vOTU vOTU-044427

vOTU: vOTU-044427

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044427
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-02710 → vGENUS-03462 → vSUBGEN-02841 → vOTU-044427
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → HGM13006
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0035155
Biosample ID	SAMEA4969195
Genome length (bp)	36,961 bps
CheckV completeness	100.00% (Complete)
CDS count	58
CDS density	93.51%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → HGM13006	Total connections	9	Host agreement	88.89
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0035155_1	phrog_5810	73.2	4.8e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035155_1	UniRef90_UPI00164BB1D1	189.0	0	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0035155_1	411490.ANACAC_00800	170.0	0	N/A	N/A
structural_annotation	UHGV-0035155_1	PF01978,MF_01819,NF041413,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0035155_5	K00390	123.6	1.3e-36	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0035155_5	phrog_424	127.3	9e-38	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0035155_5	UniRef90_A0A1Y4LU27	421.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-0035155_5	1408437.JNJN01000032_gene2312	351.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0035155_5	BrxP_00001	72.1	2e-21	BrxP	BREX
Pfam	UHGV-0035155_5	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0035155_5	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0035155_5	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_6	phrog_38832	58.1	1.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0035155_6	665956.HMPREF1032_00143	71.2	0.000000000000197	N/A	N/A
PHROG	UHGV-0035155_8	phrog_36	58.5	1.3e-16	transcriptional regulator	transcription regulation
COG	UHGV-0035155_8	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0035155_8	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_9	phrog_309	183.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-0035155_9	UniRef90_A0A1C7FRC2	224.0	0	Transposase	N/A
eggNOG-mapper	UHGV-0035155_9	1408437.JNJN01000045_gene597	189.0	0	HNH endonuclease	N/A
Pfam	UHGV-0035155_9	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0035155_9	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0035155_9	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0035155_10	K06909	375.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0035155_10	phrog_5653	132.6	1.4e-39	terminase large subunit	head and packaging
UniRef90	UHGV-0035155_10	UniRef90_R5AG08	598.0	0	Phage terminase	N/A
eggNOG-mapper	UHGV-0035155_10	411471.SUBVAR_06507	506.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0035155_10	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0035155_10	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0035155_10	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0035155_10	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0035155_10	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_11	phrog_533	306.7	0	portal protein	head and packaging
UniRef90	UHGV-0035155_11	UniRef90_A0A173Y8E3	375.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0035155_11	641112.ACOK01000073_gene2889	216.0	0	N/A	N/A
Pfam	UHGV-0035155_11	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0035155_11	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_12	phrog_581	315.4	0	minor head protein	head and packaging
UniRef90	UHGV-0035155_12	UniRef90_UPI0006832D02	368.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0035155_12	936375.HMPREF1152_1071	345.0	0	N/A	N/A
Pfam	UHGV-0035155_12	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0035155_12	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035155_12	PF06152,PF12106	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_14	phrog_194	82.1	8.8e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-0035155_14	UniRef90_UPI000B35FF41	207.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0035155_14	663278.Ethha_0497	145.0	1.93001e-41	N/A	N/A
Pfam	UHGV-0035155_14	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0035155_14	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_15	phrog_422	242.1	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0035155_15	693746.OBV_18090	391.0	0	N/A	N/A
structural_annotation	UHGV-0035155_15	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_16	phrog_541	42.7	0.0000000000088	head-tail adaptor	connector
eggNOG-mapper	UHGV-0035155_16	1120998.AUFC01000030_gene2237	57.0	0.00000000628	N/A	N/A
PHROG	UHGV-0035155_17	phrog_3366	69.6	5.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0035155_17	645991.Sgly_0343	80.1	1.6e-17	N/A	N/A
structural_annotation	UHGV-0035155_17	PF20536,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_18	phrog_556	65.0	1.3e-18	minor head protein	head and packaging
UniRef90	UHGV-0035155_18	UniRef90_UPI000F63A4E5	90.1	6.17e-21	minor capsid protein	N/A
Pfam	UHGV-0035155_18	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0035155_18	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_19	phrog_3266	126.0	1.6e-37	tail completion	connector
UniRef90	UHGV-0035155_19	UniRef90_UPI000F637EFF	131.0	1.79e-36	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0035155_19	545697.HMPREF0216_02854	98.6	2.03e-24	N/A	N/A
structural_annotation	UHGV-0035155_19	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_20	phrog_820	46.7	0.0000000000005	major tail protein	tail
eggNOG-mapper	UHGV-0035155_20	665956.HMPREF1032_02945	110.0	1.3e-28	N/A	N/A
structural_annotation	UHGV-0035155_20	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035155_21	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_22	phrog_706	95.8	4.5e-28	N/A	unknown function
UniRef90	UHGV-0035155_22	UniRef90_UPI0006828F20	100.0	5.87e-23	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0035155_22	411460.RUMTOR_02091	75.5	0.0000000000000237	COG NOG24969 non supervised orthologous group	N/A
Pfam	UHGV-0035155_22	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0035155_22	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_23	phrog_28775	220.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0035155_23	742740.HMPREF9474_01203	234.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0035155_23	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0035155_23	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0035155_23	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0035155_23	PF10145,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_24	phrog_33	48.1	0.00000000000027	distal tail protein Dit	tail
structural_annotation	UHGV-0035155_24	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_25	phrog_18110	128.1	5.3e-38	N/A	unknown function
UniRef90	UHGV-0035155_25	UniRef90_UPI00189BED7C	280.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0035155_25	1120933.ATUY01000004_gene1009	122.0	2.67e-26	Prophage endopeptidase tail	N/A
