vOTU vOTU-045785

vOTU: vOTU-045785

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-045785
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00034 → vSUBGEN-18415 → vOTU-045785
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1374358
Biosample ID	N/A
Genome length (bp)	42,811 bps
CheckV completeness	100.00% (Complete)
CDS count	72
CDS density	88.53%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	866	Host agreement	97.34
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	7	Host agreement	85.71

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1374358_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_3	phrog_20016	189.0	0	N/A	unknown function
UniRef90	UHGV-1374358_3	UniRef90_A0A285PT46	204.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1374358_3	1226322.HMPREF1545_00077	174.0	0	N/A	N/A
structural_annotation	UHGV-1374358_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_5	phrog_16490	147.4	7.9874e-44	N/A	unknown function
eggNOG-mapper	UHGV-1374358_5	1408437.JNJN01000043_gene803	144.0	2.15e-39	N/A	N/A
PHROG	UHGV-1374358_6	phrog_22984	80.5	1.2e-23	N/A	unknown function
PHROG	UHGV-1374358_7	phrog_21718	122.2	3.6e-36	N/A	unknown function
eggNOG-mapper	UHGV-1374358_7	397290.C810_05210	102.0	1.88e-25	N/A	N/A
PHROG	UHGV-1374358_8	phrog_3754	99.7	3e-29	N/A	unknown function
eggNOG-mapper	UHGV-1374358_8	1235790.C805_00054	111.0	6.47e-30	N/A	N/A
PHROG	UHGV-1374358_9	phrog_5765	54.0	0.0000000000000022	N/A	unknown function
UniRef90	UHGV-1374358_9	UniRef90_UPI001D0EF465	64.3	0.00000000000128	BC1881 family protein	N/A
eggNOG-mapper	UHGV-1374358_9	748727.CLJU_c31430	58.5	0.0000000000296	N/A	N/A
NCBIFam	UHGV-1374358_9	NF033495.1	N/A	N/A	BC1881 family protein	N/A
UniRef90	UHGV-1374358_13	UniRef90_UPI0018835F0C	427.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1374358_13	411483.FAEPRAA2165_00757	167.0	1.4013e-45	N/A	N/A
PHROG	UHGV-1374358_14	phrog_15303	112.3	2.6e-33	N/A	unknown function
Pfam	UHGV-1374358_14	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
KOfam	UHGV-1374358_16	K07273	163.4	0	acm; lysozyme	N/A
PHROG	UHGV-1374358_16	phrog_291	135.9	3.9e-40	endolysin	lysis
UniRef90	UHGV-1374358_16	UniRef90_E2ZES5	336.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-1374358_16	748224.HMPREF9436_00154	336.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1374358_16	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1374358_16	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1374358_16	PF01183,COG3757	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1374358_19	748224.HMPREF9436_01407	201.0	0	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-1374358_20	phrog_3558	200.8	0	tail protein	tail
UniRef90	UHGV-1374358_20	UniRef90_R9C6X0	67.8	0.0000000271	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-1374358_20	1035184.HMPREF1042_1326	83.6	0.0000000000000466	Prophage endopeptidase tail	N/A
Pfam	UHGV-1374358_20	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1374358_20	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1374358_20	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-1374358_21	UniRef90_A0A417QGC1	117.0	1.6e-28	MtfA protein	N/A
eggNOG-mapper	UHGV-1374358_21	411490.ANACAC_00709	104.0	2.78e-24	phage tail	N/A
COG	UHGV-1374358_21	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1374358_21	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_22	phrog_28775	122.7	2.9e-36	tail length tape measure protein	tail
UniRef90	UHGV-1374358_22	UniRef90_A0A6N7TLD3	1385.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1374358_22	411470.RUMGNA_02228	126.0	4.2e-27	tape measure	N/A
Pfam	UHGV-1374358_22	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1374358_22	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1374358_22	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1374358_22	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_25	phrog_885	61.4	1.2e-17	major tail protein	tail
eggNOG-mapper	UHGV-1374358_25	1111121.HMPREF1247_0789	117.0	1.62e-30	N/A	N/A
structural_annotation	UHGV-1374358_25	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374358_26	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_27	phrog_17977	42.2	0.000000000012	N/A	unknown function
UniRef90	UHGV-1374358_27	UniRef90_A0A844DHJ8	120.0	8.09e-33	Phage head closure protein	N/A
structural_annotation	UHGV-1374358_27	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_29	phrog_544	139.7	2.29995e-41	major head protein	head and packaging
UniRef90	UHGV-1374358_29	UniRef90_R0BKA1	437.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1374358_29	476272.RUMHYD_01776	320.0	0	N/A	N/A
