vOTU vOTU-044673

vOTU: vOTU-044673

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044673
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00579 → vGENUS-02755 → vSUBGEN-37003 → vOTU-044673
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0038344
Biosample ID	N/A
Genome length (bp)	42,799 bps
CheckV completeness	100.00% (Complete)
CDS count	75
CDS density	90.23%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	61	Host agreement	73.77
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0038344_1	K19613	50.8	0.00000000000001	SHOC2, SUR8; leucine-rich repeat protein SHOC2	N/A
eggNOG-mapper	UHGV-0038344_1	563031.HMPREF0666_01114	81.6	0.00000000000000158	N/A	N/A
Pfam	UHGV-0038344_1	PF12799	N/A	N/A	Leucine Rich repeats (2 copies)	LRR_4
PHROG	UHGV-0038344_3	phrog_4973	77.3	1.6e-22	N/A	unknown function
UniRef90	UHGV-0038344_3	UniRef90_UPI001D0904CC	96.7	9.24e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0038344_3	880073.Calab_0752	56.6	0.000000000898	Helix-turn-helix domain	N/A
Pfam	UHGV-0038344_3	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0038344_3	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
COG	UHGV-0038344_4	COG0194	N/A	N/A	Guanylate kinase	N/A
PHROG	UHGV-0038344_6	phrog_374	200.3	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038344_6	UniRef90_A0A380IPI2	164.0	0	AP2 domain protein	N/A
eggNOG-mapper	UHGV-0038344_6	511437.Lbuc_1541	157.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0038344_6	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-0038344_7	phrog_14970	207.3	0	N/A	unknown function
UniRef90	UHGV-0038344_7	UniRef90_A0A1C5NV07	161.0	2.8026e-45	DNA damage response protein A	N/A
eggNOG-mapper	UHGV-0038344_7	397291.C804_03856	157.0	1.4013e-44	double-strand break repair protein	N/A
Pfam	UHGV-0038344_7	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0038344_7	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0038344_7	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0038344_8	phrog_72	62.0	1e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038344_8	UniRef90_UPI001F3F3E5C	165.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0038344_8	445972.ANACOL_01825	122.0	1.08e-32	N/A	N/A
structural_annotation	UHGV-0038344_8	PF05772,NF007281	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038344_9	UniRef90_A0A3D1LDS4	119.0	2.69e-33	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0038344_9	445972.ANACOL_01826	97.8	1.11e-25	HNH nucleases	N/A
Pfam	UHGV-0038344_9	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0038344_10	phrog_997	106.4	2.2e-31	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038344_10	UniRef90_R6MCS9	104.0	1.12e-26	N/A	N/A
eggNOG-mapper	UHGV-0038344_10	1203606.HMPREF1526_01889	140.0	1.07998e-41	replication terminator protein, phage associated	N/A
PHROG	UHGV-0038344_11	phrog_1029	135.3	3.5e-40	N/A	unknown function
UniRef90	UHGV-0038344_11	UniRef90_A0A0U3EGQ0	101.0	2.42e-22	Phage-related protein	N/A
eggNOG-mapper	UHGV-0038344_11	552398.HMPREF0866_01625	125.0	2.77e-32	N/A	N/A
structural_annotation	UHGV-0038344_11	PF10065,COG5532	N/A	N/A	N/A	N/A
KOfam	UHGV-0038344_12	K03111	126.1	4.4e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0038344_12	phrog_44	125.5	4e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038344_12	UniRef90_R6LLA3	165.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0038344_12	693746.OBV_19910	159.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0038344_12	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0038344_12	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0038344_12	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0038344_12	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0038344_12	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038344_13	UniRef90_A0A7C1PUJ6	79.0	0.0000000000000288	N/A	N/A
structural_annotation	UHGV-0038344_13	PF07120,COG3756	N/A	N/A	N/A	N/A
PHROG	UHGV-0038344_14	phrog_757	136.9	9.99995e-41	DNA methyltransferase	other
UniRef90	UHGV-0038344_14	UniRef90_UPI001A9B5584	266.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0038344_14	748224.HMPREF9436_03069	194.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0038344_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0038344_16	phrog_9298	64.4	1.4e-18	radical SAM domain protein	other
UniRef90	UHGV-0038344_16	UniRef90_D4C6F1	318.0	0	Elp3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0038344_16	742817.HMPREF9449_01796	306.0	0	radical SAM domain protein	N/A
