vOTU vOTU-044965

vOTU: vOTU-044965

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-044965
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00630 → vGENUS-01924 → vSUBGEN-07620 → vOTU-044965
Host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1372231
Biosample ID	N/A
Genome length (bp)	36,049 bps
CheckV completeness	100.00% (Complete)
CDS count	68
CDS density	93.23%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660	Total connections	14	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660	Total connections	7	Host agreement	85.71

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1372231_1	K14059	200.3	0	int; integrase	N/A
PHROG	UHGV-1372231_1	phrog_1	171.6	0	integrase	integration and excision
UniRef90	UHGV-1372231_1	UniRef90_A0A1C3SJR3	190.0	0	Protein YdcL	N/A
eggNOG-mapper	UHGV-1372231_1	1118063.I7I4C5_9CAUD	171.0	0	Phage integrase family	N/A
Pfam	UHGV-1372231_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1372231_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-1372231_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1372231_2	UniRef90_R5AAT8	147.0	3.78351e-44	Peptidase_M78 domain-containing protein	N/A
Pfam	UHGV-1372231_2	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1372231_2	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1372231_3	K22299	41.6	0.0000000000061	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-1372231_3	UniRef90_UPI001F4D780E	67.4	0.000000000281	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1372231_3	435837.HMPREF0798_00830	68.2	0.0000000000305	Helix-turn-helix	N/A
Pfam	UHGV-1372231_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1372231_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-1372231_4	K22299	42.1	0.000000000018	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1372231_4	phrog_8	40.4	0.000000000064	transcriptional regulator	transcription regulation
UniRef90	UHGV-1372231_4	UniRef90_A0A2H0M530	48.5	0.00000478	DNA-binding protein	N/A
Pfam	UHGV-1372231_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1372231_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1372231_8	PF11372	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_10	phrog_16304	48.9	0.000000000000063	N/A	unknown function
UniRef90	UHGV-1372231_10	UniRef90_A0A6M3IY07	106.0	5.81e-25	N/A	N/A
eggNOG-mapper	UHGV-1372231_10	445971.ANASTE_00700	84.0	1.02e-16	N/A	N/A
Pfam	UHGV-1372231_10	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1372231_10	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1372231_10	PF07120,COG3756	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_12	phrog_1123	43.4	0.0000000000043	N/A	unknown function
UniRef90	UHGV-1372231_12	UniRef90_A0A7X6P6Q9	68.9	0.000000000000442	DNA gyrase	N/A
eggNOG-mapper	UHGV-1372231_12	1308863.U5J9F3_9CAUD	61.2	0.000000000109	N/A	N/A
structural_annotation	UHGV-1372231_12	PF03551,TIGR02719,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_14	phrog_674	116.8	1.6e-34	N/A	unknown function
UniRef90	UHGV-1372231_14	UniRef90_A0A7X7EMF4	164.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-1372231_14	411901.BACCAC_02353	148.0	5.66e-40	N/A	N/A
Pfam	UHGV-1372231_14	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1372231_14	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-1372231_17	K03111	127.0	2.2e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1372231_17	phrog_44	140.6	9.19952e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372231_17	UniRef90_A0A353JB48	121.0	1.4e-32	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1372231_17	1545701.LACWKB10_1167	116.0	1.41e-31	Single-strand binding protein family	N/A
Pfam	UHGV-1372231_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1372231_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1372231_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1372231_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1372231_17	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_18	phrog_1389	67.0	2.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1372231_18	1347392.CCEZ01000060_gene3269	70.5	0.0000000000000289	N/A	N/A
structural_annotation	UHGV-1372231_18	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_30	phrog_625	74.3	1.2e-21	N/A	unknown function
UniRef90	UHGV-1372231_30	UniRef90_A0A373D1H8	128.0	2.79e-36	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1372231_30	397290.C810_01502	112.0	1.18e-30	N/A	N/A
structural_annotation	UHGV-1372231_30	PF12961,NF003443,COG2947	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_32	phrog_11947	52.6	0.0000000000000072	N/A	unknown function
PHROG	UHGV-1372231_36	phrog_20735	190.7	0	N/A	unknown function
UniRef90	UHGV-1372231_36	UniRef90_R5A140	340.0	0	RNA_ligase domain-containing protein	N/A
Pfam	UHGV-1372231_36	PF09414	N/A	N/A	RNA ligase	RNA_ligase
structural_annotation	UHGV-1372231_36	PF09414,MF_04150,TIGR01209,COG1423	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_37	phrog_7445	53.7	0.0000000000000033	N/A	unknown function
Pfam	UHGV-1372231_37	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-1372231_37	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_38	phrog_8470	147.5	7.00649e-45	N/A	unknown function
UniRef90	UHGV-1372231_38	UniRef90_UPI001D12E223	95.9	6.21e-18	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1372231_38	1232449.BAHV02000018_gene1540	120.0	8.26e-27	PcfJ-like protein	N/A
Pfam	UHGV-1372231_38	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1372231_38	PF14284	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372231_40	PF15456	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372231_42	PF10922	N/A	N/A	N/A	N/A
