vOTU vOTU-045967

vOTU: vOTU-045967

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-045967
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01321 → vGENUS-05232 → vSUBGEN-19777 → vOTU-045967
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0134376
Biosample ID	N/A
Genome length (bp)	39,848 bps
CheckV completeness	100.00% (Complete)
CDS count	48
CDS density	91.92%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	37	Host agreement	97.3
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	5	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0134376_1	phrog_757	59.1	7.6e-17	DNA methyltransferase	other
UniRef90	UHGV-0134376_1	UniRef90_K1SX16	175.0	0	Site-specific DNA methylase	N/A
eggNOG-mapper	UHGV-0134376_1	622312.ROSEINA2194_01264	175.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-0134376_1	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0134376_1	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
eggNOG-mapper	UHGV-0134376_2	411473.RUMCAL_00286	136.0	4.44e-39	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-0134376_2	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0134376_3	K00571	109.6	4e-32	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0134376_3	phrog_23224	195.6	0	DNA methyltransferase	other
UniRef90	UHGV-0134376_3	UniRef90_D4K450	334.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0134376_3	718252.FP2_06750	334.0	0	DNA methylase	N/A
PADLOC	UHGV-0134376_3	MTase_II_00172	85.2	2.5e-26	Type II methyltransferase	RM
Pfam	UHGV-0134376_3	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0134376_3	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0134376_3	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0134376_6	phrog_3136	128.1	3e-38	N/A	unknown function
UniRef90	UHGV-0134376_6	UniRef90_A0A3D0HBD2	159.0	0	ASCH domain-containing protein	N/A
Pfam	UHGV-0134376_6	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0134376_6	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
PHROG	UHGV-0134376_7	phrog_22543	42.3	0.000000000012	N/A	unknown function
UniRef90	UHGV-0134376_7	UniRef90_A0A8D9PDK2	63.5	0.0000000000277	Zinc-ribbon containing domain	N/A
PHROG	UHGV-0134376_10	phrog_5781	92.9	3.7e-27	N/A	unknown function
UniRef90	UHGV-0134376_10	UniRef90_A0A413FXK8	102.0	2.89e-26	N/A	N/A
eggNOG-mapper	UHGV-0134376_10	1397284.AYMN01000083_gene2419	91.3	8.29e-23	N/A	N/A
Pfam	UHGV-0134376_10	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0134376_10	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0134376_10	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0134376_11	phrog_3584	112.2	4.2e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0134376_11	1226322.HMPREF1545_03841	97.1	3.12e-21	N/A	N/A
structural_annotation	UHGV-0134376_11	PF01446,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-0134376_13	UniRef90_A0A3A9EH82	84.3	3.46e-18	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0134376_13	397288.C806_03010	74.7	0.00000000000000415	N/A	N/A
structural_annotation	UHGV-0134376_13	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0134376_14	K06909	124.2	1.4e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0134376_14	phrog_979	134.0	4.80001e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0134376_14	UniRef90_A0A810Q5R0	620.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0134376_14	1410650.JHWL01000003_gene2834	597.0	0	N/A	N/A
Pfam	UHGV-0134376_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0134376_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0134376_14	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0134376_15	phrog_156	343.2	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0134376_15	1410650.JHWL01000003_gene2833	555.0	0	N/A	N/A
structural_annotation	UHGV-0134376_15	PF16510,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0134376_16	K07584	56.0	8.8e-16	N/A	N/A
PHROG	UHGV-0134376_16	phrog_4478	63.2	3e-18	peptidase	other
UniRef90	UHGV-0134376_16	UniRef90_UPI001D097508	54.3	0.000000251	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0134376_16	555088.DealDRAFT_1009	54.7	0.0000000391	Pfam:Peptidase_C108	N/A
Pfam	UHGV-0134376_16	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0134376_16	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0134376_16	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0134376_17	phrog_13908	156.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0134376_17	1410650.JHWL01000003_gene2831	93.2	6.48e-19	N/A	N/A
PHROG	UHGV-0134376_18	phrog_1357	212.4	0	major head protein	head and packaging
UniRef90	UHGV-0134376_18	UniRef90_A0A2V2CFL5	468.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0134376_18	1410650.JHWL01000003_gene2830	263.0	0	N/A	N/A
Pfam	UHGV-0134376_18	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0134376_18	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0134376_18	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0134376_20	phrog_12105	130.0	1e-38	N/A	unknown function
eggNOG-mapper	UHGV-0134376_20	1226322.HMPREF1545_03850	96.7	4.21e-24	N/A	N/A
PHROG	UHGV-0134376_21	phrog_511	232.1	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0134376_21	1410650.JHWL01000003_gene2827	360.0	0	N/A	N/A
structural_annotation	UHGV-0134376_21	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0134376_22	phrog_15074	67.8	2.1e-31	N/A	unknown function
UniRef90	UHGV-0134376_22	UniRef90_UPI000E5CB7B2	100.0	7.05e-19	phage tail protein	N/A
eggNOG-mapper	UHGV-0134376_22	762982.HMPREF9442_01191	115.0	1.57e-24	cellulase activity	N/A
COG	UHGV-0134376_22	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-0134376_23	phrog_372	214.6	0	tail protein	tail
