vOTU vOTU-044645

vOTU: vOTU-044645

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044645
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00517 → vSUBGEN-39140 → vOTU-044645
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0037982
Biosample ID	SAMEA4969195
Genome length (bp)	38,555 bps
CheckV completeness	100.00% (Complete)
CDS count	61
CDS density	89.12%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	322	Host agreement	70.19
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0037982_1	693746.OBV_18010	130.0	2.06e-36	N/A	N/A
structural_annotation	UHGV-0037982_1	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_4	phrog_599	44.4	0.0000000000034	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0037982_4	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0037982_4	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0037982_4	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_6	phrog_3136	129.7	1.1e-38	N/A	unknown function
UniRef90	UHGV-0037982_6	UniRef90_A0A3D0HBD2	169.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_6	97139.C824_00742	63.9	0.00000000018	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0037982_6	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0037982_6	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_7	phrog_38832	86.9	1.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-0037982_7	665956.HMPREF1032_00143	75.1	0.00000000000000981	N/A	N/A
structural_annotation	UHGV-0037982_7	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_11	phrog_22529	111.5	4.4e-33	N/A	unknown function
UniRef90	UHGV-0037982_11	UniRef90_A0A810Q1V0	290.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_11	1410622.JNKY01000010_gene1282	105.0	2.21e-25	3D domain	N/A
Pfam	UHGV-0037982_11	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0037982_11	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0037982_11	PF06725,NF040670,COG3584	N/A	N/A	N/A	N/A
KOfam	UHGV-0037982_13	K01160	64.5	2.8e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0037982_13	phrog_34	58.5	1.4e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037982_13	UniRef90_UPI0018ABA1B6	157.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0037982_13	561177.ANHYDRO_01396	113.0	9.82e-31	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0037982_13	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0037982_13	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0037982_13	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037982_15	TIGR00122,COG1654	N/A	N/A	N/A	N/A
KOfam	UHGV-0037982_16	K00558	160.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0037982_16	phrog_116	189.0	0	DNA methyltransferase	other
UniRef90	UHGV-0037982_16	UniRef90_U4QYH5	342.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0037982_16	718252.FP2_16350	313.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0037982_16	oMTase_00004	202.3	0	orphan methyltransferase	RM
Pfam	UHGV-0037982_16	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0037982_16	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0037982_16	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0037982_17	phrog_15768	79.1	2.8e-24	N/A	unknown function
UniRef90	UHGV-0037982_17	UniRef90_A0A8D9PDU3	132.0	5.07e-35	N/A	N/A
eggNOG-mapper	UHGV-0037982_17	203119.Cthe_2466	87.0	2.6e-17	N/A	N/A
Pfam	UHGV-0037982_17	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0037982_17	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0037982_18	K03111	114.4	1.6e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0037982_18	phrog_44	116.1	3.1e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037982_18	UniRef90_A0A810PUK9	239.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0037982_18	1203606.HMPREF1526_01880	108.0	1.33e-28	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0037982_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0037982_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0037982_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0037982_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0037982_18	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_19	phrog_72	47.9	0.000000000000032	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037982_19	UniRef90_A0A8D9PDS2	267.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0037982_19	445972.ANACOL_01825	145.0	6.67018e-42	N/A	N/A
structural_annotation	UHGV-0037982_19	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_20	phrog_155	85.5	7.4e-25	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037982_20	UniRef90_A0A1C6J8G0	261.0	0	ERF superfamily	N/A
eggNOG-mapper	UHGV-0037982_20	1268072.PSAB_05935	177.0	0	ERF superfamily	N/A
