vOTU vOTU-044749

vOTU: vOTU-044749

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044749
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00131 → vSUBGEN-17989 → vOTU-044749
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0039398
Biosample ID	SAMEA4969133
Genome length (bp)	40,483 bps
CheckV completeness	100.00% (Complete)
CDS count	67
CDS density	93.14%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	428	Host agreement	98.83
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0039398_1	1408437.JNJN01000043_gene801	97.8	1.62e-22	N/A	N/A
eggNOG-mapper	UHGV-0039398_2	1408437.JNJN01000043_gene802	122.0	1.58e-34	N/A	N/A
PHROG	UHGV-0039398_3	phrog_16490	103.2	2.8e-40	N/A	unknown function
eggNOG-mapper	UHGV-0039398_3	1408437.JNJN01000043_gene803	160.0	1.4013e-45	N/A	N/A
AcrCatalog	UHGV-0039398_7	cluster_11486	80.9	2.73e-22	NA	N/A
PHROG	UHGV-0039398_8	phrog_374	56.5	6.7e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0039398_8	411467.BACCAP_02633	71.2	0.000000000013	N/A	N/A
UniRef90	UHGV-0039398_9	UniRef90_A0A7X2P872	66.2	0.0000000000324	Ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-0039398_9	1033733.CAEK01000007_gene1628	86.7	6.65e-20	N/A	N/A
Pfam	UHGV-0039398_9	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0039398_9	PF16734,PF01402	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039398_11	PF07870,MF_01506	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_12	phrog_15303	81.6	7.1e-24	N/A	unknown function
KOfam	UHGV-0039398_14	K07273	153.7	1.4013e-45	acm; lysozyme	N/A
PHROG	UHGV-0039398_14	phrog_291	107.6	1.3e-31	endolysin	lysis
UniRef90	UHGV-0039398_14	UniRef90_A0A564U0D3	419.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0039398_14	718252.FP2_04890	250.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0039398_14	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0039398_14	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0039398_14	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
Pfam	UHGV-0039398_15	PF10096	N/A	N/A	N/A	DUF2334
PHROG	UHGV-0039398_17	phrog_1067	173.9	0	minor head protein	head and packaging
UniRef90	UHGV-0039398_17	UniRef90_A0A2A7AM44	709.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0039398_17	1123263.AUKY01000068_gene489	192.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0039398_17	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0039398_17	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0039398_17	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0039398_17	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_18	phrog_33	82.1	1.1e-23	distal tail protein Dit	tail
UniRef90	UHGV-0039398_18	UniRef90_A0A173Z1X4	142.0	3.87e-38	Phage-related protein	N/A
eggNOG-mapper	UHGV-0039398_18	1487921.DP68_11370	91.7	1.33e-19	tail component	N/A
NCBIFam	UHGV-0039398_18	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0039398_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0039398_18	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_19	phrog_9959	87.3	9.8e-26	tail length tape measure protein	tail
UniRef90	UHGV-0039398_19	UniRef90_A0A2A7ALS3	920.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0039398_19	596328.HMPREF0578_1241	161.0	9.3e-38	phage tail tape measure protein	N/A
Pfam	UHGV-0039398_19	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0039398_19	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0039398_19	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0039398_19	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_22	phrog_88	94.0	1.6e-27	major tail protein	tail
UniRef90	UHGV-0039398_22	UniRef90_G9YSC5	110.0	1.14e-26	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0039398_22	33035.JPJF01000039_gene278	75.9	0.0000000000000274	N/A	N/A
NCBIFam	UHGV-0039398_22	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0039398_22	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_23	phrog_5	49.2	0.000000000000091	tail completion or Neck1 protein	connector
UniRef90	UHGV-0039398_23	UniRef90_A0A1C6FG30	131.0	7.31e-36	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0039398_23	908340.HMPREF9406_2573	110.0	1.42e-28	N/A	N/A
structural_annotation	UHGV-0039398_23	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0039398_24	999413.HMPREF1094_02005	70.9	0.0000000000000177	N/A	N/A
structural_annotation	UHGV-0039398_24	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_25	phrog_19734	88.2	8.1e-26	N/A	unknown function
structural_annotation	UHGV-0039398_25	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_26	phrog_749	59.3	6.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0039398_26	1211817.CCAT010000053_gene2133	66.6	0.000000000000698	N/A	N/A
PHROG	UHGV-0039398_27	phrog_10	133.5	1.3e-39	major head protein	head and packaging
UniRef90	UHGV-0039398_27	UniRef90_A0A2A7B712	726.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0039398_27	1235792.C808_00086	451.0	0	Phage capsid family	N/A
Pfam	UHGV-0039398_27	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0039398_27	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0039398_27	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0039398_27	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0039398_27	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0039398_28	K01358	79.8	4.5e-23	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0039398_28	phrog_94	129.1	4.8e-38	head maturation protease	head and packaging
UniRef90	UHGV-0039398_28	UniRef90_UPI001C0ECD60	131.0	1.21e-33	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0039398_28	1232452.BAIB02000007_gene1626	122.0	2.91e-31	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0039398_28	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0039398_28	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0039398_28	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_29	phrog_12	126.2	2.4e-37	portal protein	head and packaging
