vOTU vOTU-044517

vOTU: vOTU-044517

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044517
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900549395
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01060 → vGENUS-01682 → vSUBGEN-19688 → vOTU-044517
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0036209
Biosample ID	SAMEA4969162
Genome length (bp)	43,566 bps
CheckV completeness	100.00% (Complete)
CDS count	62
CDS density	96.22%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	9	Host agreement	88.89
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900549395	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0036209_1	phrog_2649	56.7	6.4e-16	endolysin	lysis
UniRef90	UHGV-0036209_1	UniRef90_A0A2Z5JAL7	62.8	0.000000000175	Peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0036209_1	1196322.A370_00987	68.6	0.00000000000373	Hint (Hedgehog/Intein) domain N-terminal region	N/A
Pfam	UHGV-0036209_1	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0036209_1	COG1372	N/A	N/A	Intein/homing endonuclease	N/A
KOfam	UHGV-0036209_2	K06909	135.3	5.30001e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0036209_2	phrog_979	129.7	3e-40	terminase large subunit	head and packaging
UniRef90	UHGV-0036209_2	UniRef90_A0A3C0NMI6	599.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0036209_2	1410650.JHWL01000003_gene2834	554.0	0	N/A	N/A
Pfam	UHGV-0036209_2	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0036209_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0036209_2	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036209_5	689781.AUJX01000009_gene401	62.0	0.000000000514	N/A	N/A
Pfam	UHGV-0036209_5	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0036209_5	PF13384,NF040595	N/A	N/A	N/A	N/A
KOfam	UHGV-0036209_6	K22300	68.8	1.1e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0036209_6	phrog_1373	55.9	8.4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0036209_6	UniRef90_A0A2V2FT63	61.2	0.0000000000722	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0036209_6	502558.EGYY_14630	52.0	0.000000592	sequence-specific DNA binding	N/A
Pfam	UHGV-0036209_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0036209_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-0036209_8	phrog_372	225.8	0	tail protein	tail
UniRef90	UHGV-0036209_8	UniRef90_A0A3E3E6C0	170.0	4.6397e-42	Pilus assembly protein	N/A
eggNOG-mapper	UHGV-0036209_8	1235799.C818_01005	137.0	2.51e-31	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0036209_8	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0036209_8	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0036209_8	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
KOfam	UHGV-0036209_9	K07473	94.6	1.4e-27	dinJ; DNA-damage-inducible protein J	N/A
PHROG	UHGV-0036209_9	phrog_2737	65.0	8.6e-19	N/A	unknown function
UniRef90	UHGV-0036209_9	UniRef90_A0A3D2A8W7	102.0	1.1e-26	Type II toxin-antitoxin system antitoxin, RelB/DinJ family	N/A
eggNOG-mapper	UHGV-0036209_9	476272.RUMHYD_01669	101.0	7.47e-27	RelB antitoxin	N/A
Pfam	UHGV-0036209_9	PF04221	N/A	N/A	RelB antitoxin	RelB
NCBIFam	UHGV-0036209_9	TIGR02384.1	N/A	N/A	type II toxin-antitoxin system RelB/DinJ family antitoxin	N/A
COG	UHGV-0036209_9	COG3077	N/A	N/A	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-0036209_9	PF04221,TIGR02384,COG3077	N/A	N/A	N/A	N/A
KOfam	UHGV-0036209_10	K19157	138.2	4.99997e-41	yafQ; mRNA interferase YafQ [EC:3.1.-.-]	N/A
PHROG	UHGV-0036209_10	phrog_7251	118.5	2.1e-35	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0036209_10	UniRef90_A0A133ZK55	140.0	1.04004e-41	Addiction module toxin, RelE/StbE family	N/A
eggNOG-mapper	UHGV-0036209_10	476272.RUMHYD_01668	142.0	2.11596e-43	Bacterial toxin of type II toxin-antitoxin system, YafQ	N/A
Pfam	UHGV-0036209_10	PF15738	N/A	N/A	Bacterial toxin of type II toxin-antitoxin system, YafQ	YafQ_toxin
NCBIFam	UHGV-0036209_10	TIGR02385.1	N/A	N/A	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	N/A
COG	UHGV-0036209_10	COG3041	N/A	N/A	mRNA-degrading endonuclease YafQ (mRNA interferase), toxin component of the YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-0036209_10	PF15738,TIGR00053,COG3041	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036209_11	NF038340	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_12	phrog_511	211.0	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0036209_12	1410650.JHWL01000003_gene2827	305.0	0	N/A	N/A
structural_annotation	UHGV-0036209_12	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_13	phrog_12105	127.8	4.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-0036209_13	1519439.JPJG01000060_gene1891	81.3	4.52e-18	N/A	N/A
