vOTU vOTU-045130

vOTU: vOTU-045130

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-045130
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00190 → vSUBGEN-35290 → vOTU-045130
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_G
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0076686
Biosample ID	N/A
Genome length (bp)	40,723 bps
CheckV completeness	100.00% (Complete)
CDS count	66
CDS density	89.09%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_G	Total connections	1092	Host agreement	75.18
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	22	Host agreement	90.91

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0076686_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_3	phrog_20016	205.0	0	N/A	unknown function
UniRef90	UHGV-0076686_3	UniRef90_A0A285PT46	228.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0076686_3	1226322.HMPREF1545_00077	184.0	0	N/A	N/A
structural_annotation	UHGV-0076686_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_4	phrog_16490	165.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0076686_4	1408437.JNJN01000043_gene803	126.0	1.05e-32	N/A	N/A
PHROG	UHGV-0076686_5	phrog_22984	87.4	9.8e-26	N/A	unknown function
PHROG	UHGV-0076686_6	phrog_21718	114.5	8.3e-34	N/A	unknown function
eggNOG-mapper	UHGV-0076686_6	397290.C810_05210	97.1	2.37e-23	N/A	N/A
PHROG	UHGV-0076686_7	phrog_3754	96.5	2.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-0076686_7	1235790.C805_00054	110.0	9.17e-30	N/A	N/A
KOfam	UHGV-0076686_9	K23779	55.6	0.0000000000000014	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0076686_9	phrog_1373	41.8	0.000000000014	transcriptional regulator	transcription regulation
Pfam	UHGV-0076686_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0076686_9	COG1309	N/A	N/A	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	N/A
structural_annotation	UHGV-0076686_9	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_10	phrog_15303	77.6	1.3e-22	N/A	unknown function
KOfam	UHGV-0076686_12	K07273	158.6	0	acm; lysozyme	N/A
PHROG	UHGV-0076686_12	phrog_291	110.9	1.4e-32	endolysin	lysis
UniRef90	UHGV-0076686_12	UniRef90_A0A564U0D3	440.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0076686_12	718252.FP2_04890	249.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0076686_12	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0076686_12	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0076686_12	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-0076686_13	UniRef90_UPI001D07AB37	78.2	5.07e-18	XkdX family protein	N/A
eggNOG-mapper	UHGV-0076686_13	1203606.HMPREF1526_00257	74.7	2.51e-17	Phage uncharacterised protein (Phage_XkdX)	N/A
structural_annotation	UHGV-0076686_13	PF09693	N/A	N/A	N/A	N/A
KOfam	UHGV-0076686_14	K00986	108.3	9.5e-32	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0076686_14	phrog_1423	172.8	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076686_14	UniRef90_R8W3R1	585.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0076686_14	1203606.HMPREF1526_00259	585.0	0	COG COG3344 Retron-type reverse transcriptase	N/A
PADLOC	UHGV-0076686_14	icity0040	72.0	1.4e-20	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0076686_14	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0076686_14	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0076686_14	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_15	phrog_5302	135.0	5.19994e-41	tail protein	tail
UniRef90	UHGV-0076686_15	UniRef90_UPI001CBAF2B2	399.0	0	carboxypeptidase-like regulatory domain-containing protein	N/A
eggNOG-mapper	UHGV-0076686_15	1203606.HMPREF1526_00261	549.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0076686_15	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0076686_15	PF12985	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0076686_16	1235792.C808_00094	90.5	7.25e-20	phage tail	N/A
COG	UHGV-0076686_16	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0076686_16	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_17	phrog_3558	274.2	0	tail protein	tail
UniRef90	UHGV-0076686_17	UniRef90_UPI001C01D15B	682.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0076686_17	1120933.ATUY01000002_gene164	156.0	9.66e-38	Prophage endopeptidase tail	N/A
Pfam	UHGV-0076686_17	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0076686_17	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0076686_17	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_18	phrog_9959	88.7	3.9e-26	tail length tape measure protein	tail
UniRef90	UHGV-0076686_18	UniRef90_A0A844DDD5	525.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0076686_18	1492737.FEM08_12070	146.0	6.17e-34	tape measure	N/A
Pfam	UHGV-0076686_18	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0076686_18	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0076686_18	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0076686_18	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_21	phrog_885	53.3	0.0000000000000033	major tail protein	tail
eggNOG-mapper	UHGV-0076686_21	1504822.CCNO01000012_gene492	97.1	1.92e-22	N/A	N/A
structural_annotation	UHGV-0076686_21	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0076686_22	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_23	phrog_17977	43.9	0.0000000000036	N/A	unknown function
UniRef90	UHGV-0076686_23	UniRef90_A0A844DHJ8	119.0	1.63e-32	Phage head closure protein	N/A
structural_annotation	UHGV-0076686_23	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_25	phrog_544	139.0	3.80004e-41	major head protein	head and packaging
UniRef90	UHGV-0076686_25	UniRef90_R0BKA1	436.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0076686_25	476272.RUMHYD_01776	321.0	0	N/A	N/A
structural_annotation	UHGV-0076686_25	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_28	phrog_5	51.5	0.000000000000026	tail completion or Neck1 protein	connector
UniRef90	UHGV-0076686_28	UniRef90_A0A6N7TNP6	301.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0076686_28	1123309.AQYB01000018_gene814	93.2	2.81e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0076686_28	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0076686_28	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_31	phrog_8680	200.0	0	N/A	unknown function
UniRef90	UHGV-0076686_31	UniRef90_A0A844D688	393.0	0	N/A	N/A
eggNOG-mapper	UHGV-0076686_31	1423790.BN53_04265	173.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-0076686_31	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0076686_31	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0076686_31	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_34	phrog_2468	83.9	1.2e-24	head morphogenesis	head and packaging
