vOTU vOTU-045934

vOTU: vOTU-045934

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-045934
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00200 → vGENUS-01453 → vSUBGEN-01215 → vOTU-045934
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0387958
Biosample ID	SAMN03283282
Genome length (bp)	34,051 bps
CheckV completeness	100.00% (Complete)
CDS count	50
CDS density	92.83%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	149	Host agreement	94.63
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900551995	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0387958_1	phrog_435	57.8	2.2e-16	endolysin	lysis
UniRef90	UHGV-0387958_1	UniRef90_A0A8D9PDS4	407.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-0387958_1	1226322.HMPREF1545_01953	90.9	3.52e-19	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-0387958_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0387958_1	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_2	phrog_1129	67.7	1.1e-19	holin	lysis
UniRef90	UHGV-0387958_2	UniRef90_A0A1Q6RI18	122.0	2.59e-34	Enolase	N/A
eggNOG-mapper	UHGV-0387958_2	1226322.HMPREF1545_00069	129.0	8.58e-38	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0387958_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0387958_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_3	phrog_1863	64.5	9.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0387958_3	748224.HMPREF9436_00408	94.4	1.38e-24	N/A	N/A
PHROG	UHGV-0387958_5	phrog_24451	50.2	0.000000000000045	N/A	unknown function
eggNOG-mapper	UHGV-0387958_5	1408437.JNJN01000040_gene189	120.0	1.75e-33	N/A	N/A
KOfam	UHGV-0387958_6	K03646	47.1	0.0000000000005	tolA; colicin import membrane protein	N/A
eggNOG-mapper	UHGV-0387958_6	1408437.JNJN01000002_gene1389	60.5	0.000000659	N/A	N/A
structural_annotation	UHGV-0387958_6	PF10651,PF04862,TIGR04362,COG5513	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0387958_7	PF17642	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_8	phrog_1067	298.4	0	minor head protein	head and packaging
UniRef90	UHGV-0387958_8	UniRef90_A0A316NPB5	492.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0387958_8	1123263.AUKY01000068_gene489	350.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0387958_8	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0387958_8	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0387958_8	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0387958_8	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_9	phrog_33	82.6	7.6e-24	distal tail protein Dit	tail
UniRef90	UHGV-0387958_9	UniRef90_A0A2X2UUQ3	165.0	0	Phage putative tail component	N/A
eggNOG-mapper	UHGV-0387958_9	994573.T472_0211980	97.8	5.18e-22	tail component	N/A
COG	UHGV-0387958_9	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0387958_9	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_10	phrog_58	103.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0387958_10	UniRef90_A0A1Y4R6K5	181.0	2.94273e-44	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0387958_10	588581.Cpap_1264	186.0	0	Tail tape measure protein, TP901 family	N/A
COG	UHGV-0387958_10	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0387958_10	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_13	phrog_88	94.8	9.4e-28	major tail protein	tail
UniRef90	UHGV-0387958_13	UniRef90_A0A1C6CIL7	134.0	5.41e-35	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0387958_13	33035.JPJF01000039_gene278	74.3	0.000000000000108	N/A	N/A
NCBIFam	UHGV-0387958_13	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0387958_13	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_14	phrog_5	44.0	0.000000000004	tail completion or Neck1 protein	connector
UniRef90	UHGV-0387958_14	UniRef90_A0A1C6FG30	133.0	8.43e-37	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0387958_14	908340.HMPREF9406_2573	132.0	4.77e-37	N/A	N/A
structural_annotation	UHGV-0387958_14	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0387958_15	999413.HMPREF1094_02005	84.7	9.77e-20	N/A	N/A
structural_annotation	UHGV-0387958_15	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_16	phrog_19734	116.4	1.7e-34	N/A	unknown function
UniRef90	UHGV-0387958_16	UniRef90_A0A6I7GNS7	125.0	1.67e-34	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0387958_16	1235798.C817_04587	61.6	0.000000000161	N/A	N/A
structural_annotation	UHGV-0387958_16	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_17	phrog_749	68.6	7.7e-20	N/A	unknown function
UniRef90	UHGV-0387958_17	UniRef90_UPI001C0FB8A8	54.3	0.000000198	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0387958_17	349161.Dred_2603	77.8	2.55e-17	N/A	N/A
PHROG	UHGV-0387958_18	phrog_10	138.7	5.99994e-41	major head protein	head and packaging
UniRef90	UHGV-0387958_18	UniRef90_G9YSC0	686.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0387958_18	1235792.C808_00086	422.0	0	Phage capsid family	N/A
Pfam	UHGV-0387958_18	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0387958_18	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0387958_18	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0387958_18	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0387958_18	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0387958_19	K01358	133.6	2.1e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0387958_19	phrog_94	251.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0387958_19	UniRef90_A0A1Y4BT12	351.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0387958_19	349161.Dred_2605	303.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0387958_19	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0387958_19	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0387958_19	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_20	phrog_12	109.7	9e-33	portal protein	head and packaging
UniRef90	UHGV-0387958_20	UniRef90_UPI0018755FA4	505.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0387958_20	610130.Closa_0742	292.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0387958_20	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0387958_20	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0387958_20	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0387958_20	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_21	phrog_9	249.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0387958_21	UniRef90_UPI0018737C02	905.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0387958_21	1235792.C808_00083	598.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0387958_21	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0387958_21	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0387958_21	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0387958_21	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_22	phrog_5110	61.0	1.3e-17	terminase small subunit	head and packaging
UniRef90	UHGV-0387958_22	UniRef90_UPI00195E8788	125.0	8.27e-34	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0387958_22	1265845.PWEIH_00610	52.8	0.000002	Phage terminase, small subunit	N/A