structural_annotation	UHGV-1374358_29	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_32	phrog_5	50.3	0.000000000000062	tail completion or Neck1 protein	connector
UniRef90	UHGV-1374358_32	UniRef90_A0A6N7TNP6	290.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1374358_32	1123309.AQYB01000018_gene814	89.7	6.34e-21	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1374358_32	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1374358_32	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
KOfam	UHGV-1374358_33	K07741	73.7	5.8e-21	antB; anti-repressor protein	N/A
PHROG	UHGV-1374358_33	phrog_130	232.2	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1374358_33	UniRef90_A0A396LJD2	345.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1374358_33	663952.SDD27957_09050	257.0	0	COG3617 Prophage antirepressor	N/A
Pfam	UHGV-1374358_33	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1374358_33	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1374358_33	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1374358_33	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374358_34	PF07342	N/A	N/A	N/A	N/A
KOfam	UHGV-1374358_35	K07727	87.3	3e-25	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-1374358_35	phrog_3	44.1	0.0000000000087	transcriptional repressor	transcription regulation
UniRef90	UHGV-1374358_35	UniRef90_UPI001D0E8318	110.0	1.57e-29	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1374358_35	1117108.PAALTS15_13457	92.8	8.6e-24	Transcriptional regulator	N/A
Pfam	UHGV-1374358_35	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1374358_35	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1374358_35	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_36	phrog_2468	78.6	7.8e-23	head morphogenesis	head and packaging
UniRef90	UHGV-1374358_36	UniRef90_A0A6N7TLR7	618.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1374358_36	1504822.CCNO01000013_gene286	115.0	2e-25	cell adhesion	N/A
Pfam	UHGV-1374358_36	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1374358_36	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374358_36	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_37	phrog_64	120.2	7.8e-36	portal protein	head and packaging
UniRef90	UHGV-1374358_37	UniRef90_A0A6N7TNT3	894.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1374358_37	642492.Clole_2764	78.2	0.00000000000129	phage portal protein, SPP1	N/A
Pfam	UHGV-1374358_37	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1374358_37	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1374358_38	K06909	138.9	4.90006e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1374358_38	phrog_10250	174.5	0	N/A	unknown function
UniRef90	UHGV-1374358_38	UniRef90_A0A844D8I4	847.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1374358_38	411490.ANACAC_00783	493.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1374358_38	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1374358_38	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1374358_38	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1374358_38	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1374358_38	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1374358_39	UniRef90_UPI0018CC2891	115.0	5.69e-30	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1374358_39	1235790.C805_00037	112.0	2.51e-29	N/A	N/A
structural_annotation	UHGV-1374358_39	PF04218	N/A	N/A	N/A	N/A
UniRef90	UHGV-1374358_40	UniRef90_A0A6N7TNN9	70.5	0.00000000000231	N/A	N/A
structural_annotation	UHGV-1374358_40	PF07374	N/A	N/A	N/A	N/A
UniRef90	UHGV-1374358_41	UniRef90_UPI001C009709	118.0	2.77e-31	N/A	N/A
KOfam	UHGV-1374358_42	K01160	62.1	1.8e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1374358_42	phrog_34	61.4	1.8e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1374358_42	UniRef90_A0A6N7TND6	227.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1374358_42	875454.BAEW01000002_gene491	131.0	6.2e-38	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1374358_42	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1374358_42	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1374358_42	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_43	phrog_7711	105.3	4.7e-31	N/A	unknown function
eggNOG-mapper	UHGV-1374358_43	1304866.K413DRAFT_1204	95.1	2.38e-23	N/A	N/A
PHROG	UHGV-1374358_45	phrog_757	172.0	0	DNA methyltransferase	other