Pfam	UHGV-0037982_20	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0037982_20	PF04404,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037982_22	PF00412	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037982_25	UniRef90_A0A8D9PDM8	88.2	1.13e-21	Pyocin activator protein	N/A
structural_annotation	UHGV-0037982_25	PF11112,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0037982_26	K22300	45.8	0.0000000000013	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0037982_26	phrog_8	42.8	0.000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0037982_26	UniRef90_A0A810PZI0	127.0	2.58e-37	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_26	697329.Rumal_2813	57.4	0.00000000332	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0037982_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0037982_26	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0037982_27	UniRef90_A0A810Q1T1	120.0	1.27e-32	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0037982_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0037982_27	COG3780	N/A	N/A	DNA endonuclease related to intein-encoded endonucleases	N/A
structural_annotation	UHGV-0037982_27	PF01381,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037982_28	PF03885	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037982_31	UniRef90_A0A810PZB1	347.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0037982_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0037982_31	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0037982_32	K14059	160.1	0	int; integrase	N/A
PHROG	UHGV-0037982_32	phrog_1	163.1	0	integrase	integration and excision
UniRef90	UHGV-0037982_32	UniRef90_A0A810Q0L1	660.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_32	445972.ANACOL_01797	283.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0037982_32	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0037982_32	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0037982_32	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0037982_33	1232443.BAIA02000078_gene6	58.5	0.00000000169	N/A	N/A
PHROG	UHGV-0037982_34	phrog_28802	43.6	0.0000000000000041	N/A	unknown function
structural_annotation	UHGV-0037982_34	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_35	phrog_20016	175.6	0	N/A	unknown function
UniRef90	UHGV-0037982_35	UniRef90_A0A285PT46	191.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0037982_35	397290.C810_05214	156.0	0	N/A	N/A
structural_annotation	UHGV-0037982_35	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_36	phrog_16490	147.8	9.66896e-44	N/A	unknown function
eggNOG-mapper	UHGV-0037982_36	1408437.JNJN01000043_gene803	157.0	5.60519e-45	N/A	N/A
PHROG	UHGV-0037982_37	phrog_22984	75.9	4.4e-22	N/A	unknown function
PHROG	UHGV-0037982_38	phrog_21718	113.3	1.7e-33	N/A	unknown function
eggNOG-mapper	UHGV-0037982_38	397290.C810_05210	67.0	0.00000000000839	N/A	N/A
PHROG	UHGV-0037982_39	phrog_3754	111.5	6.3e-33	N/A	unknown function
eggNOG-mapper	UHGV-0037982_39	1226322.HMPREF1545_00073	167.0	0	N/A	N/A
KOfam	UHGV-0037982_41	K01448	59.8	4.3e-17	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0037982_41	phrog_435	87.1	1.8e-25	endolysin	lysis
UniRef90	UHGV-0037982_41	UniRef90_A0A810PZ73	468.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_41	697281.Mahau_0053	133.0	5.74e-35	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0037982_41	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0037982_41	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-0037982_41	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0037982_41	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0037982_41	PF01520,PF08230,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_42	phrog_1129	70.3	1.8e-20	holin	lysis
UniRef90	UHGV-0037982_42	UniRef90_A0A810PUU2	184.0	0	Holin	N/A
eggNOG-mapper	UHGV-0037982_42	1410668.JNKC01000001_gene1676	96.7	3.74e-25	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0037982_42	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0037982_42	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_43	phrog_1863	69.3	3.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0037982_43	718252.FP2_04900	110.0	1.21e-30	N/A	N/A
PHROG	UHGV-0037982_44	phrog_372	345.2	0	tail protein	tail
UniRef90	UHGV-0037982_44	UniRef90_A0A3E3E6C0	224.0	0	Pilus assembly protein	N/A
eggNOG-mapper	UHGV-0037982_44	1211844.CBLM010000016_gene1479	200.0	0	N/A	N/A
Pfam	UHGV-0037982_44	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0037982_44	PF05895,MF_04116,NF010681,COG3291,COG5608	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_45	phrog_3558	280.6	0	tail protein	tail