COG	UHGV-0038344_16	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0038344_16	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038344_17	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0038344_18	phrog_38832	80.3	2.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0038344_18	665956.HMPREF1032_00143	75.9	0.00000000000000807	N/A	N/A
PHROG	UHGV-0038344_20	phrog_599	47.1	0.00000000000048	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0038344_20	UniRef90_A0A3R6D179	106.0	5.26e-28	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0038344_20	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0038344_20	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0038344_20	TIGR03655	N/A	N/A	N/A	N/A
COG	UHGV-0038344_23	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
PHROG	UHGV-0038344_25	phrog_1770	57.1	3.8e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0038344_25	536233.CLO_1822	144.0	1.29004e-41	N/A	N/A
structural_annotation	UHGV-0038344_25	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
KOfam	UHGV-0038344_27	K03466	178.2	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-0038344_27	phrog_1358	148.1	3.36312e-44	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0038344_27	UniRef90_A0A3D3Y6X7	334.0	0	FtsK domain-containing protein	N/A
eggNOG-mapper	UHGV-0038344_27	1121445.ATUZ01000013_gene1292	144.0	1.17e-36	PFAM cell divisionFtsK SpoIIIE	N/A
PADLOC	UHGV-0038344_27	SspH_00004	75.9	1.9e-22	SspH	SSP
Pfam	UHGV-0038344_27	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-0038344_27	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-0038344_27	PF01580,MF_00350,TIGR03925,COG4128	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038344_30	UniRef90_A0A1Y3R5J8	51.6	0.000000265	RHH_1 domain-containing protein	N/A
structural_annotation	UHGV-0038344_30	PF10723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038344_31	693746.OBV_21870	49.3	0.00000371	N/A	N/A
eggNOG-mapper	UHGV-0038344_32	877421.AUJT01000054_gene66	57.4	0.0000000562	N/A	N/A
Pfam	UHGV-0038344_32	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-0038344_33	phrog_38	190.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0038344_33	UniRef90_UPI000419A6BC	413.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0038344_33	1232453.BAIF02000058_gene1623	419.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0038344_33	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0038344_33	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038344_33	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0038344_34	phrog_1233	75.6	7.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0038344_34	33035.JPJF01000106_gene3130	100.0	5.09e-26	N/A	N/A
PHROG	UHGV-0038344_35	phrog_64	212.2	0	portal protein	head and packaging
UniRef90	UHGV-0038344_35	UniRef90_A0A3D3Y472	792.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0038344_35	1123263.AUKY01000015_gene1609	377.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0038344_35	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0038344_35	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038344_36	UniRef90_A0A3D3Y4T2	279.0	0	Phage_Mu_F domain-containing protein	N/A
Pfam	UHGV-0038344_36	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0038344_36	COG4290	N/A	N/A	Guanyl-specific ribonuclease Sa	N/A
structural_annotation	UHGV-0038344_36	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0038344_39	phrog_544	67.2	1.7e-19	major head protein	head and packaging
eggNOG-mapper	UHGV-0038344_39	428127.EUBDOL_01555	246.0	0	N/A	N/A
structural_annotation	UHGV-0038344_39	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-0038344_40	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0038344_40	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038344_41	1298920.KI911353_gene2656	87.0	3.37e-20	N/A	N/A
eggNOG-mapper	UHGV-0038344_42	476272.RUMHYD_01963	81.3	5.22e-17	N/A	N/A
structural_annotation	UHGV-0038344_43	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038344_44	1298920.KI911353_gene2652	176.0	0	N/A	N/A
structural_annotation	UHGV-0038344_44	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038344_45	UniRef90_UPI001D0975F6	93.6	2.22e-22	N/A	N/A
PHROG	UHGV-0038344_47	phrog_1535	145.1	7.84727e-44	tail length tape measure protein	tail
UniRef90	UHGV-0038344_47	UniRef90_A0A173WM72	229.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0038344_47	1304866.K413DRAFT_3046	238.0	0	N/A	N/A
COG	UHGV-0038344_47	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0038344_48	phrog_1194	80.0	2.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0038344_48	717606.PaecuDRAFT_3133	71.2	0.0000000000000267	N/A	N/A
Pfam	UHGV-0038344_48	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0038344_48	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0038344_49	phrog_32308	71.0	8.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0038344_49	1235797.C816_04180	75.1	0.00000000000186	N/A	N/A