UniRef90	UHGV-1372231_43	UniRef90_A0A353JAA0	122.0	5.49e-32	Terminase_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1372231_43	428125.CLOLEP_01805	92.8	2.96e-22	N/A	N/A
Pfam	UHGV-1372231_43	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
KOfam	UHGV-1372231_44	K06909	204.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1372231_44	phrog_10250	123.1	1.5e-36	N/A	unknown function
UniRef90	UHGV-1372231_44	UniRef90_A0A3B8SL24	654.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1372231_44	1235799.C818_04217	482.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1372231_44	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1372231_44	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1372231_44	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1372231_44	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1372231_44	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_45	phrog_533	269.1	0	portal protein	head and packaging
UniRef90	UHGV-1372231_45	UniRef90_R6Y8H1	493.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1372231_45	545697.HMPREF0216_02845	306.0	0	N/A	N/A
structural_annotation	UHGV-1372231_45	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_46	phrog_581	223.2	0	minor head protein	head and packaging
UniRef90	UHGV-1372231_46	UniRef90_R5XZV2	257.0	0	Protein gp4	N/A
eggNOG-mapper	UHGV-1372231_46	642492.Clole_0816	156.0	7.65e-39	N/A	N/A
Pfam	UHGV-1372231_46	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1372231_46	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-1372231_46	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372231_46	PF03496,PF04233,NF041404,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_48	phrog_194	47.5	0.00000000000034	head scaffolding protein	head and packaging
UniRef90	UHGV-1372231_48	UniRef90_UPI00117868A2	105.0	3.08e-25	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1372231_48	545697.HMPREF0216_02848	97.4	7.62e-23	Phage minor structural protein GP20	N/A
Pfam	UHGV-1372231_48	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1372231_48	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_49	phrog_422	185.4	0	major head protein	head and packaging
UniRef90	UHGV-1372231_49	UniRef90_A0A345MKD0	279.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-1372231_49	665956.HMPREF1032_02951	257.0	0	N/A	N/A
structural_annotation	UHGV-1372231_49	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_51	phrog_541	87.7	1.1e-25	head-tail adaptor	connector
UniRef90	UHGV-1372231_51	UniRef90_C4IFE6	62.0	0.00000000122	Putative gp8	N/A
eggNOG-mapper	UHGV-1372231_51	632245.CLP_1650	62.0	0.000000000205	N/A	N/A
PHROG	UHGV-1372231_52	phrog_3366	71.3	1.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-1372231_52	411462.DORLON_00784	53.5	0.000000291	N/A	N/A
structural_annotation	UHGV-1372231_52	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_53	phrog_556	53.5	0.0000000000000032	minor head protein	head and packaging
UniRef90	UHGV-1372231_53	UniRef90_UPI00067E9657	92.0	5.97e-21	minor capsid protein	N/A
eggNOG-mapper	UHGV-1372231_53	642492.Clole_0824	88.6	2.03e-20	Minor capsid protein	N/A
structural_annotation	UHGV-1372231_53	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_54	phrog_3266	105.0	4.9e-31	tail completion	connector
UniRef90	UHGV-1372231_54	UniRef90_A0A2N2DPR7	98.6	1.79e-23	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-1372231_54	536233.CLO_0890	85.5	3.61e-19	N/A	N/A
structural_annotation	UHGV-1372231_54	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_55	phrog_3099	89.7	3.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-1372231_55	1449050.JNLE01000003_gene3884	77.4	0.00000000000000161	N/A	N/A
structural_annotation	UHGV-1372231_56	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_57	phrog_706	143.4	1.3004e-42	N/A	unknown function
UniRef90	UHGV-1372231_57	UniRef90_UPI000B35C11D	140.0	7.29e-39	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-1372231_57	645991.Sgly_0348	144.0	3.37993e-41	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1372231_57	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1372231_57	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_58	phrog_1535	124.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1372231_58	UniRef90_A0A810PX76	105.0	3.85e-20	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1372231_58	1280692.AUJL01000027_gene2150	93.6	5.3e-17	phage tail tape measure protein	N/A
COG	UHGV-1372231_58	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372231_59	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_60	phrog_6616	60.1	2.3e-17	tail protein	tail
structural_annotation	UHGV-1372231_60	PF05113,TIGR01665,NF041249,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372231_63	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_64	phrog_2712	45.5	0.00000000000098	tail fiber protein	tail
eggNOG-mapper	UHGV-1372231_64	587753.EY04_17105	58.5	0.0000000233	N/A	N/A
structural_annotation	UHGV-1372231_64	PF15868,NF012201	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372231_66	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-1372231_67	UniRef90_UPI001D030A29	76.3	0.000000000000401	M23 family metallopeptidase	N/A
eggNOG-mapper	UHGV-1372231_67	428127.EUBDOL_01569	74.7	0.00000000000124	N/A	N/A
structural_annotation	UHGV-1372231_67	PF01551,PF08460,NF040883,COG0739,COG3103	N/A	N/A	N/A	N/A
PHROG	UHGV-1372231_68	phrog_7566	65.0	5.7e-19	N/A	unknown function
UniRef90	UHGV-1372231_68	UniRef90_A0A417V5I7	69.3	0.00000000000136	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1372231_68	1118057.CAGX01000020_gene1648	55.5	0.0000000405	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1372231	Yes	36,049	27	100	1
UHGV-0052259	No	36,049	27	100	1
UHGV-0015372	No	18,711	27	52	1
UHGV-1738472	No	13,391	28	37	1