vOTU vOTU-044455

vOTU: vOTU-044455

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044455
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-00184 → vGENUS-01863 → vSUBGEN-30516 → vOTU-044455
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0035508
Biosample ID	N/A
Genome length (bp)	39,206 bps
CheckV completeness	100.00% (Complete)
CDS count	57
CDS density	90.45%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	66	Host agreement	80.3
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0035508_1	phrog_37900	48.9	0.000000000000039	N/A	unknown function
eggNOG-mapper	UHGV-0035508_1	552398.HMPREF0866_03098	57.0	0.000000728	N/A	N/A
COG	UHGV-0035508_1	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
PHROG	UHGV-0035508_2	phrog_31688	41.4	0.000000000018	N/A	unknown function
eggNOG-mapper	UHGV-0035508_2	1121866.AUGK01000006_gene893	83.6	0.0000000000000237	N/A	N/A
UniRef90	UHGV-0035508_3	UniRef90_A0A1C6H462	371.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0035508_3	1408437.JNJN01000060_gene452	390.0	0	heme binding	N/A
Pfam	UHGV-0035508_3	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
COG	UHGV-0035508_3	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
eggNOG-mapper	UHGV-0035508_6	1408437.JNJN01000087_gene969	58.9	0.000000128	N/A	N/A
PHROG	UHGV-0035508_7	phrog_156	130.8	7e-39	portal protein	head and packaging
eggNOG-mapper	UHGV-0035508_7	693746.OBV_01670	617.0	0	N/A	N/A
structural_annotation	UHGV-0035508_7	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0035508_9	UniRef90_A0A4D7ASB8	503.0	0	N/A	N/A
eggNOG-mapper	UHGV-0035508_9	693746.OBV_01680	508.0	0	N/A	N/A
structural_annotation	UHGV-0035508_9	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0035508_10	phrog_422	129.5	2.5e-38	major head protein	head and packaging
UniRef90	UHGV-0035508_10	UniRef90_A0A6A8VJ17	332.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0035508_10	1408437.JNJN01000001_gene1710	226.0	0	N/A	N/A
Pfam	UHGV-0035508_10	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0035508_10	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0035508_11	phrog_14606	45.6	0.0000000000008	N/A	unknown function
eggNOG-mapper	UHGV-0035508_11	755731.Clo1100_2435	82.0	0.00000000000000377	N/A	N/A
structural_annotation	UHGV-0035508_12	PF18152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0035508_13	1519439.JPJG01000011_gene57	110.0	3.26e-29	N/A	N/A
structural_annotation	UHGV-0035508_13	PF11650	N/A	N/A	N/A	N/A
KOfam	UHGV-0035508_14	K06909	150.9	9.80909e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0035508_14	phrog_979	132.3	9.60002e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0035508_14	UniRef90_A0A810QAS9	547.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0035508_14	693746.OBV_01690	537.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0035508_14	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0035508_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0035508_14	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0035508_16	phrog_13890	78.7	4.1e-23	N/A	unknown function
UniRef90	UHGV-0035508_16	UniRef90_A0A6N3FVH7	80.5	9.95e-19	Arc domain-containing protein	N/A
eggNOG-mapper	UHGV-0035508_16	1507.HMPREF0262_00298	57.4	0.000000000283	N/A	N/A
structural_annotation	UHGV-0035508_16	PF10723,NF010256,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0035508_17	phrog_15863	162.2	0	N/A	unknown function
UniRef90	UHGV-0035508_17	UniRef90_A0A1Y3R3M0	239.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0035508_17	693746.OBV_01780	177.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0035508_17	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0035508_19	PF17917	N/A	N/A	N/A	N/A
Pfam	UHGV-0035508_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0035508_21	phrog_1770	53.6	0.0000000000000046	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0035508_21	536233.CLO_1822	145.0	4.70976e-42	N/A	N/A
structural_annotation	UHGV-0035508_21	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0035508_23	phrog_22543	40.0	0.000000000056	N/A	unknown function
UniRef90	UHGV-0035508_23	UniRef90_A0A8D9PDK2	50.4	0.00000684	Zinc-ribbon containing domain	N/A
PHROG	UHGV-0035508_24	phrog_22543	48.3	0.00000000000019	N/A	unknown function
UniRef90	UHGV-0035508_24	UniRef90_A0A8D9PDK2	55.5	0.0000000638	Zinc-ribbon containing domain	N/A
structural_annotation	UHGV-0035508_25	PF12092	N/A	N/A	N/A	N/A
PHROG	UHGV-0035508_30	phrog_38832	96.7	6e-29	N/A	unknown function
eggNOG-mapper	UHGV-0035508_30	665956.HMPREF1032_03087	97.1	1.49e-23	N/A	N/A
PHROG	UHGV-0035508_31	phrog_4019	69.1	4.9e-20	N/A	unknown function
KOfam	UHGV-0035508_33	K00390	98.7	6.1e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0035508_33	phrog_424	117.2	1.2e-34	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0035508_33	UniRef90_A0A3D3Y454	421.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-0035508_33	1408437.JNJN01000032_gene2312	343.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0035508_33	BrxP_00001	63.5	3.4e-19	BrxP	BREX
Pfam	UHGV-0035508_33	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0035508_33	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0035508_33	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0035508_34	phrog_15768	58.6	2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0035508_34	1121344.JHZO01000003_gene982	67.0	0.000000000183	N/A	N/A
