vOTU vOTU-045856

vOTU: vOTU-045856

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-045856
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-02136 → vGENUS-06190 → vSUBGEN-22997 → vOTU-045856
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → UMGS1375 → UMGS1375 sp900066615
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0123092
Biosample ID	SAMEA37119418
Genome length (bp)	39,496 bps
CheckV completeness	100.00% (Complete)
CDS count	56
CDS density	91.76%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → UMGS1375 → UMGS1375 sp900066615	Total connections	157	Host agreement	75.16
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → UMGS1375 → UMGS1375 sp900066615	Total connections	40	Host agreement	97.5

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0123092_1	phrog_9958	40.5	0.000000000021	N/A	unknown function
UniRef90	UHGV-0123092_1	UniRef90_A0A412ELZ1	240.0	0	N/A	N/A
Pfam	UHGV-0123092_1	PF19789	N/A	N/A	N/A	DUF6273
PHROG	UHGV-0123092_3	phrog_36	75.4	9.9e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0123092_3	UniRef90_UPI001D089637	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0123092_3	1304866.K413DRAFT_3028	164.0	0	N/A	N/A
Pfam	UHGV-0123092_3	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0123092_3	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_4	phrog_119	77.2	2.3e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0123092_4	UniRef90_A0A1C6DZR4	204.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0123092_4	86416.Clopa_0335	96.7	8.56e-25	HNH nucleases	N/A
Pfam	UHGV-0123092_4	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0123092_4	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0123092_4	PF05766,NF008448	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_6	phrog_9	260.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0123092_6	UniRef90_A0A1C6DZH3	1128.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0123092_6	1235798.C817_02581	605.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0123092_6	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0123092_6	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0123092_6	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0123092_6	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_7	phrog_12	138.9	3.09995e-41	portal protein	head and packaging
UniRef90	UHGV-0123092_7	UniRef90_A0A1C6E0D8	773.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0123092_7	86416.Clopa_0339	395.0	0	Phage portal protein	N/A
Pfam	UHGV-0123092_7	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0123092_7	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0123092_7	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0123092_7	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0123092_8	K01358	123.7	2.2e-36	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0123092_8	phrog_94	219.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0123092_8	UniRef90_A0A1C6DZF0	525.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0123092_8	1235792.C808_00085	239.0	0	Clp protease	N/A
Pfam	UHGV-0123092_8	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0123092_8	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0123092_8	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_9	phrog_10	113.7	1.8e-33	major head protein	head and packaging
UniRef90	UHGV-0123092_9	UniRef90_A0A1C6DZ71	766.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0123092_9	610130.Closa_0744	379.0	0	Phage capsid family	N/A
Pfam	UHGV-0123092_9	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0123092_9	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0123092_9	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0123092_9	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_10	phrog_749	74.6	1.1e-21	N/A	unknown function
UniRef90	UHGV-0123092_10	UniRef90_UPI001C0F1EE0	89.7	1.87e-21	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0123092_10	1347392.CCEZ01000045_gene14	79.7	2.7e-18	N/A	N/A
PHROG	UHGV-0123092_11	phrog_19734	74.9	1.1e-21	N/A	unknown function
UniRef90	UHGV-0123092_11	UniRef90_A0A0D8I708	76.3	0.00000000000000114	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0123092_11	1211817.CCAT010000053_gene2134	68.9	0.000000000000101	N/A	N/A
Pfam	UHGV-0123092_11	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0123092_11	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_12	phrog_5	55.4	0.0000000000000018	tail completion or Neck1 protein	connector
UniRef90	UHGV-0123092_12	UniRef90_A0A1C6DYP9	256.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0123092_12	411459.RUMOBE_00932	118.0	1.56e-32	Phage protein, HK97 gp10 family	N/A