PHROG	UHGV-0036209_15	phrog_1357	203.5	0	major head protein	head and packaging
UniRef90	UHGV-0036209_15	UniRef90_A0A2V2CFL5	558.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0036209_15	1410650.JHWL01000003_gene2830	263.0	0	N/A	N/A
NCBIFam	UHGV-0036209_15	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0036209_15	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_16	phrog_13908	169.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0036209_16	1410650.JHWL01000003_gene2831	94.4	2.88e-19	N/A	N/A
KOfam	UHGV-0036209_18	K07584	49.0	0.00000000000012	N/A	N/A
PHROG	UHGV-0036209_18	phrog_4478	53.1	0.0000000000000034	peptidase	other
UniRef90	UHGV-0036209_18	UniRef90_A0A7Y3P0U9	54.3	0.00000033	Ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-0036209_18	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0036209_18	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036209_18	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_19	phrog_156	306.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0036209_19	1410650.JHWL01000003_gene2833	517.0	0	N/A	N/A
structural_annotation	UHGV-0036209_19	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036209_21	445972.ANACOL_01862	56.6	0.00000000603	Phage antirepressor protein KilAC domain	N/A
COG	UHGV-0036209_21	COG3617	N/A	N/A	Prophage antirepressor	N/A
PHROG	UHGV-0036209_23	phrog_1384	112.7	3.1e-33	Mom-like DNA modification protein	other
UniRef90	UHGV-0036209_23	UniRef90_A0A516MDE6	164.0	0	Putative adenine modification enzyme	N/A
eggNOG-mapper	UHGV-0036209_23	411490.ANACAC_02385	186.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0036209_23	PF14236,MF_02210,NF007025,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_25	phrog_38832	87.9	8.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0036209_25	665956.HMPREF1032_00143	81.6	3.68e-17	N/A	N/A
structural_annotation	UHGV-0036209_25	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_26	phrog_757	173.9	0	DNA methyltransferase	other
UniRef90	UHGV-0036209_26	UniRef90_A0A3E2U1Y9	267.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0036209_26	748224.HMPREF9436_03069	247.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0036209_26	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0036209_26	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_28	phrog_190	95.2	6.7e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036209_28	UniRef90_UPI001C0F5697	101.0	2.01e-25	N/A	N/A
eggNOG-mapper	UHGV-0036209_28	342113.DM82_1124	95.9	3.28e-23	N/A	N/A
Pfam	UHGV-0036209_28	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0036209_28	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_32	phrog_16304	61.3	1.7e-17	N/A	unknown function
UniRef90	UHGV-0036209_32	UniRef90_UPI001E36D421	106.0	1.03e-24	N/A	N/A
eggNOG-mapper	UHGV-0036209_32	1139219.I569_00067	98.6	8.34e-22	DnaD domain protein	N/A
Pfam	UHGV-0036209_32	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0036209_32	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0036209_32	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0036209_34	K03111	122.7	5e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0036209_34	phrog_44	124.1	1.1e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036209_34	UniRef90_A0A810QFR8	167.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0036209_34	1007096.BAGW01000007_gene1922	160.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0036209_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0036209_34	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0036209_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0036209_34	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0036209_34	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_35	phrog_7370	63.8	2.4e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036209_35	UniRef90_A0A3D1LDS4	109.0	5.42e-29	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0036209_35	445972.ANACOL_01826	97.4	3.44e-25	HNH nucleases	N/A
PHROG	UHGV-0036209_36	phrog_72	55.3	7.8e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036209_36	UniRef90_A0A8D9PDS2	150.0	9.79508e-43	NinB protein	N/A
eggNOG-mapper	UHGV-0036209_36	445972.ANACOL_01825	151.0	3.78351e-44	N/A	N/A
structural_annotation	UHGV-0036209_36	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_37	phrog_7838	132.3	4.1e-39	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036209_37	UniRef90_A0A8D9UGW3	194.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0036209_37	742767.HMPREF9456_02052	165.0	0	N/A	N/A
