vOTU vOTU-044912

vOTU: vOTU-044912

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044912
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00146 → vGENUS-00810 → vSUBGEN-37998 → vOTU-044912
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Bariatricus → Bariatricus comes
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0044434
Biosample ID	SAMEA2042504
Genome length (bp)	33,517 bps
CheckV completeness	100.00% (Complete)
CDS count	50
CDS density	90.73%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Bariatricus → Bariatricus comes	Total connections	140	Host agreement	72.14
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0044434_2	phrog_3584	148.0	5.1848e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0044434_2	33035.JPJF01000138_gene3005	359.0	0	N/A	N/A
structural_annotation	UHGV-0044434_2	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_3	phrog_3777	82.0	4.6e-24	N/A	unknown function
UniRef90	UHGV-0044434_3	UniRef90_A0A3E4GMR6	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-0044434_3	411460.RUMTOR_02064	120.0	1.04e-33	N/A	N/A
Pfam	UHGV-0044434_3	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-0044434_3	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_7	phrog_15968	67.5	1.7e-19	anti-repressor	transcription regulation
UniRef90	UHGV-0044434_7	UniRef90_UPI00194F0FEF	80.5	5.17e-19	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0044434_7	658655.HMPREF0988_02592	90.1	1.11e-21	AntA/AntB antirepressor	N/A
Pfam	UHGV-0044434_7	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0044434_7	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0044434_7	PF03374	N/A	N/A	N/A	N/A
KOfam	UHGV-0044434_8	K06400	232.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0044434_8	phrog_95	277.9	0	integrase	integration and excision
UniRef90	UHGV-0044434_8	UniRef90_A0A1C5N2V2	1003.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0044434_8	665950.HMPREF1025_02566	614.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0044434_8	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0044434_8	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0044434_8	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0044434_8	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0044434_8	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0044434_9	K07273	191.5	0	acm; lysozyme	N/A
PHROG	UHGV-0044434_9	phrog_291	202.7	0	endolysin	lysis
UniRef90	UHGV-0044434_9	UniRef90_UPI00156E082A	622.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0044434_9	521003.COLINT_02363	312.0	0	CW_7 repeat	N/A
Pfam	UHGV-0044434_9	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0044434_9	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-0044434_9	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0044434_9	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0044434_9	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_10	phrog_1129	85.0	5.1e-25	holin	lysis
UniRef90	UHGV-0044434_10	UniRef90_A0A893W7Y5	180.0	0	Phage holin family protein	N/A
eggNOG-mapper	UHGV-0044434_10	742733.HMPREF9469_05010	135.0	2.82e-40	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0044434_10	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0044434_10	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_11	phrog_4105	83.0	1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0044434_11	411459.RUMOBE_00911	137.0	1.44999e-40	N/A	N/A
NCBIFam	UHGV-0044434_12	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
structural_annotation	UHGV-0044434_12	PF20124	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_15	phrog_16164	119.1	2.5e-36	N/A	unknown function
structural_annotation	UHGV-0044434_15	PF10651,NF032891	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_16	phrog_20274	151.9	2.8026e-45	N/A	unknown function
UniRef90	UHGV-0044434_16	UniRef90_A0A173TUK0	261.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-0044434_16	1235799.C818_04238	183.0	0	Putative ABC-transporter type IV	N/A
Pfam	UHGV-0044434_16	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-0044434_16	COG4905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0044434_16	PF06541,COG4905	N/A	N/A	N/A	N/A
UniRef90	UHGV-0044434_17	UniRef90_A0A417WCN8	148.0	1.44e-40	Acyl carrier protein	N/A
eggNOG-mapper	UHGV-0044434_17	1235799.C818_04237	306.0	0	N/A	N/A
structural_annotation	UHGV-0044434_17	PF14301	N/A	N/A	N/A	N/A
KOfam	UHGV-0044434_19	K03733	209.0	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-0044434_19	phrog_1	166.5	0	integrase	integration and excision
UniRef90	UHGV-0044434_19	UniRef90_A0A174ILR0	621.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0044434_19	411468.CLOSCI_02414	486.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0044434_19	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0044434_19	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0044434_19	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0044434_19	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
COG	UHGV-0044434_21	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0044434_22	phrog_14030	160.9	0	N/A	unknown function
UniRef90	UHGV-0044434_22	UniRef90_UPI0018999D57	557.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0044434_22	33035.JPJF01000093_gene2240	342.0	0	NlpC/P60 family	N/A
Pfam	UHGV-0044434_22	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0044434_22	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0044434_22	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0044434_22	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_23	phrog_13289	413.6	0	tail protein	tail
UniRef90	UHGV-0044434_23	UniRef90_UPI001570BE36	1120.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0044434_23	1235798.C817_02568	469.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0044434_23	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0044434_23	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0044434_23	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-0044434_23	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_24	phrog_33	59.4	9.4e-17	distal tail protein Dit	tail
UniRef90	UHGV-0044434_24	UniRef90_UPI001570C170	402.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0044434_24	1235798.C817_02569	199.0	0	tail component	N/A
COG	UHGV-0044434_24	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0044434_24	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_25	phrog_1272	213.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0044434_25	UniRef90_UPI0006C3C180	957.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0044434_25	1035184.HMPREF1042_1328	338.0	0	Phage tail tape measure protein	N/A
