vOTU vOTU-045510

vOTU: vOTU-045510

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-045510
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00345 → vSUBGEN-02296 → vOTU-045510
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0105269
Biosample ID	SAMEA3708792
Genome length (bp)	41,127 bps
CheckV completeness	100.00% (Complete)
CDS count	58
CDS density	95.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	5	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	8	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0105269_1	phrog_18805	67.1	5.8e-30	N/A	unknown function
Pfam	UHGV-0105269_1	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-0105269_1	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
KOfam	UHGV-0105269_3	K18454	45.7	0.0000000000009	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-0105269_3	phrog_30034	71.9	1.3e-20	N/A	unknown function
UniRef90	UHGV-0105269_3	UniRef90_A0A1C5VT90	145.0	2.26029e-42	Chitinase A1	N/A
eggNOG-mapper	UHGV-0105269_3	1235796.C815_00903	128.0	2.2e-35	N/A	N/A
Pfam	UHGV-0105269_3	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0105269_3	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_4	phrog_937	59.3	8.2e-17	hemolysin	other
eggNOG-mapper	UHGV-0105269_4	1519439.JPJG01000023_gene533	74.3	4.42e-16	N/A	N/A
PHROG	UHGV-0105269_6	phrog_13256	70.7	1.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0105269_6	1226322.HMPREF1545_00166	68.6	0.0000000000000258	N/A	N/A
KOfam	UHGV-0105269_7	K01447	115.5	7e-34	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0105269_7	phrog_833	122.0	6.2e-36	endolysin	lysis
UniRef90	UHGV-0105269_7	UniRef90_A0A1V5KCB7	254.0	0	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
eggNOG-mapper	UHGV-0105269_7	1235802.C823_05611	162.0	0	Ami_2	N/A
Pfam	UHGV-0105269_7	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0105269_7	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0105269_7	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-0105269_8	UniRef90_A0A843IZ65	66.2	0.000000000000754	Sigma70_r4 domain-containing protein	N/A
structural_annotation	UHGV-0105269_8	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0105269_11	UniRef90_A0A8F1B662	76.3	0.0000000000000417	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0105269_11	1378168.N510_03079	63.9	0.00000000055	N/A	N/A
KOfam	UHGV-0105269_12	K06400	343.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0105269_12	phrog_95	341.3	0	integrase	integration and excision
UniRef90	UHGV-0105269_12	UniRef90_G4KP73	468.0	0	Putative site-specific recombinase	N/A
eggNOG-mapper	UHGV-0105269_12	693746.OBV_21880	468.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0105269_12	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0105269_12	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0105269_12	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0105269_12	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-0105269_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0105269_13	PF12844,MF_00535,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0105269_16	K18830	61.0	3e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0105269_16	phrog_8	57.8	2.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0105269_16	UniRef90_E2ZIF0	107.0	2.22e-27	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0105269_16	748224.HMPREF9436_01444	107.0	3.72e-28	N/A	N/A
PADLOC	UHGV-0105269_16	retron_type_VI_hth_cluster2_1	45.6	0.0000000000019	N/A	Retron
Pfam	UHGV-0105269_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0105269_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0105269_16	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_25	phrog_190	114.4	9.2e-34	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0105269_25	UniRef90_UPI0006C2AC63	124.0	2.64e-33	N/A	N/A
eggNOG-mapper	UHGV-0105269_25	1226322.HMPREF1545_00295	119.0	6.23e-32	N/A	N/A
Pfam	UHGV-0105269_25	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0105269_25	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_29	phrog_3136	135.7	1.4e-40	N/A	unknown function
UniRef90	UHGV-0105269_29	UniRef90_A0A329TS47	169.0	0	ASCH domain-containing protein	N/A
Pfam	UHGV-0105269_29	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0105269_29	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0105269_29	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0105269_31	K00390	93.7	2e-27	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0105269_31	phrog_424	117.7	9.8e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0105269_31	UniRef90_A0A3D3Y454	450.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-0105269_31	1408437.JNJN01000032_gene2312	324.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0105269_31	BrxP_00001	70.8	2.9e-22	BrxP	BREX
Pfam	UHGV-0105269_31	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0105269_31	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0105269_31	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_33	phrog_5781	72.0	8.9e-21	N/A	unknown function
UniRef90	UHGV-0105269_33	UniRef90_A0A2V2GDQ1	114.0	3.94e-31	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0105269_33	573061.Clocel_3558	91.7	1.15e-22	N/A	N/A