Pfam	UHGV-0035155_25	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0035155_25	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0035155_25	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0035155_25	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
Pfam	UHGV-0035155_26	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0035155_29	phrog_1863	67.6	1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0035155_29	748224.HMPREF9436_01412	99.4	1.72e-26	N/A	N/A
PHROG	UHGV-0035155_30	phrog_1129	62.2	6.6e-18	holin	lysis
UniRef90	UHGV-0035155_30	UniRef90_A0A1H3XEH1	110.0	5.03e-30	Phage holin family Hol44, holin superfamily V	N/A
eggNOG-mapper	UHGV-0035155_30	1226322.HMPREF1545_00069	109.0	2.49e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0035155_30	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0035155_30	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0035155_31	K07273	185.3	0	acm; lysozyme	N/A
PHROG	UHGV-0035155_31	phrog_291	147.9	8.82818e-44	endolysin	lysis
UniRef90	UHGV-0035155_31	UniRef90_A0A6S6X8V6	181.0	0	Putative Lysozyme	N/A
eggNOG-mapper	UHGV-0035155_31	999411.HMPREF1092_03301	144.0	1.26e-37	family 25	N/A
Pfam	UHGV-0035155_31	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0035155_31	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-0035155_31	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0035155_31	PF01183,PF19127,TIGR04035,TIGR04303,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-0035155_32	UniRef90_A0A350H2J1	52.0	0.000000247	HTH luxR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0035155_32	1235790.C805_00057	47.4	0.00000251	N/A	N/A
structural_annotation	UHGV-0035155_32	PF13404,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0035155_33	K07726	50.8	0.000000000000033	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0035155_33	phrog_2104	52.2	0.000000000000011	N/A	unknown function
UniRef90	UHGV-0035155_33	UniRef90_A0A355NLF8	57.0	0.00000000167	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0035155_33	1121296.JONJ01000006_gene2191	58.5	0.000000000388	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0035155_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0035155_33	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
PHROG	UHGV-0035155_37	phrog_22984	43.1	0.0000000000079	N/A	unknown function
PHROG	UHGV-0035155_38	phrog_16490	53.4	0.0000000000000059	N/A	unknown function
eggNOG-mapper	UHGV-0035155_38	397290.C810_05212	61.6	0.0000000129	N/A	N/A
structural_annotation	UHGV-0035155_39	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0035155_40	1408437.JNJN01000043_gene801	72.4	0.000000000000171	N/A	N/A
KOfam	UHGV-0035155_41	K14059	116.0	5.5e-34	int; integrase	N/A
PHROG	UHGV-0035155_41	phrog_1	133.7	1.9e-39	integrase	integration and excision
UniRef90	UHGV-0035155_41	UniRef90_UPI00195CC1EE	458.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0035155_41	698758.AXY_01580	102.0	7.92e-22	Phage integrase family	N/A
Pfam	UHGV-0035155_41	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0035155_41	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0035155_41	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0035155_41	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035155_42	PF13560,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_44	phrog_4980	120.5	1.7e-35	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0035155_44	UniRef90_K1RPW2	115.0	1.09e-27	S-layer domain protein (Fragment)	N/A
eggNOG-mapper	UHGV-0035155_44	411467.BACCAP_04702	125.0	1.21e-29	S-layer homology domain	N/A
Pfam	UHGV-0035155_44	PF00395	N/A	N/A	S-layer homology domain	SLH
Pfam	UHGV-0035155_44	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-0035155_44	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
KOfam	UHGV-0035155_45	K22300	50.5	0.000000000000049	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0035155_45	UniRef90_A0A1C5PSE5	96.3	1.71e-23	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-0035155_45	1235797.C816_03553	87.8	2.61e-20	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0035155_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0035155_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0035155_45	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0035155_48	UniRef90_UPI000F0633F9	66.2	0.000000000000684	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0035155_48	693746.OBV_43260	65.9	0.000000000000167	N/A	N/A
structural_annotation	UHGV-0035155_48	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_53	phrog_7964	261.5	0	N/A	unknown function
UniRef90	UHGV-0035155_53	UniRef90_UPI00103291C8	89.7	1.29e-17	polymer-forming cytoskeletal protein	N/A
eggNOG-mapper	UHGV-0035155_53	1280692.AUJL01000012_gene3222	78.2	8.83e-16	N/A	N/A
Pfam	UHGV-0035155_53	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
structural_annotation	UHGV-0035155_53	MF_01691,NF040481	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035155_54	PF00412	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_55	phrog_434	286.6	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035155_55	UniRef90_UPI001BB47349	346.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0035155_55	1226322.HMPREF1545_00014	323.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0035155_55	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0035155_55	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0035155_55	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0035155_55	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0035155_56	K07455	294.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0035155_56	phrog_148	271.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035155_56	UniRef90_U2SBP2	385.0	0	Recombination and repair protein RecT	N/A
eggNOG-mapper	UHGV-0035155_56	1226322.HMPREF1545_00015	385.0	0	RecT family	N/A
Pfam	UHGV-0035155_56	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0035155_56	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0035155_56	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0035155_56	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0035155_57	K03111	139.1	5.10003e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0035155_57	phrog_44	143.2	1.60028e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035155_57	UniRef90_A0A2V2CEG7	203.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0035155_57	693746.OBV_12860	200.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0035155_57	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0035155_57	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0035155_57	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0035155_57	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0035155_57	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0035155_58	phrog_244	45.8	0.0000000000015	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0035155_58	1200557.JHWV01000001_gene280	83.2	1.25e-19	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0035155	Yes	36,961	54	100	1
UHGV-0220910	No	14,182	54	39	1