vOTU vOTU-045023

vOTU: vOTU-045023

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-045023
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01593 → vGENUS-04765 → vSUBGEN-12869 → vOTU-045023
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0058663
Biosample ID	SAMEA2159338
Genome length (bp)	29,646 bps
CheckV completeness	100.00% (Complete)
CDS count	44
CDS density	92.65%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas	Total connections	18	Host agreement	94.44
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815	Total connections	10	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0058663_2	K06167	66.7	3.7e-19	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0058663_2	phrog_392	197.7	0	metal-dependent hydrolase	other
UniRef90	UHGV-0058663_2	UniRef90_A0A2A6Z7T9	267.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-0058663_2	537013.CLOSTMETH_01716	240.0	0	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0058663_2	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0058663_2	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0058663_2	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
KOfam	UHGV-0058663_3	K07455	192.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0058663_3	phrog_148	188.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0058663_3	UniRef90_R6QSG7	249.0	0	Recombinational DNA repair protein RecT (Prophage associated)	N/A
eggNOG-mapper	UHGV-0058663_3	1033744.CAEL01000029_gene1294	216.0	0	RecT family	N/A
Pfam	UHGV-0058663_3	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0058663_3	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0058663_3	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0058663_3	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0058663_4	K19171	77.7	1.3e-22	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0058663_4	phrog_77	202.0	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0058663_4	UniRef90_A0A2A6Z7T4	419.0	0	AAA_15 domain-containing protein	N/A
eggNOG-mapper	UHGV-0058663_4	537013.CLOSTMETH_01714	339.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0058663_4	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0058663_4	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0058663_6	PF19607	N/A	N/A	N/A	N/A
UniRef90	UHGV-0058663_8	UniRef90_UPI00117C9CA9	74.3	7.39e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0058663_8	1291050.JAGE01000002_gene3380	65.1	0.000000000000538	N/A	N/A
structural_annotation	UHGV-0058663_8	PF12728,TIGR01764	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_9	phrog_478	123.1	1.2e-36	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0058663_9	UniRef90_R6R5K5	144.0	8.29989e-42	Protein 64 protein	N/A
eggNOG-mapper	UHGV-0058663_9	1111121.HMPREF1247_0834	149.0	1.68156e-44	N/A	N/A
PHROG	UHGV-0058663_10	phrog_750	54.1	0.0000000000000018	N/A	unknown function
eggNOG-mapper	UHGV-0058663_10	742723.HMPREF9477_00931	69.3	0.000000000000063	N/A	N/A
structural_annotation	UHGV-0058663_10	PF13835,NF040858	N/A	N/A	N/A	N/A
KOfam	UHGV-0058663_13	K18830	64.8	2e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0058663_13	phrog_8	56.9	5.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0058663_13	UniRef90_R9K5V7	94.7	2.77e-23	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0058663_13	1235790.C805_00012	94.7	4.65e-24	Helix-turn-helix domain	N/A
PADLOC	UHGV-0058663_13	retron_type_VI_hth_cluster2_1	43.2	0.000000000012	N/A	Retron
Pfam	UHGV-0058663_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0058663_13	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0058663_14	UniRef90_N1Z2V2	114.0	2.41e-29	Integrase_SAM-like_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0058663_14	1291050.JAGE01000002_gene3375	137.0	4.57e-36	Belongs to the 'phage' integrase family	N/A
COG	UHGV-0058663_14	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
KOfam	UHGV-0058663_15	K07273	185.4	0	acm; lysozyme	N/A
PHROG	UHGV-0058663_15	phrog_291	139.5	3.09995e-41	endolysin	lysis
UniRef90	UHGV-0058663_15	UniRef90_UPI001E09FBEF	169.0	1.4013e-45	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0058663_15	877414.ATWA01000004_gene545	141.0	2.33e-36	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0058663_15	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0058663_15	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0058663_15	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0058663_15	PF01183,MF_00691,TIGR02869,NF003814,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_16	phrog_199	80.2	2.5e-23	holin	lysis
UniRef90	UHGV-0058663_16	UniRef90_UPI0009888550	171.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0058663_16	1298920.KI911353_gene4833	168.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0058663_16	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0058663_16	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0058663_16	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0058663_16	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_21	phrog_1272	265.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0058663_21	UniRef90_A0A3A6DL62	183.0	3.237e-43	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0058663_21	665950.HMPREF1025_02680	376.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0058663_21	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0058663_21	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0058663_21	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_22	phrog_706	96.8	2.3e-28	N/A	unknown function
UniRef90	UHGV-0058663_22	UniRef90_UPI0006828F20	100.0	4.9e-23	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0058663_22	411490.ANACAC_00711	93.6	7.61e-21	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0058663_22	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0058663_22	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_24	phrog_820	47.9	0.00000000000011	major tail protein	tail
