vOTU vOTU-045838

vOTU: vOTU-045838

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-045838
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_H
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-03869 → vSUBGEN-28288 → vOTU-045838
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0121309
Biosample ID	SAMEA103958167
Genome length (bp)	38,176 bps
CheckV completeness	100.00% (Complete)
CDS count	63
CDS density	90.29%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	215	Host agreement	96.28
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_H	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0121309_1	K14059	194.3	0	int; integrase	N/A
PHROG	UHGV-0121309_1	phrog_1	197.2	0	integrase	integration and excision
UniRef90	UHGV-0121309_1	UniRef90_A0A367GI93	248.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0121309_1	1507.HMPREF0262_00307	172.0	0	Phage integrase family	N/A
Pfam	UHGV-0121309_1	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0121309_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0121309_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0121309_1	PF00589,PF13102,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0121309_2	UniRef90_A0A2A7AM70	382.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0121309_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0121309_2	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_5	phrog_888	135.1	4.9e-40	N/A	unknown function
UniRef90	UHGV-0121309_5	UniRef90_A0A6N7TMA2	314.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-0121309_5	1415774.U728_165	88.2	4.33e-18	Short C-terminal domain	N/A
Pfam	UHGV-0121309_5	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-0121309_5	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-0121309_5	PF15947,PF14471	N/A	N/A	N/A	N/A
KOfam	UHGV-0121309_8	K02342	192.6	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0121309_8	phrog_192	173.6	0	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0121309_8	UniRef90_UPI0009BC4B95	283.0	0	exonuclease	N/A
eggNOG-mapper	UHGV-0121309_8	1123288.SOV_2c03960	277.0	0	DNA polymerase III	N/A
PADLOC	UHGV-0121309_8	cd06127	140.3	1.70006e-41	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0121309_8	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0121309_8	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
NCBIFam	UHGV-0121309_8	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-0121309_8	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0121309_8	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
KOfam	UHGV-0121309_9	K22300	53.7	0.0000000000000043	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0121309_9	phrog_8	45.6	0.0000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0121309_9	UniRef90_UPI00115ECC35	61.6	0.000000000663	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0121309_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0121309_9	COG3780	N/A	N/A	DNA endonuclease related to intein-encoded endonucleases	N/A
structural_annotation	UHGV-0121309_9	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
Pfam	UHGV-0121309_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0121309_10	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_14	phrog_2715	147.5	3.64338e-44	N/A	unknown function
eggNOG-mapper	UHGV-0121309_14	718252.FP2_16370	160.0	0	N/A	N/A
structural_annotation	UHGV-0121309_14	PF18406	N/A	N/A	N/A	N/A
COG	UHGV-0121309_15	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0121309_15	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_16	phrog_72	50.5	0.000000000000034	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0121309_16	411471.SUBVAR_05829	139.0	3.78e-39	N/A	N/A
structural_annotation	UHGV-0121309_16	PF05772,NF007281	N/A	N/A	N/A	N/A
Pfam	UHGV-0121309_17	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0121309_18	phrog_7566	80.0	2.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0121309_18	411471.SUBVAR_05830	105.0	3.19e-28	N/A	N/A
KOfam	UHGV-0121309_19	K03111	149.5	3.22299e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0121309_19	phrog_44	147.2	8.54792e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0121309_19	UniRef90_A0A2A7ALU9	292.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0121309_19	718252.FP2_05080	213.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0121309_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0121309_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0121309_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0121309_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0121309_19	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_20	phrog_6969	64.0	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0121309_20	1232446.BAIE02000002_gene816	73.2	0.00000000000203	N/A	N/A
Pfam	UHGV-0121309_20	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-0121309_20	PF04182,MF_01819,TIGR04176,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0121309_21	K03496	223.5	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0121309_21	phrog_164	158.0	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0121309_21	UniRef90_A0A2A7AM64	517.0	0	Cobyrinic acid a,c-diamide synthase	N/A
eggNOG-mapper	UHGV-0121309_21	411471.SUBVAR_05839	218.0	0	AAA domain	N/A
Pfam	UHGV-0121309_21	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0121309_21	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0121309_21	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0121309_23	K03497	79.4	6.7e-23	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0121309_23	phrog_4715	109.7	2.1e-32	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0121309_23	UniRef90_A0A2A7AMC5	543.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0121309_23	411471.SUBVAR_05842	171.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0121309_23	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0121309_23	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0121309_23	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0121309_24	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_27	phrog_21498	302.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0121309_27	78346.BRUM_0376	262.0	0	DNA binding	N/A
COG	UHGV-0121309_27	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0121309_27	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_28	phrog_119	60.2	3.2e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0121309_28	UniRef90_A0A2A7AM49	245.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0121309_28	610130.Closa_0739	106.0	3.62e-28	HNH nucleases	N/A
Pfam	UHGV-0121309_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0121309_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0121309_30	phrog_13845	63.8	2.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0121309_30	508419.F8J158_9CAUD	73.9	0.00000000000000225	N/A	N/A