UniRef90	UHGV-1374358_45	UniRef90_UPI001C00B13F	437.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1374358_45	748224.HMPREF9436_03069	327.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1374358_45	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1374358_45	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374358_48	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_49	phrog_15768	130.4	1.7e-38	N/A	unknown function
UniRef90	UHGV-1374358_49	UniRef90_A0A844D5V0	208.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1374358_49	748224.HMPREF9436_03357	140.0	5.37e-38	N/A	N/A
Pfam	UHGV-1374358_49	PF19808	N/A	N/A	N/A	DUF6291
UniRef90	UHGV-1374358_50	UniRef90_UPI001CBB85F6	117.0	3.76e-30	single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1374358_50	PF00436,MF_00720,NF004512,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_51	phrog_2760	184.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1374358_51	UniRef90_A0A3A6EAW6	533.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-1374358_51	1235794.C811_01355	155.0	1.12945e-42	RecT family	N/A
Pfam	UHGV-1374358_51	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1374358_51	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-1374358_51	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1374358_51	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_52	phrog_674	146.0	2.90069e-43	N/A	unknown function
UniRef90	UHGV-1374358_52	UniRef90_A0A3A6E846	476.0	0	N/A	N/A
eggNOG-mapper	UHGV-1374358_52	556268.OFAG_00840	84.0	6.98e-16	N/A	N/A
Pfam	UHGV-1374358_52	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1374358_52	PF07083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374358_53	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374358_55	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1374358_56	PF12270,NF040944	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1374358_60	1121865.OMW_01950	75.1	7.98e-17	N/A	N/A
structural_annotation	UHGV-1374358_60	PF17516,NF007197	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1374358_61	760568.Desku_0919	96.7	5.19e-22	N/A	N/A
structural_annotation	UHGV-1374358_61	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-1374358_62	K07741	93.9	4.5e-27	antB; anti-repressor protein	N/A
PHROG	UHGV-1374358_62	phrog_63	190.2	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1374358_62	UniRef90_A0A2J4JRR8	434.0	0	Phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-1374358_62	1423816.BACQ01000027_gene970	250.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1374358_62	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-1374358_62	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-1374358_62	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1374358_62	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-1374358_62	PF03374,PF09669,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-1374358_65	UniRef90_UPI0018995761	75.5	1.12e-16	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-1374358_65	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_66	phrog_8	44.2	0.0000000000044	transcriptional regulator	transcription regulation
UniRef90	UHGV-1374358_66	UniRef90_UPI001CBE4822	97.8	3.9e-24	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1374358_66	1226322.HMPREF1545_00148	86.7	1.95e-20	Transcriptional	N/A
Pfam	UHGV-1374358_66	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1374358_66	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1374358_66	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1374358_69	phrog_888	62.0	6.7e-34	N/A	unknown function
UniRef90	UHGV-1374358_69	UniRef90_A0A6N7TMA2	443.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-1374358_69	999411.HMPREF1092_03312	79.3	0.00000000000000653	Short C-terminal domain	N/A
Pfam	UHGV-1374358_69	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-1374358_69	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-1374358_69	PF15947,PF14471	N/A	N/A	N/A	N/A
UniRef90	UHGV-1374358_71	UniRef90_A0A6N7TLT0	341.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1374358_71	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1374358_71	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1374358_71	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1374358_72	K14059	138.0	1.2e-40	int; integrase	N/A
PHROG	UHGV-1374358_72	phrog_1	160.0	0	integrase	integration and excision
UniRef90	UHGV-1374358_72	UniRef90_A0A6N7TNQ4	734.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1374358_72	411471.SUBVAR_05137	261.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1374358_72	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1374358_72	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1374358_72	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1374358	Yes	42,811	55	100	1
UHGV-0118661	No	42,811	55	100	1