vOTU vOTU-044530

vOTU: vOTU-044530

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044530
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-724 → CAG-724 sp003524145
Taxonomy (UHGV)	vFAM-00102 → vSUBFAM-01437 → vGENUS-01644 → vSUBGEN-43273 → vOTU-044530
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-272 → CAG-272 sp000433515
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0036432
Biosample ID	N/A
Genome length (bp)	53,586 bps
CheckV completeness	100.00% (Complete)
CDS count	75
CDS density	94.46%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-272 → CAG-272 sp000433515	Total connections	82	Host agreement	95.12
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-724 → CAG-724 sp003524145	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0036432_1	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036432_2	1408437.JNJN01000043_gene802	110.0	1.76e-29	N/A	N/A
eggNOG-mapper	UHGV-0036432_3	476272.RUMHYD_01954	75.9	0.000000000000063	N/A	N/A
eggNOG-mapper	UHGV-0036432_4	658655.HMPREF0988_00918	47.0	0.00000647	N/A	N/A
Pfam	UHGV-0036432_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0036432_6	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
KOfam	UHGV-0036432_8	K07474	42.3	0.000000000015	xtmA; phage terminase small subunit	N/A
KOfam	UHGV-0036432_9	K06909	121.9	7.1e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0036432_9	phrog_979	140.8	5.10073e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0036432_9	UniRef90_A0A413FUY4	438.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0036432_9	665956.HMPREF1032_03884	376.0	0	Terminase-like family	N/A
Pfam	UHGV-0036432_9	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0036432_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0036432_9	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_12	phrog_156	114.2	1.2e-33	portal protein	head and packaging
eggNOG-mapper	UHGV-0036432_12	588581.Cpap_1526	297.0	0	N/A	N/A
structural_annotation	UHGV-0036432_12	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_14	phrog_14242	99.1	1.7e-29	major head protein	head and packaging
UniRef90	UHGV-0036432_14	UniRef90_A0A3D2CI53	323.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0036432_14	871968.DESME_08900	65.9	0.00000000705	N/A	N/A
NCBIFam	UHGV-0036432_14	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0036432_14	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036432_16	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_17	phrog_511	67.7	1.1e-19	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0036432_17	657322.FPR_02360	71.2	0.00000000029	N/A	N/A
structural_annotation	UHGV-0036432_17	PF11134,MF_00923,NF010237,NF038128,COG5276	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036432_19	552398.HMPREF0866_03195	54.7	0.0000000914	N/A	N/A
COG	UHGV-0036432_21	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
NCBIFam	UHGV-0036432_22	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0036432_22	NF040910	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036432_23	PF20010	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_25	phrog_37604	159.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0036432_25	1232443.BAIA02000078_gene10	121.0	4.96e-33	N/A	N/A
PHROG	UHGV-0036432_26	phrog_1129	68.3	8e-20	holin	lysis
UniRef90	UHGV-0036432_26	UniRef90_A0A416MDZ9	140.0	9.71941e-42	Enolase	N/A
eggNOG-mapper	UHGV-0036432_26	742740.HMPREF9474_03522	124.0	7.6e-36	N/A	N/A
Pfam	UHGV-0036432_26	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0036432_26	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0036432_27	K01447	55.8	9.9e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0036432_27	phrog_15001	128.9	4.3e-38	endolysin	lysis
UniRef90	UHGV-0036432_27	UniRef90_R6U0F7	259.0	0	Putative lipoprotein	N/A
eggNOG-mapper	UHGV-0036432_27	552398.HMPREF0866_01156	162.0	0	Ami_2	N/A
Pfam	UHGV-0036432_27	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0036432_27	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
PHROG	UHGV-0036432_29	phrog_22978	407.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0036432_29	1410650.JHWL01000003_gene2814	196.0	0	N/A	N/A
Pfam	UHGV-0036432_29	PF00583	N/A	N/A	Acetyltransferase (GNAT) family	Acetyltransf_1
Pfam	UHGV-0036432_29	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-0036432_29	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
structural_annotation	UHGV-0036432_30	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_31	phrog_36	48.5	0.00000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0036432_31	UniRef90_A0A7X9GB27	73.6	0.00000000000000672	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0036432_31	1540257.JQMW01000004_gene433	61.6	0.0000000000811	N/A	N/A
KOfam	UHGV-0036432_33	K03091	80.3	3.8e-23	sigH; RNA polymerase sporulation-specific sigma factor	N/A
PHROG	UHGV-0036432_33	phrog_351	43.1	8.3e-21	RNA polymerase sigma factor	transcription regulation
eggNOG-mapper	UHGV-0036432_33	908338.HMPREF9286_1675	54.3	0.00000197	Belongs to the sigma-70 factor family	N/A
Pfam	UHGV-0036432_33	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
Pfam	UHGV-0036432_33	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
NCBIFam	UHGV-0036432_33	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0036432_33	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0036432_33	PF04542,PF08281,MF_00962,NF006158,COG1191	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036432_36	318464.IO99_07375	74.3	5.64e-16	N/A	N/A
PHROG	UHGV-0036432_37	phrog_22543	41.5	0.000000000016	N/A	unknown function
COG	UHGV-0036432_38	COG1327	N/A	N/A	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	N/A