structural_annotation	UHGV-0036209_37	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
Pfam	UHGV-0036209_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0036209_40	COG1709	N/A	N/A	Predicted transcriptional regulator,contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0036209_42	PF21291,NF041951,COG1513	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_43	phrog_21498	304.7	0	N/A	unknown function
UniRef90	UHGV-0036209_43	UniRef90_C7MM70	231.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-0036209_43	78346.BRUM_0376	231.0	0	DNA binding	N/A
COG	UHGV-0036209_43	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0036209_43	PF05869,TIGR01712	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036209_45	UniRef90_A0A3A9FK22	77.4	5.17e-17	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0036209_45	929506.CbC4_1187	48.1	0.00000232	N/A	N/A
structural_annotation	UHGV-0036209_45	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0036209_46	K23779	49.6	0.000000000000085	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0036209_46	phrog_3	45.6	0.0000000000027	transcriptional repressor	transcription regulation
UniRef90	UHGV-0036209_46	UniRef90_UPI0018AA364F	122.0	1.44e-33	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0036209_46	428125.CLOLEP_00924	87.4	1.83e-20	N/A	N/A
Pfam	UHGV-0036209_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0036209_46	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0036209_46	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_48	phrog_14556	43.3	0.0000000000033	N/A	unknown function
eggNOG-mapper	UHGV-0036209_48	696281.Desru_2490	72.4	0.00000000000199	PFAM nuclease (SNase	N/A
COG	UHGV-0036209_48	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
structural_annotation	UHGV-0036209_49	PF13560,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0036209_50	K14059	145.7	5.60519e-43	int; integrase	N/A
PHROG	UHGV-0036209_50	phrog_1	151.8	5.60519e-45	integrase	integration and excision
UniRef90	UHGV-0036209_50	UniRef90_A0A3D2HVQ9	272.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0036209_50	1423724.BAMM01000034_gene2135	73.6	0.0000000000124	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0036209_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0036209_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0036209_50	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036209_51	1378168.N510_03079	85.9	2.55e-18	N/A	N/A
Pfam	UHGV-0036209_54	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
PHROG	UHGV-0036209_55	phrog_1129	67.7	1.2e-19	holin	lysis
UniRef90	UHGV-0036209_55	UniRef90_A0A316PMB0	117.0	1.29e-32	Enolase	N/A
eggNOG-mapper	UHGV-0036209_55	665956.HMPREF1032_03272	117.0	2.17e-33	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0036209_55	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0036209_55	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_56	phrog_4105	50.6	0.000000000000029	N/A	unknown function
eggNOG-mapper	UHGV-0036209_56	1235790.C805_00613	52.0	0.000000434	N/A	N/A
KOfam	UHGV-0036209_57	K01447	79.8	4.3e-23	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0036209_57	phrog_1794	143.9	1.3004e-42	amidase	lysis
UniRef90	UHGV-0036209_57	UniRef90_UPI00049795D9	183.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0036209_57	411468.CLOSCI_00531	161.0	1.10983e-42	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0036209_57	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0036209_57	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0036209_57	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0036209_57	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-0036209_57	PF01510,PF18342,MF_04111,NF008758,NF040670,COG5632	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0036209_58	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0036209_58	NF040910	N/A	N/A	N/A	N/A
KOfam	UHGV-0036209_60	K19721	48.3	0.000000000000039	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0036209_60	phrog_5073	57.5	2.2e-16	tail fiber protein	tail
Pfam	UHGV-0036209_60	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0036209_60	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0036209_61	phrog_22978	498.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0036209_61	693746.OBV_01590	527.0	0	N/A	N/A
Pfam	UHGV-0036209_61	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
Pfam	UHGV-0036209_61	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
eggNOG-mapper	UHGV-0036209_62	1410650.JHWL01000003_gene2815	116.0	2.27e-26	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0036209	Yes	43,566	63	100	1
UHGV-1880346	No	26,038	64	61	1