Pfam	UHGV-0035508_34	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0035508_34	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0035508_35	K03111	148.2	7.84727e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0035508_35	phrog_44	150.8	7.00649e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035508_35	UniRef90_A0A3D1LE19	190.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0035508_35	1235797.C816_01960	177.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0035508_35	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0035508_35	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0035508_35	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0035508_35	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0035508_35	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0035508_36	K07455	281.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0035508_36	phrog_148	266.6	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035508_36	UniRef90_A0A1Y4W4R3	389.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0035508_36	428125.CLOLEP_01822	348.0	0	RecT family	N/A
Pfam	UHGV-0035508_36	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0035508_36	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0035508_36	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0035508_36	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0035508_37	phrog_434	322.3	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035508_37	UniRef90_A0A1Y4W4B5	420.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0035508_37	428125.CLOLEP_01823	329.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0035508_37	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0035508_37	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0035508_37	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0035508_37	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035508_38	PF09943	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035508_40	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0035508_41	phrog_8	43.9	0.0000000000049	transcriptional regulator	transcription regulation
UniRef90	UHGV-0035508_41	UniRef90_R5HIC1	81.3	1.13e-16	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0035508_41	1378168.N510_01712	73.2	0.0000000000000373	N/A	N/A
Pfam	UHGV-0035508_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0035508_41	PF08667,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0035508_42	1408323.JQKK01000014_gene78	91.7	2.2e-19	DNA/RNA non-specific endonuclease	N/A
Pfam	UHGV-0035508_42	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-0035508_42	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-0035508_42	PF02805	N/A	N/A	N/A	N/A
UniRef90	UHGV-0035508_43	UniRef90_A0A3D3Y4M8	61.6	0.0000000137	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0035508_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0035508_43	PF13560,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0035508_44	K14059	124.5	1.4e-36	int; integrase	N/A
PHROG	UHGV-0035508_44	phrog_1	144.2	1.10002e-42	integrase	integration and excision
UniRef90	UHGV-0035508_44	UniRef90_A0A2Z4QB94	314.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0035508_44	641112.ACOK01000111_gene1860	117.0	2.19e-27	Phage integrase family	N/A
Pfam	UHGV-0035508_44	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0035508_44	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0035508_44	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0035508_45	UniRef90_A0A8F0WD75	73.9	0.000000000000255	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0035508_45	1378168.N510_03079	62.4	0.00000000204	N/A	N/A
UniRef90	UHGV-0035508_48	UniRef90_A0A1C6JAI6	66.2	0.00000000000144	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-0035508_48	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0035508_49	K01447	126.1	4e-37	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0035508_49	phrog_9611	134.9	5.8e-40	endolysin	lysis
UniRef90	UHGV-0035508_49	UniRef90_A0A1V5KCB7	247.0	0	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
eggNOG-mapper	UHGV-0035508_49	1235802.C823_05611	168.0	0	Ami_2	N/A
Pfam	UHGV-0035508_49	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0035508_49	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0035508_49	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0035508_50	phrog_13256	61.7	7.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0035508_50	1226322.HMPREF1545_00166	74.7	9.96e-17	N/A	N/A
UniRef90	UHGV-0035508_52	UniRef90_A0A1Y4UW55	122.0	1.87e-34	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0035508_52	742765.HMPREF9457_03364	94.4	3.98e-24	N/A	N/A
PHROG	UHGV-0035508_56	phrog_29409	42.0	0.0000000000099	N/A	unknown function
PHROG	UHGV-0035508_57	phrog_37900	228.7	0	N/A	unknown function
UniRef90	UHGV-0035508_57	UniRef90_A0A3D1L9V5	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-0035508_57	552398.HMPREF0866_03098	178.0	0	N/A	N/A
Pfam	UHGV-0035508_57	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0035508_57	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0035508_57	PF19789	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0035508	Yes	39,206	51	100	1