog_1794	131.5	8e-39	amidase	lysis
UniRef90	UHGV-0034521_14	UniRef90_A0A1V5S1N9	197.0	0	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
eggNOG-mapper	UHGV-0034521_14	411470.RUMGNA_02087	162.0	7.00649e-45	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0034521_14	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0034521_14	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0034521_15	1211817.CCAT010000041_gene3732	51.6	0.000000537	N/A	N/A
PHROG	UHGV-0034521_16	phrog_2579	44.5	0.00000000000077	ParB C-terminal domain	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0034521_16	1408437.JNJN01000060_gene452	364.0	0	heme binding	N/A
Pfam	UHGV-0034521_16	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0034521_16	PF04002	N/A	N/A	RadC-like JAB domain	RadC
COG	UHGV-0034521_16	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0034521_18	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034521_19	PF20387	N/A	N/A	N/A	N/A
Pfam	UHGV-0034521_20	PF12708	N/A	N/A	Pectate lyase superfamily protein	Pectate_lyase_3
PHROG	UHGV-0034521_21	phrog_18593	51.6	0.000000000000022	N/A	unknown function
UniRef90	UHGV-0034521_21	UniRef90_A0A1C6ALA8	124.0	1.08e-32	Carbohydrate binding domain	N/A
eggNOG-mapper	UHGV-0034521_21	552398.HMPREF0866_03095	118.0	1.18e-30	N/A	N/A
Pfam	UHGV-0034521_21	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
COG	UHGV-0034521_23	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0034521_24	phrog_371	111.7	7e-33	major head protein	head and packaging
UniRef90	UHGV-0034521_24	UniRef90_UPI001C8E7337	171.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-0034521_24	2342.SOPEG_2715	57.4	0.00000139	Mu-like prophage major head subunit gpT	N/A
Pfam	UHGV-0034521_24	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
COG	UHGV-0034521_24	COG4397	N/A	N/A	Mu-like prophage major head subunit gpT	N/A
structural_annotation	UHGV-0034521_28	PF12236,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0034521_30	K06909	196.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0034521_30	phrog_3717	108.3	2.1e-40	terminase large subunit	head and packaging
UniRef90	UHGV-0034521_30	UniRef90_A0A3S1ABC6	414.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0034521_30	696281.Desru_1088	385.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0034521_30	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0034521_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0034521_30	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0034521_31	K07474	122.0	8.2e-36	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0034521_31	phrog_51	140.0	1.29998e-41	terminase small subunit	head and packaging
UniRef90	UHGV-0034521_31	UniRef90_UPI0006A4EA72	190.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0034521_31	445335.CBN_2993	164.0	0	Terminase small subunit	N/A
Pfam	UHGV-0034521_31	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0034521_31	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0034521_31	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0034521_33	phrog_36	58.7	1.2e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0034521_33	UniRef90_A0A8A7K4C0	63.9	0.000000000281	N/A	N/A
eggNOG-mapper	UHGV-0034521_33	697281.Mahau_0564	59.7	0.00000000218	phage transcriptional regulator, RinA family	N/A
Pfam	UHGV-0034521_33	PF07374	N/A	N/A	N/A	DUF1492
NCBIFam	UHGV-0034521_33	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0034521_33	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0034521_42	phrog_355	49.5	0.000000000000063	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034521_42	UniRef90_UPI0013ED9517	98.2	4.72e-24	N/A	N/A
eggNOG-mapper	UHGV-0034521_42	97138.C820_00250	82.0	5.39e-19	N/A	N/A
Pfam	UHGV-0034521_42	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0034521_42	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0034521_43	phrog_98	96.5	2.1e-28	N/A	unknown function
UniRef90	UHGV-0034521_43	UniRef90_UPI0009EBA27F	70.1	0.00000000000135	YopX family protein	N/A
eggNOG-mapper	UHGV-0034521_43	447909.A6M997_9VIRU	58.9	0.00000000366	YopX protein	N/A
Pfam	UHGV-0034521_43	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0034521_43	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0034521_43	PF09643,TIGR01671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034521_44	PF09871,TIGR00739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034521_46	397290.C810_01505	102.0	3.73e-27	N/A	N/A
PHROG	UHGV-0034521_49	phrog_244	79.5	5.1e-23	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0034521_49	1280692.AUJL01000025_gene2095	127.0	2.93e-36	N/A	N/A