UniRef90	UHGV-0037982_45	UniRef90_A0A810Q1Y2	1005.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_45	1235800.C819_02223	199.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0037982_45	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0037982_45	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0037982_45	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_46	phrog_33	42.0	0.000000000014	distal tail protein Dit	tail
UniRef90	UHGV-0037982_46	UniRef90_A0A374UNT1	132.0	7.49e-35	MtfA protein	N/A
eggNOG-mapper	UHGV-0037982_46	877414.ATWA01000019_gene2049	117.0	8.62e-30	N/A	N/A
structural_annotation	UHGV-0037982_46	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_47	phrog_6900	258.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0037982_47	1499683.CCFF01000017_gene2565	298.0	0	tape measure	N/A
COG	UHGV-0037982_47	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037982_47	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_48	phrog_7115	108.7	3.7e-32	N/A	unknown function
UniRef90	UHGV-0037982_48	UniRef90_A0A810PSE6	250.0	0	bPH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_48	1514668.JOOA01000002_gene2950	193.0	0	Bacterial PH domain	N/A
Pfam	UHGV-0037982_48	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-0037982_48	PF08000,MF_00437	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_50	phrog_885	88.3	7.5e-26	major tail protein	tail
UniRef90	UHGV-0037982_50	UniRef90_A0A843J9F0	209.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_50	1504822.CCNO01000012_gene492	242.0	0	N/A	N/A
structural_annotation	UHGV-0037982_50	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_51	phrog_17405	43.1	0.0000000000066	head protein	head and packaging
structural_annotation	UHGV-0037982_51	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_52	phrog_17977	81.2	8.3e-24	N/A	unknown function
UniRef90	UHGV-0037982_52	UniRef90_UPI00141211AB	94.4	1.18e-22	head-tail adaptor protein	N/A
structural_annotation	UHGV-0037982_52	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_54	phrog_544	116.5	2.5e-34	major head protein	head and packaging
UniRef90	UHGV-0037982_54	UniRef90_A0A1C6B5R0	349.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_54	476272.RUMHYD_01776	315.0	0	N/A	N/A
structural_annotation	UHGV-0037982_54	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037982_55	UniRef90_A0A6B9SU02	92.0	1.25e-19	Fibronectin autolysin	N/A
structural_annotation	UHGV-0037982_55	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_56	phrog_5	68.6	1.3e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-0037982_56	UniRef90_A0A4D7AJK9	189.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0037982_56	1123309.AQYB01000018_gene814	103.0	1.83e-26	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0037982_56	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0037982_56	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_57	phrog_115	115.6	2.5e-34	minor head protein	head and packaging
UniRef90	UHGV-0037982_57	UniRef90_A0A810PSD3	606.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_57	1111121.HMPREF1247_0797	188.0	0	cell adhesion	N/A
Pfam	UHGV-0037982_57	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0037982_57	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0037982_57	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037982_57	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_58	phrog_64	165.7	0	portal protein	head and packaging
UniRef90	UHGV-0037982_58	UniRef90_UPI0018A8A301	600.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0037982_58	1235800.C819_02239	88.2	7.02e-16	phage portal protein, SPP1	N/A
Pfam	UHGV-0037982_58	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0037982_58	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0037982_59	phrog_38	161.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0037982_59	UniRef90_UPI00166CA12B	446.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0037982_59	1140001.I571_01829	450.0	0	N/A	N/A
structural_annotation	UHGV-0037982_59	PF17289,PF05876,MF_04147,NF033889,COG5323	N/A	N/A	N/A	N/A
KOfam	UHGV-0037982_61	K07319	122.3	4.8e-36	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0037982_61	phrog_498	440.7	0	DNA methyltransferase	other
UniRef90	UHGV-0037982_61	UniRef90_A0A810Q3Z7	448.0	0	N6_N4_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-0037982_61	1423758.BN55_01455	418.0	0	DNA methylase	N/A
PADLOC	UHGV-0037982_61	MTase_II_00015	238.6	0	Type II methyltransferase	RM
Pfam	UHGV-0037982_61	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0037982_61	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0037982_61	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0037982_61	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0037982	Yes	38,555	53	100	1