UniRef90	UHGV-0039398_29	UniRef90_A0A2A7B6S8	553.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0039398_29	349161.Dred_2606	260.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0039398_29	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0039398_29	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0039398_29	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0039398_29	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_30	phrog_9	241.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0039398_30	UniRef90_A0A2A7ALT4	1061.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0039398_30	610130.Closa_0741	634.0	0	Phage Terminase	N/A
Pfam	UHGV-0039398_30	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0039398_30	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0039398_30	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_31	phrog_13845	56.5	3.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0039398_31	1399942.U3PDR2_9CAUD	67.0	0.00000000000113	N/A	N/A
structural_annotation	UHGV-0039398_31	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_32	phrog_119	58.5	9.6e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039398_32	UniRef90_A0A2A7B6I3	231.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0039398_32	610130.Closa_0739	109.0	2.21e-29	HNH nucleases	N/A
Pfam	UHGV-0039398_32	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0039398_32	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0039398_33	K00571	182.0	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0039398_33	phrog_67	187.8	0	DNA methyltransferase	other
UniRef90	UHGV-0039398_33	UniRef90_A0A1V5NVC0	253.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0039398_33	1474867.A0A076FIB3_9PHYC	242.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-0039398_33	MTase_II_00037	157.3	0	Type II methyltransferase	RM
Pfam	UHGV-0039398_33	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-0039398_33	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039398_38	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0039398_39	K03497	95.2	1.2e-27	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0039398_39	phrog_4715	118.3	4.9e-35	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039398_39	UniRef90_A0A2A7AMC5	288.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0039398_39	411471.SUBVAR_05842	179.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0039398_39	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0039398_39	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0039398_39	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0039398_40	K03496	206.3	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0039398_40	phrog_164	153.2	1.4013e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039398_40	UniRef90_A0A2A7B6H3	353.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0039398_40	411471.SUBVAR_05839	231.0	0	AAA domain	N/A
Pfam	UHGV-0039398_40	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0039398_40	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0039398_40	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0039398_42	748224.HMPREF9436_00735	156.0	2.9147e-43	N/A	N/A
Pfam	UHGV-0039398_42	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-0039398_42	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0039398_42	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0039398_43	K03111	140.6	1.6e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0039398_43	phrog_44	148.6	3.08286e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039398_43	UniRef90_A0A2A7ALU9	199.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0039398_43	748224.HMPREF9436_00638	206.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0039398_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0039398_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0039398_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0039398_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0039398_43	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_44	phrog_7566	86.4	2.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0039398_44	411471.SUBVAR_05830	106.0	1.59e-28	N/A	N/A
PHROG	UHGV-0039398_46	phrog_72	45.4	0.0000000000014	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0039398_46	411471.SUBVAR_05829	136.0	2.94e-38	N/A	N/A
structural_annotation	UHGV-0039398_46	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_47	phrog_14970	48.1	0.00000000000022	N/A	unknown function
COG	UHGV-0039398_47	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0039398_47	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039398_50	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039398_57	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039398_58	UniRef90_A0A2A7AM72	156.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0039398_58	1378168.N510_01712	76.3	0.00000000000000266	N/A	N/A
structural_annotation	UHGV-0039398_58	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039398_59	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0039398_66	phrog_1373	41.3	0.0000000000095	transcriptional regulator	transcription regulation
UniRef90	UHGV-0039398_66	UniRef90_A0A2A7AM70	191.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0039398_66	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0039398_66	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0039398_66	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0039398_67	K14059	183.1	0	int; integrase	N/A
PHROG	UHGV-0039398_67	phrog_1	166.1	0	integrase	integration and excision
UniRef90	UHGV-0039398_67	UniRef90_A0A367GI93	219.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0039398_67	1507.HMPREF0262_00307	162.0	9.24857e-44	Phage integrase family	N/A
Pfam	UHGV-0039398_67	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0039398_67	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0039398_67	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0039398	Yes	40,483	53	100	1