Pfam	UHGV-0387958_22	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0387958_22	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0387958_23	K03497	46.7	0.00000000000041	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0387958_23	phrog_21498	267.3	0	N/A	unknown function
UniRef90	UHGV-0387958_23	UniRef90_A0A7X2P836	294.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0387958_23	469378.Ccur_02830	267.0	0	DNA binding	N/A
PADLOC	UHGV-0387958_23	MTase_II_00015	88.2	1.1e-25	Type II methyltransferase	RM
Pfam	UHGV-0387958_23	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0387958_23	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0387958_23	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_24	phrog_119	70.8	1.7e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0387958_24	UniRef90_G9YSB5	150.0	4.2039e-45	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0387958_24	1235792.C808_00081	81.6	1.6e-18	HNH nucleases	N/A
Pfam	UHGV-0387958_24	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0387958_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0387958_25	UniRef90_UPI001F232519	74.7	2.75e-16	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0387958_25	1226322.HMPREF1545_00110	68.9	0.00000000000000866	Cysteine-rich KTR	N/A
Pfam	UHGV-0387958_25	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0387958_25	PF14205	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_26	phrog_3584	73.6	2.6e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0387958_26	693746.OBV_19950	249.0	0	N/A	N/A
structural_annotation	UHGV-0387958_26	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0387958_35	K03497	81.4	1.7e-23	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0387958_35	phrog_27290	358.1	0	N/A	unknown function
UniRef90	UHGV-0387958_35	UniRef90_UPI0003130F10	297.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0387958_35	1007096.BAGW01000033_gene1613	297.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0387958_35	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0387958_35	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0387958_35	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
KOfam	UHGV-0387958_36	K03496	172.9	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0387958_36	phrog_164	131.9	5e-39	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0387958_36	UniRef90_UPI000318E277	264.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0387958_36	1007096.BAGW01000033_gene1614	254.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0387958_36	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0387958_36	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0387958_36	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0387958_37	K02314	257.7	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0387958_37	phrog_19	219.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0387958_37	UniRef90_UPI00195856D7	385.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0387958_37	1226322.HMPREF1545_00095	247.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0387958_37	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0387958_37	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0387958_37	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0387958_37	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_38	phrog_270	108.0	1.1e-31	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0387958_38	UniRef90_UPI001F170B82	179.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0387958_38	742738.HMPREF9460_00851	176.0	0	Helix-turn-helix domain	N/A
Pfam	UHGV-0387958_38	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0387958_38	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0387958_40	phrog_6499	121.0	4.7e-36	transcriptional regulator	transcription regulation
UniRef90	UHGV-0387958_40	UniRef90_G9YL68	140.0	7.21e-40	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0387958_40	742738.HMPREF9460_00847	140.0	8.44002e-41	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0387958_40	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0387958_40	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0387958_40	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0387958_41	K22300	60.6	3.6e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0387958_41	phrog_3	49.3	0.0000000000002	transcriptional repressor	transcription regulation
UniRef90	UHGV-0387958_41	UniRef90_UPI000F0D19B9	63.5	0.00000000000718	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0387958_41	1125712.HMPREF1316_2427	51.2	0.0000011	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0387958_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0387958_41	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0387958_41	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0387958_42	phrog_8	41.8	0.000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0387958_42	UniRef90_A0A1C5PF11	99.0	1.08e-25	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0387958_42	1226322.HMPREF1545_02466	99.0	1.81e-26	Cro/C1-type HTH DNA-binding domain	N/A
structural_annotation	UHGV-0387958_42	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0387958_43	PF14947,NF041230,COG3432	N/A	N/A	N/A	N/A
KOfam	UHGV-0387958_47	K02342	146.5	1.79366e-43	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0387958_47	phrog_192	136.8	1.10001e-40	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0387958_47	UniRef90_UPI001873C260	148.0	5.64e-38	3'-5' exoribonuclease	N/A
eggNOG-mapper	UHGV-0387958_47	545694.TREPR_3623	126.0	3.21e-31	EXOIII	N/A
PADLOC	UHGV-0387958_47	cd06127	113.6	2.7e-33	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0387958_47	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0387958_47	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0387958_47	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0387958_47	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0387958_49	1211819.CALK01000014_gene381	69.7	0.0000000000346	TM2 domain	N/A
Pfam	UHGV-0387958_49	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0387958_49	COG2314	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0387958_49	PF08797,PF01668,TIGR00086,COG0691	N/A	N/A	N/A	N/A
KOfam	UHGV-0387958_50	K14059	151.2	1.26117e-44	int; integrase	N/A
PHROG	UHGV-0387958_50	phrog_1	147.8	8.26766e-44	integrase	integration and excision
UniRef90	UHGV-0387958_50	UniRef90_UPI001EDEB0AD	295.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0387958_50	1226322.HMPREF1545_00144	243.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0387958_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0387958_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0387958_50	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0387958	Yes	34,051	59	100	1
UHGV-0131318	No	34,051	59	100	1
UHGV-1341373	No	34,149	59	100	1
UHGV-1513681	No	17,607	61	52	1
UHGV-1769722	No	13,849	61	40	1
UHGV-1612369	No	12,500	61	36	1