structural_annotation	UHGV-0034521_49	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0034521_51	phrog_4973	52.8	0.0000000000000063	N/A	unknown function
UniRef90	UHGV-0034521_51	UniRef90_A0A843HM15	53.1	0.000000134	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0034521_51	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0034521_51	PF14090,NF040939	N/A	N/A	N/A	N/A
KOfam	UHGV-0034521_52	K02086	65.7	6.9e-19	dnaD; DNA replication protein	N/A
PHROG	UHGV-0034521_52	phrog_16304	89.4	3.6e-26	N/A	unknown function
UniRef90	UHGV-0034521_52	UniRef90_R6N6L5	112.0	1.74e-27	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0034521_52	1158294.JOMI01000009_gene1122	99.8	1.7e-22	N/A	N/A
Pfam	UHGV-0034521_52	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0034521_52	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0034521_52	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-0034521_52	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0034521_54	K03111	138.7	6.09999e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0034521_54	phrog_44	144.9	4.1058e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034521_54	UniRef90_R6XT61	194.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0034521_54	509191.AEDB02000052_gene1361	171.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0034521_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0034521_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0034521_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0034521_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0034521_54	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034521_55	UniRef90_A0A498G0X0	50.8	0.00000323	HNH endonuclease	N/A
Pfam	UHGV-0034521_55	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0034521_55	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0034521_56	phrog_72	57.6	2.2e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034521_56	UniRef90_A0A8D9PDS2	145.0	8.41003e-41	NinB protein	N/A
eggNOG-mapper	UHGV-0034521_56	508419.F8J186_9CAUD	142.0	1.14e-40	N/A	N/A
structural_annotation	UHGV-0034521_56	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0034521_57	phrog_392	139.8	1.99993e-41	metal-dependent hydrolase	other
UniRef90	UHGV-0034521_57	UniRef90_R5PYB3	400.0	0	Metallo-beta-lactamase domain protein	N/A
eggNOG-mapper	UHGV-0034521_57	665956.HMPREF1032_03101	199.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0034521_57	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0034521_57	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0034521_57	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0034521_58	phrog_2760	205.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034521_58	UniRef90_R7FH02	368.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0034521_58	596323.HMPREF0554_0900	191.0	0	Phage recombination protein Bet	N/A
Pfam	UHGV-0034521_58	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0034521_58	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0034521_58	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0034521_58	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0034521_59	phrog_674	161.8	0	N/A	unknown function
UniRef90	UHGV-0034521_59	UniRef90_A0A7X9AE52	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034521_59	665956.HMPREF1032_03103	194.0	0	N/A	N/A
Pfam	UHGV-0034521_59	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0034521_59	PF07083	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034521_62	UniRef90_A0A1M4SQG4	72.4	0.00000000000000967	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0034521_62	1031288.AXAA01000001_gene2333	72.4	0.00000000000000162	Lysin motif	N/A
Pfam	UHGV-0034521_62	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0034521_62	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0034521_62	PF01476,MF_02014,NF010723,COG1388	N/A	N/A	N/A	N/A
KOfam	UHGV-0034521_64	K20480	40.0	0.000000000058	nprR, nprA; HTH-type transcriptional regulator, quorum sensing regulator NprR	N/A
UniRef90	UHGV-0034521_64	UniRef90_R5M8C1	49.7	0.00000696	Predicted transcriptional regulators	N/A
Pfam	UHGV-0034521_64	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0034521_64	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0034521_65	UniRef90_A0A096DPD8	51.6	0.000000409	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0034521_65	511437.Lbuc_1451	49.3	0.00000052	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0034521_65	retron_type_VI_hth_cluster2_1	42.5	0.000000000019	N/A	Retron
Pfam	UHGV-0034521_65	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0034521_65	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0034521	Yes	43,144	31	100	1