structural_annotation	UHGV-0036432_38	PF04606,NF007241	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_40	phrog_2245	89.5	3.8e-26	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0036432_40	UniRef90_A0A4U9RLZ8	66.6	0.00000000000196	N/A	N/A
eggNOG-mapper	UHGV-0036432_40	706433.HMPREF9430_01279	73.9	5.36e-16	N/A	N/A
structural_annotation	UHGV-0036432_40	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_48	phrog_478	119.2	1.8e-35	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0036432_48	UniRef90_A0A373Q857	167.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0036432_48	1111121.HMPREF1247_0834	87.0	3.4e-20	N/A	N/A
PHROG	UHGV-0036432_50	phrog_190	109.2	3.7e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036432_50	UniRef90_A0A4P8JTL4	129.0	1.68e-36	N/A	N/A
eggNOG-mapper	UHGV-0036432_50	742767.HMPREF9456_03412	92.8	4.55e-23	N/A	N/A
Pfam	UHGV-0036432_50	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0036432_50	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-0036432_52	K17680	335.9	0	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-0036432_52	phrog_239	289.0	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036432_52	UniRef90_A0A413G4P8	555.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0036432_52	247490.KSU1_C0210	331.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0036432_52	PF13155	N/A	N/A	Toprim-like	Toprim_2
Pfam	UHGV-0036432_52	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0036432_52	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0036432_52	PF03796,PF19898,MF_04154,TIGR03877,TIGR01391,COG0467,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_54	phrog_5968	155.3	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036432_54	UniRef90_A0A4S2A9L5	168.0	0	Replisome organizer	N/A
eggNOG-mapper	UHGV-0036432_54	1235802.C823_06033	164.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-0036432_54	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0036432_54	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0036432_54	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
KOfam	UHGV-0036432_55	K03111	132.3	5.8e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0036432_55	phrog_44	144.7	5.19882e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036432_55	UniRef90_R6TSJ9	170.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0036432_55	445972.ANACOL_04434	119.0	3.67e-32	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0036432_55	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0036432_55	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0036432_55	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0036432_55	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0036432_55	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_56	phrog_4973	52.7	0.0000000000000074	N/A	unknown function
Pfam	UHGV-0036432_56	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0036432_56	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036432_58	UniRef90_A0A098GES5	111.0	6.5e-30	Putative phage associated protein	N/A
structural_annotation	UHGV-0036432_58	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_59	phrog_7566	99.9	1.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0036432_59	1118057.CAGX01000020_gene1648	48.9	0.00000357	N/A	N/A
PHROG	UHGV-0036432_60	phrog_72	65.8	6.7e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036432_60	UniRef90_A0A8D9PDS2	155.0	7.00649e-45	NinB protein	N/A
eggNOG-mapper	UHGV-0036432_60	445972.ANACOL_01825	127.0	5.85e-35	N/A	N/A
structural_annotation	UHGV-0036432_60	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_61	phrog_659	203.4	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036432_61	UniRef90_UPI001E5A6693	259.0	0	N/A	N/A
eggNOG-mapper	UHGV-0036432_61	1507.HMPREF0262_00431	231.0	0	N/A	N/A
Pfam	UHGV-0036432_61	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0036432_61	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0036432_62	phrog_253	107.5	1.1e-31	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036432_62	UniRef90_UPI001898EED4	100.0	1.2e-23	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0036432_62	1226322.HMPREF1545_04074	101.0	7.16e-25	Siphovirus Gp157	N/A
Pfam	UHGV-0036432_62	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0036432_62	PF05565	N/A	N/A	N/A	N/A
Pfam	UHGV-0036432_66	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
UniRef90	UHGV-0036432_68	UniRef90_G4KPX6	63.2	0.000000000533	Putative Xre family DNA-binding protein	N/A
eggNOG-mapper	UHGV-0036432_68	1378168.N510_01712	68.6	0.00000000000904	N/A	N/A
Pfam	UHGV-0036432_68	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
UniRef90	UHGV-0036432_74	UniRef90_A0A1Q6SAI0	134.0	2.99e-37	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0036432_74	556261.HMPREF0240_01759	53.5	0.00000186	Putative restriction endonuclease	N/A
Pfam	UHGV-0036432_74	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0036432_74	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-0036432_74	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0036432_75	K14059	203.0	0	int; integrase	N/A
PHROG	UHGV-0036432_75	phrog_1	178.6	0	integrase	integration and excision
UniRef90	UHGV-0036432_75	UniRef90_UPI0013EAC0FC	238.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0036432_75	1514668.JOOA01000001_gene242	231.0	0	Phage integrase family	N/A
Pfam	UHGV-0036432_75	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0036432_75	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0036432_75	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0036432	Yes	53,586	52	100	1