Pfam	UHGV-0123092_12	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0123092_12	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0123092_12	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0123092_13	1235792.C808_03059	71.6	0.000000000000465	phage major tail protein, phi13 family	N/A
COG	UHGV-0123092_13	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0123092_13	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_14	phrog_88	109.9	2.2e-32	major tail protein	tail
UniRef90	UHGV-0123092_14	UniRef90_A0A1C6DYZ6	372.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0123092_14	1195236.CTER_5106	139.0	2.98e-39	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0123092_14	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0123092_14	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0123092_14	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_15	phrog_2115	47.7	0.00000000000032	tail protein	tail
structural_annotation	UHGV-0123092_15	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-0123092_17	K20478	88.1	1.9e-28	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0123092_17	phrog_5218	296.3	0	N/A	unknown function
UniRef90	UHGV-0123092_17	UniRef90_A0A1C6DY47	2639.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0123092_17	908340.HMPREF9406_2570	288.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0123092_17	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0123092_17	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0123092_18	457396.CSBG_01058	73.9	0.000000000000667	phage tail	N/A
COG	UHGV-0123092_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0123092_18	PF20753,PF19266,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_19	phrog_18110	228.8	0	N/A	unknown function
UniRef90	UHGV-0123092_19	UniRef90_A0A1C6DYP3	1085.0	0	Phage minor structural protein, N-terminal region	N/A
eggNOG-mapper	UHGV-0123092_19	411459.RUMOBE_01723	155.0	5.42e-38	Phage minor structural protein	N/A
Pfam	UHGV-0123092_19	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0123092_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0123092_19	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0123092_20	phrog_16164	94.1	4e-28	N/A	unknown function
eggNOG-mapper	UHGV-0123092_20	1235802.C823_01049	158.0	1.46e-40	N/A	N/A
Pfam	UHGV-0123092_20	PF19789	N/A	N/A	N/A	DUF6273
PHROG	UHGV-0123092_21	phrog_37799	67.6	9.4e-20	N/A	unknown function
UniRef90	UHGV-0123092_21	UniRef90_UPI00156F2401	268.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0123092_21	1151292.QEW_0990	137.0	1.64e-39	Bacteriophage holin family	N/A
Pfam	UHGV-0123092_21	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0123092_21	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0123092_21	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0123092_21	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0123092_22	K07741	200.1	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0123092_22	phrog_63	178.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0123092_22	UniRef90_UPI001570760D	410.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0123092_22	658655.HMPREF0988_02592	343.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0123092_22	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0123092_22	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0123092_22	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0123092_22	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0123092_23	UniRef90_K1U6U8	85.5	4.17e-21	Protein phosphatase 1 regulatory subunit 14A	N/A
eggNOG-mapper	UHGV-0123092_23	478749.BRYFOR_07649	72.0	1.26e-16	N/A	N/A
AcrCatalog	UHGV-0123092_23	cluster_13845	68.6	1.1e-19	NA	N/A
UniRef90	UHGV-0123092_24	UniRef90_A0A8J8ME07	51.6	0.000000477	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0123092_24	1235802.C823_04889	60.1	0.0000000000357	N/A	N/A
KOfam	UHGV-0123092_25	K11062	172.0	0	entD; probable enterotoxin D	N/A
PHROG	UHGV-0123092_25	phrog_1794	234.5	0	amidase	lysis
UniRef90	UHGV-0123092_25	UniRef90_UPI001570B791	558.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0123092_25	411470.RUMGNA_02087	309.0	0	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0123092_25	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0123092_25	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0123092_25	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-0123092_27	K01142	187.3	0	E3.1.11.2, xthA; exodeoxyribonuclease III [EC:3.1.11.2]	N/A
PHROG	UHGV-0123092_27	phrog_19169	125.9	3.1e-37	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0123092_27	UniRef90_A0A1C6J7C3	225.0	0	Exodeoxyribonuclease III	N/A
eggNOG-mapper	UHGV-0123092_27	1410624.JNKK01000011_gene2246	189.0	0	Endonuclease/Exonuclease/phosphatase family	N/A
Pfam	UHGV-0123092_27	PF03372	N/A	N/A	Endonuclease/Exonuclease/phosphatase family	Exo_endo_phos
NCBIFam	UHGV-0123092_27	TIGR00633.1	N/A	N/A	exodeoxyribonuclease III	N/A