UniRef90	UHGV-0058663_24	UniRef90_A0A174M1L1	125.0	1.34e-32	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0058663_24	411471.SUBVAR_06988	141.0	1.67e-40	N/A	N/A
structural_annotation	UHGV-0058663_24	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_25	phrog_3266	111.7	4.5e-33	tail completion	connector
UniRef90	UHGV-0058663_25	UniRef90_UPI000F637EFF	124.0	1.17e-33	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0058663_25	663278.Ethha_0098	75.9	0.00000000000000125	N/A	N/A
structural_annotation	UHGV-0058663_25	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_26	phrog_556	68.8	6.7e-20	minor head protein	head and packaging
UniRef90	UHGV-0058663_26	UniRef90_UPI001C10177D	141.0	6.73002e-41	minor capsid protein	N/A
eggNOG-mapper	UHGV-0058663_26	428127.EUBDOL_01220	63.9	0.0000000000401	N/A	N/A
Pfam	UHGV-0058663_26	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0058663_26	PF11114	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0058663_27	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_29	phrog_267	102.9	3.2e-30	major head protein	head and packaging
UniRef90	UHGV-0058663_29	UniRef90_A0A4P8IA69	377.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-0058663_29	748224.HMPREF9436_03335	444.0	0	N/A	N/A
structural_annotation	UHGV-0058663_29	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_30	phrog_194	95.2	8e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-0058663_30	UniRef90_UPI00177F4161	82.0	2.9e-16	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0058663_30	1158614.I592_01120	76.6	0.00000000000000597	Phage minor structural protein GP20	N/A
Pfam	UHGV-0058663_30	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0058663_30	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0058663_31	PF11344	N/A	N/A	N/A	N/A
UniRef90	UHGV-0058663_32	UniRef90_UPI001CEC2B18	68.9	0.00000000000757	minor capsid protein	N/A
eggNOG-mapper	UHGV-0058663_32	888060.HMPREF9081_1553	67.0	0.0000000000245	cell adhesion	N/A
COG	UHGV-0058663_32	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_33	phrog_581	336.4	0	minor head protein	head and packaging
UniRef90	UHGV-0058663_33	UniRef90_A0A417EY47	391.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0058663_33	645991.Sgly_0338	340.0	0	N/A	N/A
Pfam	UHGV-0058663_33	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0058663_33	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0058663_33	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_34	phrog_533	276.5	0	portal protein	head and packaging
UniRef90	UHGV-0058663_34	UniRef90_A0A7G9WF85	446.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0058663_34	718252.FP2_06700	458.0	0	N/A	N/A
structural_annotation	UHGV-0058663_34	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0058663_35	K06909	90.6	2.2e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0058663_35	phrog_2	106.9	3.4e-31	terminase large subunit	head and packaging
UniRef90	UHGV-0058663_35	UniRef90_UPI0019684892	676.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0058663_35	1449050.JNLE01000003_gene3895	380.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0058663_35	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0058663_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0058663_35	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_36	phrog_2412	75.3	8.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0058663_36	742738.HMPREF9460_02504	104.0	2.76e-26	N/A	N/A
eggNOG-mapper	UHGV-0058663_37	742738.HMPREF9460_02503	50.4	0.00000471	N/A	N/A
structural_annotation	UHGV-0058663_37	PF06530,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0058663_39	K07726	43.1	0.0000000000075	K07726; putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0058663_39	155864.EDL933_0960	52.0	0.00000213	helix-turn-helix	N/A
Pfam	UHGV-0058663_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0058663_39	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0058663_39	PF13560,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_41	phrog_190	108.9	4.6e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0058663_41	UniRef90_A0A6N7XIA3	120.0	6.05e-33	N/A	N/A
eggNOG-mapper	UHGV-0058663_41	1236514.BAKL01000051_gene3708	99.8	1.08e-25	N/A	N/A
Pfam	UHGV-0058663_41	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0058663_41	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0058663_42	phrog_9474	141.9	1.3004e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0058663_42	UniRef90_A0A2A6Z7R8	96.7	1.64e-19	DnaB_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0058663_42	697284.ERIC2_c10590	127.0	1.36e-31	Replication initiation and membrane attachment	N/A
Pfam	UHGV-0058663_42	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0058663_42	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0058663_42	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0058663_42	PF09681,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0058663_43	K03111	132.7	4.5e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0058663_43	phrog_44	135.5	3.7e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0058663_43	UniRef90_A0A316PSZ3	200.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0058663_43	1297617.JPJD01000076_gene1093	184.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0058663_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0058663_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0058663_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0058663_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0058663_43	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0058663	Yes	29,646	58	100	1
UHGV-0375241	No	17,115	58	50	1