UniRef90	UHGV-0134376_23	UniRef90_UPI0002BB22B5	75.9	0.000000000133	N/A	N/A
eggNOG-mapper	UHGV-0134376_23	1211844.CBLM010000016_gene1479	110.0	7.63e-23	N/A	N/A
Pfam	UHGV-0134376_23	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0134376_23	PF05895,MF_04116,NF010681,COG3291,COG5608	N/A	N/A	N/A	N/A
PHROG	UHGV-0134376_24	phrog_2649	62.7	9.5e-18	endolysin	lysis
UniRef90	UHGV-0134376_24	UniRef90_A0A810PWK0	227.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0134376_24	1203606.HMPREF1526_02741	79.7	0.000000000000072	N/A	N/A
Pfam	UHGV-0134376_24	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
structural_annotation	UHGV-0134376_24	PF01471,TIGR02869,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0134376_25	phrog_22978	490.7	0	N/A	unknown function
UniRef90	UHGV-0134376_25	UniRef90_A0A2V2FDI6	436.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0134376_25	1410650.JHWL01000003_gene2814	345.0	0	N/A	N/A
Pfam	UHGV-0134376_25	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-0134376_25	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-0134376_25	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
PHROG	UHGV-0134376_27	phrog_1129	70.3	1.9e-20	holin	lysis
UniRef90	UHGV-0134376_27	UniRef90_A0A810PUU2	184.0	0	Holin	N/A
eggNOG-mapper	UHGV-0134376_27	1410668.JNKC01000001_gene1676	96.7	3.74e-25	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0134376_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0134376_27	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0134376_28	K01448	70.2	3.2e-20	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0134376_28	phrog_435	95.0	8.2e-28	endolysin	lysis
UniRef90	UHGV-0134376_28	UniRef90_A0A810PZ73	440.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0134376_28	697281.Mahau_0598	121.0	3.6e-30	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0134376_28	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0134376_28	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-0134376_28	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0134376_28	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0134376_28	PF01520,PF08230,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
UniRef90	UHGV-0134376_29	UniRef90_A0A8D9PDQ3	60.5	0.000000000133	ECF sigma factor	N/A
structural_annotation	UHGV-0134376_29	PF04545,MF_00674,NF009179,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0134376_30	UniRef90_A0A1Y3RJS2	89.7	1.06e-18	Sigma70_r4_2 domain-containing protein	N/A
UniRef90	UHGV-0134376_32	UniRef90_A0A843GWV6	108.0	7.92e-29	Rubrerythrin domain-containing protein	N/A
KOfam	UHGV-0134376_33	K06400	328.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0134376_33	phrog_95	324.6	0	integrase	integration and excision
UniRef90	UHGV-0134376_33	UniRef90_G4KP73	673.0	0	Putative site-specific recombinase	N/A
eggNOG-mapper	UHGV-0134376_33	693746.OBV_21880	673.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0134376_33	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0134376_33	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0134376_33	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0134376_33	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0134376_33	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0134376_34	UniRef90_A0A810PZB1	124.0	4.13e-32	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0134376_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0134376_34	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0134376_36	K22300	65.8	9.4e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0134376_36	phrog_4	51.7	0.000000000000024	transcriptional repressor	transcription regulation
UniRef90	UHGV-0134376_36	UniRef90_A0A1C6CFH8	133.0	8.65e-38	Putative zinc finger/helix-turn-helix protein, YgiT family	N/A
eggNOG-mapper	UHGV-0134376_36	903814.ELI_1263	123.0	1.03e-34	Helix-turn-helix domain	N/A
Pfam	UHGV-0134376_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0134376_36	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0134376_36	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0134376_38	UniRef90_UPI001BCDFE46	126.0	3.29e-29	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-0134376_38	756499.Desde_3141	57.8	0.00000157	Bacterial Ig-like domain 2	N/A
Pfam	UHGV-0134376_38	PF13619	N/A	N/A	KTSC domain	KTSC
NCBIFam	UHGV-0134376_38	NF033223.2	N/A	N/A	YHYH domain-containing protein	N/A
COG	UHGV-0134376_38	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0134376_39	PF21327	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0134376_41	1519439.JPJG01000060_gene1868	77.8	1.86e-18	N/A	N/A
PHROG	UHGV-0134376_42	phrog_7566	89.4	2.7e-26	N/A	unknown function
UniRef90	UHGV-0134376_42	UniRef90_A0A8D9UHC0	106.0	4.54e-28	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0134376_42	1007096.BAGW01000031_gene114	105.0	1.98e-28	N/A	N/A
structural_annotation	UHGV-0134376_45	NF040595	N/A	N/A	N/A	N/A
KOfam	UHGV-0134376_48	K00390	61.5	6.6e-18	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0134376_48	phrog_424	137.4	9.79998e-41	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0134376_48	UniRef90_A0A1H7KWC5	304.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-0134376_48	665956.HMPREF1032_00140	293.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0134376_48	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0134376_48	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0134376_48	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0134376	Yes	39,848	57	100	1
UHGV-1345393	No	17,615	58	41	1
UHGV-1741514	No	15,126	58	35	1
UHGV-0192404	No	15,124	58	35	1
UHGV-0138336	No	12,729	55	30	1