COG	UHGV-0123092_27	COG0708	N/A	N/A	Exonuclease III	N/A
structural_annotation	UHGV-0123092_27	NF010489,COG0708	N/A	N/A	N/A	N/A
KOfam	UHGV-0123092_28	K06400	286.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0123092_28	phrog_95	287.7	0	integrase	integration and excision
UniRef90	UHGV-0123092_28	UniRef90_A0A1C5R4R0	987.0	0	Transposase and inactivated derivatives	N/A
eggNOG-mapper	UHGV-0123092_28	1128398.Curi_c22150	295.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0123092_28	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0123092_28	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0123092_28	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0123092_28	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_29	phrog_37898	161.2	0	N/A	unknown function
UniRef90	UHGV-0123092_29	UniRef90_UPI000E434E8B	180.0	0	N/A	N/A
eggNOG-mapper	UHGV-0123092_29	877414.ATWA01000082_gene1189	108.0	1.93e-29	N/A	N/A
Pfam	UHGV-0123092_29	PF10387	N/A	N/A	N/A	DUF2442
structural_annotation	UHGV-0123092_29	PF10387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0123092_30	180332.JTGN01000007_gene3629	117.0	1.61e-29	N/A	N/A
KOfam	UHGV-0123092_31	K18830	54.4	0.0000000000000027	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0123092_31	phrog_8	52.3	0.000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0123092_31	UniRef90_A0A3D4RBY0	214.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0123092_31	742741.HMPREF9475_00400	102.0	2.3e-26	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0123092_31	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0123092_31	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0123092_31	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0123092_46	K03427	48.8	0.000000000000092	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0123092_46	phrog_5696	219.6	0	N/A	unknown function
UniRef90	UHGV-0123092_46	UniRef90_A0A1C5WE14	414.0	0	Type I restriction-modification system methyltransferase subunit	N/A
eggNOG-mapper	UHGV-0123092_46	1245471.PCA10_p0930	159.0	1.4013e-45	N-6 DNA Methylase	N/A
Pfam	UHGV-0123092_46	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0123092_46	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0123092_46	COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-0123092_47	K04763	195.2	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0123092_47	phrog_1	150.8	1.26117e-44	integrase	integration and excision
UniRef90	UHGV-0123092_47	UniRef90_A0A1C5WDY2	674.0	0	Tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0123092_47	610130.Closa_3343	195.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0123092_47	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0123092_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0123092_47	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0123092_47	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_48	phrog_3584	152.1	4.2039e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0123092_48	97139.C824_06117	224.0	0	N/A	N/A
structural_annotation	UHGV-0123092_48	PF01446	N/A	N/A	N/A	N/A
COG	UHGV-0123092_49	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0123092_49	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_50	phrog_7566	109.8	9.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-0123092_50	97139.C824_05985	120.0	1.23e-33	N/A	N/A
KOfam	UHGV-0123092_51	K03111	124.6	1.3e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0123092_51	phrog_44	134.6	7.4e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0123092_51	UniRef90_A0A1C5WD91	253.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0123092_51	537007.BLAHAN_04317	213.0	0	N/A	N/A
Pfam	UHGV-0123092_51	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0123092_51	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0123092_51	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0123092_51	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0123092_51	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0123092_52	1235792.C808_00065	206.0	0	N/A	N/A
PHROG	UHGV-0123092_53	phrog_8470	353.1	0	N/A	unknown function
UniRef90	UHGV-0123092_53	UniRef90_UPI001D086F83	813.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0123092_53	97139.C824_00039	831.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0123092_53	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0123092_53	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0123092_54	phrog_15077	123.5	3.5e-36	N/A	unknown function
UniRef90	UHGV-0123092_54	UniRef90_UPI00191E9544	269.0	0	N/A	N/A
eggNOG-mapper	UHGV-0123092_54	97139.C824_05986	284.0	0	N/A	N/A
Pfam	UHGV-0123092_54	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-0123092_54	PF11300,NF033725	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0123092	Yes	39,496	45	100	1
UHGV-1321054	No	17,881	46	48	1