UniRef90	UHGV-0076686_34	UniRef90_A0A6N7TLR7	596.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0076686_34	1504822.CCNO01000013_gene286	119.0	9.97e-27	cell adhesion	N/A
Pfam	UHGV-0076686_34	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0076686_34	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0076686_34	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_36	phrog_64	129.4	1.4e-38	portal protein	head and packaging
UniRef90	UHGV-0076686_36	UniRef90_A0A6N7TNT3	862.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0076686_36	642492.Clole_2764	80.1	0.000000000000314	phage portal protein, SPP1	N/A
Pfam	UHGV-0076686_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0076686_36	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0076686_37	K06909	141.0	1.10002e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0076686_37	phrog_10250	173.8	0	N/A	unknown function
UniRef90	UHGV-0076686_37	UniRef90_A0A844D8I4	835.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0076686_37	411490.ANACAC_00783	494.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0076686_37	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0076686_37	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0076686_37	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0076686_37	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0076686_37	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0076686_38	UniRef90_UPI0018CC2891	119.0	1.28e-31	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0076686_38	1235790.C805_00037	112.0	1.3e-29	N/A	N/A
structural_annotation	UHGV-0076686_38	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_39	phrog_36	56.8	4.4e-16	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0076686_39	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0076686_41	K01160	52.6	0.000000000000015	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0076686_41	phrog_34	52.8	0.0000000000000089	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076686_41	UniRef90_A0A6N7TND6	235.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0076686_41	875454.BAEW01000002_gene491	140.0	2.50006e-41	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0076686_41	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0076686_41	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0076686_41	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_42	phrog_3136	116.4	1.3e-34	N/A	unknown function
UniRef90	UHGV-0076686_42	UniRef90_A0A6N7TMC2	166.0	0	ASCH domain-containing protein	N/A
COG	UHGV-0076686_42	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0076686_42	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0076686_45	UniRef90_A0A845R8R0	103.0	5.54e-26	N/A	N/A
structural_annotation	UHGV-0076686_46	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0076686_47	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0076686_48	K02086	68.2	1.3e-19	dnaD; DNA replication protein	N/A
PHROG	UHGV-0076686_48	phrog_186	77.4	2.3e-22	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076686_48	UniRef90_A0A6N7TLH4	264.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0076686_48	877411.JMMA01000002_gene2292	68.9	0.0000000000669	N/A	N/A
Pfam	UHGV-0076686_48	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0076686_48	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0076686_48	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-0076686_48	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0076686_49	K03111	145.5	5.70328e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0076686_49	phrog_44	145.3	2.8026e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076686_49	UniRef90_D4K451	272.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0076686_49	718252.FP2_06770	272.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0076686_49	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0076686_49	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0076686_49	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0076686_49	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0076686_49	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_50	phrog_561	111.6	7.7e-33	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076686_50	UniRef90_UPI0011C8A287	148.0	2.73001e-41	recombinase RecT	N/A
eggNOG-mapper	UHGV-0076686_50	33035.JPJF01000071_gene4462	147.0	1.93996e-41	N/A	N/A
structural_annotation	UHGV-0076686_50	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0076686_55	PF10743,NF033787	N/A	N/A	N/A	N/A
KOfam	UHGV-0076686_56	K07741	141.8	1.10002e-41	antB; anti-repressor protein	N/A
PHROG	UHGV-0076686_56	phrog_63	112.7	4e-33	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0076686_56	UniRef90_A0A6N7TLD1	263.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-0076686_56	1230342.CTM_16892	219.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0076686_56	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0076686_56	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0076686_56	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0076686_56	PF03374,PF08346,TIGR02681,COG3561,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0076686_57	UniRef90_A0A1C7FQD9	82.4	3.15e-19	Transcriptional regulator	N/A
Pfam	UHGV-0076686_57	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0076686_57	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0076686_58	phrog_8	46.2	0.0000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0076686_58	UniRef90_UPI001966F1BB	84.3	1.87e-18	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0076686_58	1226322.HMPREF1545_00148	82.0	1.36e-18	Transcriptional	N/A
Pfam	UHGV-0076686_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0076686_58	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0076686_59	PF09202,MF_01819,NF041230,COG1321	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0076686_62	321955.AAGP01000017_gene2211	56.6	0.000000155	N/A	N/A
structural_annotation	UHGV-0076686_62	PF16900,NF040991	N/A	N/A	N/A	N/A
UniRef90	UHGV-0076686_65	UniRef90_A0A6N7TLT0	207.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0076686_65	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0076686_65	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0076686_66	K14059	139.0	5.90003e-41	int; integrase	N/A
PHROG	UHGV-0076686_66	phrog_1	164.0	0	integrase	integration and excision
UniRef90	UHGV-0076686_66	UniRef90_A0A6N7TNQ4	711.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0076686_66	411471.SUBVAR_05137	262.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0076686_66	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0076686_66	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0076686_66	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0076686	Yes	40,723	56	100	1
UHGV-1365947	No	40,723	56	100	1
UHGV-1809630	No	15,887	59	38	1