Pfam	UHGV-0121309_30	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0121309_30	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_31	phrog_9	235.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0121309_31	UniRef90_A0A2A7ALT4	1124.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0121309_31	1235792.C808_00083	630.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0121309_31	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0121309_31	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0121309_31	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_32	phrog_12	126.8	1.4e-37	portal protein	head and packaging
UniRef90	UHGV-0121309_32	UniRef90_A0A2A7AM75	830.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0121309_32	349161.Dred_2606	280.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0121309_32	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0121309_32	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0121309_32	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0121309_32	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0121309_33	K01358	89.7	4.5e-26	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0121309_33	phrog_94	141.9	7.19987e-42	head maturation protease	head and packaging
UniRef90	UHGV-0121309_33	UniRef90_UPI001C10F40E	168.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0121309_33	1232452.BAIB02000007_gene1626	154.0	1.63952e-43	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0121309_33	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0121309_33	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0121309_33	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_34	phrog_10	142.5	4.60046e-42	major head protein	head and packaging
UniRef90	UHGV-0121309_34	UniRef90_A0A2A7AMP4	849.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0121309_34	1235792.C808_00086	402.0	0	Phage capsid family	N/A
Pfam	UHGV-0121309_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0121309_34	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0121309_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0121309_34	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0121309_34	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_35	phrog_749	55.1	0.0000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0121309_35	349161.Dred_2603	89.4	9.02e-22	N/A	N/A
PHROG	UHGV-0121309_36	phrog_19734	89.5	3.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0121309_36	349161.Dred_2602	75.5	9.15e-16	N/A	N/A
structural_annotation	UHGV-0121309_36	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0121309_37	999413.HMPREF1094_02005	79.3	8.4e-18	N/A	N/A
structural_annotation	UHGV-0121309_37	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_38	phrog_5	40.6	0.000000000024	tail completion or Neck1 protein	connector
UniRef90	UHGV-0121309_38	UniRef90_R6UNR2	114.0	3.4e-29	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0121309_38	908340.HMPREF9406_2573	114.0	5.7e-30	N/A	N/A
structural_annotation	UHGV-0121309_38	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_39	phrog_88	96.3	3.3e-28	major tail protein	tail
UniRef90	UHGV-0121309_39	UniRef90_UPI0018771F27	117.0	2.01e-29	phage tail protein	N/A
eggNOG-mapper	UHGV-0121309_39	349161.Dred_2600	64.7	0.000000000827	N/A	N/A
NCBIFam	UHGV-0121309_39	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0121309_39	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_42	phrog_9959	72.3	3.3e-21	tail length tape measure protein	tail
UniRef90	UHGV-0121309_42	UniRef90_A0A2A7ALS3	1669.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0121309_42	1492737.FEM08_12070	155.0	7.55e-37	tape measure	N/A
Pfam	UHGV-0121309_42	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0121309_42	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0121309_42	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0121309_42	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_43	phrog_33	99.9	4.2e-29	distal tail protein Dit	tail
UniRef90	UHGV-0121309_43	UniRef90_A0A173Z1X4	149.0	7.84993e-41	Phage-related protein	N/A
eggNOG-mapper	UHGV-0121309_43	439292.Bsel_2995	99.8	1.2e-22	tail component	N/A
COG	UHGV-0121309_43	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0121309_43	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_44	phrog_1067	201.3	0	minor head protein	head and packaging
UniRef90	UHGV-0121309_44	UniRef90_A0A2A7AM44	1060.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0121309_44	1123263.AUKY01000068_gene489	200.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0121309_44	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0121309_44	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0121309_44	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0121309_44	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_46	phrog_27381	41.1	1.8e-20	tail fiber protein	tail
PHROG	UHGV-0121309_47	phrog_2712	50.8	0.000000000000021	tail fiber protein	tail
PHROG	UHGV-0121309_49	phrog_1382	49.1	0.000000000000047	N/A	unknown function
KOfam	UHGV-0121309_50	K07273	166.7	0	acm; lysozyme	N/A
PHROG	UHGV-0121309_50	phrog_291	137.8	9.70007e-41	endolysin	lysis
UniRef90	UHGV-0121309_50	UniRef90_UPI001D0EE7D8	261.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0121309_50	748224.HMPREF9436_00154	247.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0121309_50	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0121309_50	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0121309_50	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_52	phrog_15303	80.8	1.3e-23	N/A	unknown function
PHROG	UHGV-0121309_53	phrog_918	98.6	3.2e-29	N/A	unknown function
UniRef90	UHGV-0121309_53	UniRef90_UPI000EC62F11	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-0121309_53	1256908.HMPREF0373_00480	141.0	5.43704e-43	N/A	N/A
Pfam	UHGV-0121309_53	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0121309_53	PF19791	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0121309_55	1384065.JAGS01000001_gene3265	48.1	0.00000505	sequence-specific DNA binding	N/A
COG	UHGV-0121309_55	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0121309_55	PF13560,NF040522	N/A	N/A	N/A	N/A
UniRef90	UHGV-0121309_59	UniRef90_A0A1Y3R5J8	50.1	0.000000922	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0121309_59	1160721.RBI_I00206	58.9	0.000000000051	N/A	N/A
Pfam	UHGV-0121309_59	PF09274	N/A	N/A	ParG	ParG
structural_annotation	UHGV-0121309_59	PF10723	N/A	N/A	N/A	N/A
PHROG	UHGV-0121309_61	phrog_22984	50.8	0.000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-0121309_62	1485543.JMME01000025_gene2459	50.4	0.00000144	N/A	N/A
eggNOG-mapper	UHGV-0121309_63	1378168.N510_03079	77.4	0.00000000000000834	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0121309	Yes	38,176	53	100	1