structural_annotation	UHGV-0038344_49	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038344_53	1519439.JPJG01000060_gene1892	75.9	0.0000000000284	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0038344_53	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0038344_54	phrog_937	50.8	0.000000000000029	hemolysin	other
eggNOG-mapper	UHGV-0038344_54	1519439.JPJG01000023_gene533	74.3	0.00000000000000158	N/A	N/A
PHROG	UHGV-0038344_56	phrog_13256	61.6	7.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0038344_56	428125.CLOLEP_01907	74.7	6.39e-17	N/A	N/A
KOfam	UHGV-0038344_57	K01447	120.9	1.4e-35	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0038344_57	phrog_1794	133.5	1.8e-39	amidase	lysis
UniRef90	UHGV-0038344_57	UniRef90_A0A3D4VSU2	182.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0038344_57	411470.RUMGNA_02087	161.0	3.78351e-44	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0038344_57	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0038344_57	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0038344_57	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038344_58	UniRef90_A0A1C6JAI6	65.5	0.0000000000029	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-0038344_58	PF16509,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038344_59	1160721.RBI_I00206	48.9	0.0000005	N/A	N/A
structural_annotation	UHGV-0038344_59	PF10723	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038344_64	UniRef90_A0A7M1RS47	68.2	0.0000000000146	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0038344_64	1378168.N510_03079	62.8	0.00000000133	N/A	N/A
KOfam	UHGV-0038344_65	K14059	209.4	0	int; integrase	N/A
PHROG	UHGV-0038344_65	phrog_1	203.5	0	integrase	integration and excision
UniRef90	UHGV-0038344_65	UniRef90_A0A212JT52	264.0	0	Putative Integrase family protein	N/A
eggNOG-mapper	UHGV-0038344_65	1507.HMPREF0262_00307	175.0	0	Phage integrase family	N/A
Pfam	UHGV-0038344_65	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0038344_65	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0038344_65	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0038344_65	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038344_66	UniRef90_A0A3D3Y4M8	118.0	6.84e-30	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0038344_66	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0038344_66	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0038344_68	K07448	123.7	1.8e-36	mrr; restriction system protein	N/A
PHROG	UHGV-0038344_68	phrog_19856	56.9	3.2e-16	N/A	unknown function
UniRef90	UHGV-0038344_68	UniRef90_A0A3D3Y434	222.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-0038344_68	1211844.CBLM010000078_gene2625	107.0	1.25e-26	Restriction endonuclease	N/A
PADLOC	UHGV-0038344_68	ZorD1_00005	57.0	2.5e-16	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0038344_68	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0038344_68	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
structural_annotation	UHGV-0038344_68	PF04471,MF_00722,NF040854,COG1787	N/A	N/A	N/A	N/A
KOfam	UHGV-0038344_70	K07449	107.1	1.2e-31	K07449; similar to archaeal holliday junction resolvase and Mrr protein	N/A
PHROG	UHGV-0038344_70	phrog_19856	48.3	0.00000000000012	N/A	unknown function
UniRef90	UHGV-0038344_70	UniRef90_W4F540	79.0	0.0000000000000556	Mrr_cat domain-containing protein	N/A
eggNOG-mapper	UHGV-0038344_70	397291.C804_03654	97.1	6.2e-22	Restriction endonuclease	N/A
PADLOC	UHGV-0038344_70	ZorD1_00005	53.5	0.0000000000000024	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0038344_70	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0038344_70	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
PHROG	UHGV-0038344_71	phrog_8	51.7	0.000000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0038344_71	UniRef90_A0A329UR16	62.8	0.000000000333	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0038344_71	1123302.KB904185_gene810	56.2	0.0000000578	Helix-turn-helix domain	N/A
COG	UHGV-0038344_71	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0038344_71	PF01381,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038344_72	UniRef90_UPI001967CDDD	88.2	1.27e-21	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0038344_72	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0038344_72	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038344_74	PF12728,NF040990	N/A	N/A	N/A	N/A
Pfam	UHGV-0038344_75	PF00560	N/A	N/A	Leucine Rich Repeat	LRR_1

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0038344	Yes	42,799	52	100	1
UHGV-0037318	No	37,753	52	85	1