Pfam	UHGV-0044434_25	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0044434_25	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0044434_25	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0044434_28	phrog_88	96.7	2.6e-28	major tail protein	tail
UniRef90	UHGV-0044434_28	UniRef90_UPI0006C1EB28	331.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0044434_28	1033737.CAEV01000029_gene288	58.9	0.0000000367	N/A	N/A
Pfam	UHGV-0044434_28	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0044434_28	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0044434_28	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_29	phrog_5	55.3	0.0000000000000019	tail completion or Neck1 protein	connector
UniRef90	UHGV-0044434_29	UniRef90_D4M595	188.0	0	Phage protein, HK97 gp10 family	N/A
structural_annotation	UHGV-0044434_29	TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0044434_30	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0044434_31	UniRef90_UPI00189B1559	234.0	0	phage head closure protein	N/A
NCBIFam	UHGV-0044434_31	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0044434_31	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_33	phrog_10	78.7	4e-23	major head protein	head and packaging
UniRef90	UHGV-0044434_33	UniRef90_UPI00156F222D	720.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0044434_33	1232452.BAIB02000007_gene1625	470.0	0	Phage capsid family	N/A
Pfam	UHGV-0044434_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0044434_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0044434_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0044434_33	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0044434_34	K01358	161.1	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0044434_34	phrog_94	236.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0044434_34	UniRef90_UPI00156EEE56	480.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0044434_34	1232452.BAIB02000007_gene1626	268.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0044434_34	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0044434_34	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0044434_34	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_35	phrog_12	73.8	1.6e-21	portal protein	head and packaging
UniRef90	UHGV-0044434_35	UniRef90_UPI00156D5DC9	728.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0044434_35	1232452.BAIB02000007_gene1627	295.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0044434_35	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0044434_35	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0044434_35	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_36	phrog_9	258.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0044434_36	UniRef90_D4M588	1097.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0044434_36	1232452.BAIB02000007_gene1629	530.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0044434_36	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0044434_36	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0044434_36	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0044434_36	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_37	phrog_5110	95.3	4e-28	terminase small subunit	head and packaging
UniRef90	UHGV-0044434_37	UniRef90_A0A1C5LZF0	101.0	1.86e-25	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0044434_37	349161.Dred_2608	72.4	0.00000000000000352	N/A	N/A
Pfam	UHGV-0044434_37	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0044434_37	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0044434_38	K07451	44.5	0.0000000000031	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0044434_38	phrog_119	61.3	1.6e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0044434_38	UniRef90_UPI00156F1D4A	185.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0044434_38	1232452.BAIB02000007_gene1631	82.8	2.17e-19	HNH nucleases	N/A
Pfam	UHGV-0044434_38	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0044434_38	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0044434_39	phrog_36	75.0	1.2e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0044434_39	UniRef90_UPI001F14539B	118.0	2.67e-31	N/A	N/A
eggNOG-mapper	UHGV-0044434_39	1235800.C819_02243	107.0	1.28e-27	N/A	N/A
structural_annotation	UHGV-0044434_39	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_40	phrog_6568	61.9	5.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0044434_40	1203606.HMPREF1526_00241	50.4	0.000000554	N/A	N/A
PHROG	UHGV-0044434_41	phrog_599	40.3	0.000000000058	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0044434_41	UniRef90_UPI00189A61B2	211.0	0	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0044434_41	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
PHROG	UHGV-0044434_42	phrog_924	42.7	0.000000000012	N/A	unknown function
UniRef90	UHGV-0044434_42	UniRef90_A0A893WE10	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-0044434_42	411461.DORFOR_01155	100.0	3.19e-26	N/A	N/A
Pfam	UHGV-0044434_42	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0044434_42	PF04448,NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0044434_46	PF17516,NF037951	N/A	N/A	N/A	N/A
UniRef90	UHGV-0044434_47	UniRef90_UPI000E4AEE34	221.0	0	N/A	N/A
eggNOG-mapper	UHGV-0044434_47	411460.RUMTOR_01556	209.0	0	N/A	N/A
Pfam	UHGV-0044434_47	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-0044434_47	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
PHROG	UHGV-0044434_48	phrog_7566	101.1	5.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0044434_48	97139.C824_05985	111.0	3.29e-30	N/A	N/A
KOfam	UHGV-0044434_50	K03497	134.1	1.7e-39	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0044434_50	phrog_6218	203.7	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0044434_50	UniRef90_A0A174L5M7	855.0	0	Probable chromosome-partitioning protein parB	N/A
eggNOG-mapper	UHGV-0044434_50	411461.DORFOR_01144	302.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0044434_50	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0044434_50	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0044434_50	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0044434_50	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0044434	Yes	33,517	41	100	1
UHGV-2068690	No	23,178	42	66	1
UHGV-0063984	No	21,881	41	63	1
UHGV-2073927	No	20,464	41	59	1
UHGV-0208981	No	17,572	41	50	1
UHGV-2062661	No	16,624	42	47	1
UHGV-2067951	No	10,011	42	29	1