Pfam	UHGV-0105269_33	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0105269_33	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0105269_33	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_34	phrog_38832	56.9	6.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0105269_34	665956.HMPREF1032_00143	63.2	0.000000000313	N/A	N/A
structural_annotation	UHGV-0105269_34	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_35	phrog_2118	95.7	6.3e-28	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0105269_35	UniRef90_A0A417HX51	194.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0105269_35	1291050.JAGE01000001_gene468	108.0	3.44e-29	endonuclease activity	N/A
Pfam	UHGV-0105269_35	PF14279	N/A	N/A	HNH endonuclease	HNH_5
COG	UHGV-0105269_35	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0105269_35	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_36	phrog_31029	67.4	1.7e-19	N/A	unknown function
PHROG	UHGV-0105269_39	phrog_3584	118.5	4.8e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0105269_39	537013.CLOSTMETH_02141	85.1	1.73e-17	N/A	N/A
structural_annotation	UHGV-0105269_39	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_41	phrog_606	69.8	4.4e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0105269_41	UniRef90_UPI00195648BB	139.0	1.51e-39	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0105269_41	397290.C810_05185	124.0	3.1e-34	DNA-packaging protein gp3	N/A
Pfam	UHGV-0105269_41	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0105269_41	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0105269_42	K06909	142.2	4.79945e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0105269_42	phrog_979	132.0	1.4e-40	terminase large subunit	head and packaging
UniRef90	UHGV-0105269_42	UniRef90_A0A810Q5R0	636.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0105269_42	1410650.JHWL01000003_gene2834	619.0	0	N/A	N/A
Pfam	UHGV-0105269_42	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0105269_42	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0105269_42	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_43	phrog_511	240.9	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0105269_43	1410650.JHWL01000003_gene2827	301.0	0	N/A	N/A
structural_annotation	UHGV-0105269_43	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0105269_44	537007.BLAHAN_05255	73.2	0.0000000000517	N/A	N/A
Pfam	UHGV-0105269_45	PF00041	N/A	N/A	Fibronectin type III domain	fn3
structural_annotation	UHGV-0105269_45	PF00041,NF010681,COG3979	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0105269_46	PF21683	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_48	phrog_156	310.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0105269_48	1410650.JHWL01000003_gene2833	540.0	0	N/A	N/A
structural_annotation	UHGV-0105269_48	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_49	phrog_13908	130.6	1.1e-38	N/A	unknown function
eggNOG-mapper	UHGV-0105269_49	1410650.JHWL01000003_gene2831	90.1	4.53e-18	N/A	N/A
PHROG	UHGV-0105269_50	phrog_1357	215.9	0	major head protein	head and packaging
UniRef90	UHGV-0105269_50	UniRef90_A0A2V2CFL5	373.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0105269_50	1410650.JHWL01000003_gene2830	289.0	0	N/A	N/A
Pfam	UHGV-0105269_50	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0105269_50	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0105269_50	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_51	phrog_15239	40.0	0.000000000058	N/A	unknown function
PHROG	UHGV-0105269_52	phrog_12105	114.1	8.8e-34	N/A	unknown function
eggNOG-mapper	UHGV-0105269_52	1519439.JPJG01000060_gene1891	70.5	0.0000000000000701	N/A	N/A
UniRef90	UHGV-0105269_53	UniRef90_R5DCX9	150.0	2.71e-38	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0105269_53	1410650.JHWL01000003_gene2815	123.0	2.59e-28	N/A	N/A
PHROG	UHGV-0105269_54	phrog_22978	118.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0105269_54	1408437.JNJN01000039_gene389	491.0	0	heme binding	N/A
Pfam	UHGV-0105269_54	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
COG	UHGV-0105269_54	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
PHROG	UHGV-0105269_55	phrog_33872	58.0	1.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0105269_55	693746.OBV_19740	65.5	0.000000000000608	N/A	N/A
structural_annotation	UHGV-0105269_56	PF18962,NF011773	N/A	N/A	N/A	N/A
KOfam	UHGV-0105269_57	K16628	141.6	2.59941e-42	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0105269_57	phrog_6320	84.3	1.59748e-43	tail fiber protein	tail
eggNOG-mapper	UHGV-0105269_57	1519439.JPJG01000060_gene1892	88.6	0.0000000000000017	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0105269_57	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0105269_57	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0105269_57	PF06903	N/A	N/A	N/A	N/A
PHROG	UHGV-0105269_58	phrog_35892	45.6	0.00000000000032	N/A	unknown function
UniRef90	UHGV-0105269_58	UniRef90_A0A843FMD8	176.0	0	Leucine-rich repeat domain-containing protein	N/A
eggNOG-mapper	UHGV-0105269_58	471875.RUMLAC_02240	139.0	1.8e-35	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-0105269_58	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0105269_58	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0105269_58	PF14870,MF_01282,NF000022,COG4257	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0105269	Yes	41,127	57	100	1
UHGV-0111276	No	41,112	57	99	1
UHGV-2106881	No	41,081	57	98	1