vOTU vOTU-046398

vOTU: vOTU-046398

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-046398
Number of genomes	6
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00089 → vSUBGEN-07351 → vOTU-046398
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0169983
Biosample ID	N/A
Genome length (bp)	40,798 bps
CheckV completeness	100.00% (Complete)
CDS count	55
CDS density	92.77%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	143	Host agreement	93.71
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	26	Host agreement	92.31

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0169983_1	UniRef90_UPI00164EA432	223.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0169983_1	525254.HMPREF0072_1273	219.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0169983_1	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0169983_1	NF033743	N/A	N/A	N/A	N/A
KOfam	UHGV-0169983_3	K19167	108.8	7.1e-32	abiQ; protein AbiQ	N/A
PHROG	UHGV-0169983_3	phrog_9764	114.9	6.6e-34	N/A	unknown function
UniRef90	UHGV-0169983_3	UniRef90_A0A845R8D8	216.0	0	Type III toxin-antitoxin system ToxN/AbiQ family toxin	N/A
eggNOG-mapper	UHGV-0169983_3	1519439.JPJG01000060_gene1906	178.0	0	Toxin ToxN, type III toxin-antitoxin system	N/A
PADLOC	UHGV-0169983_3	AbiQ	135.2	7.29999e-40	AbiQ	Abi
Pfam	UHGV-0169983_3	PF13958	N/A	N/A	Toxin ToxN, type III toxin-antitoxin system	ToxN_toxin
structural_annotation	UHGV-0169983_3	PF13958	N/A	N/A	N/A	N/A
UniRef90	UHGV-0169983_6	UniRef90_A0A8F0WD75	79.3	0.00000000000000207	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0169983_6	1378168.N510_03079	70.5	0.00000000000212	N/A	N/A
KOfam	UHGV-0169983_7	K14059	208.7	0	int; integrase	N/A
PHROG	UHGV-0169983_7	phrog_1	199.2	0	integrase	integration and excision
UniRef90	UHGV-0169983_7	UniRef90_A0A8F2JBJ7	254.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0169983_7	1507.HMPREF0262_00307	201.0	0	Phage integrase family	N/A
Pfam	UHGV-0169983_7	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0169983_7	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0169983_7	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0169983_7	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0169983_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0169983_8	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0169983_12	K18830	56.6	7.1e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0169983_12	phrog_8	46.9	0.00000000000059	transcriptional regulator	transcription regulation
UniRef90	UHGV-0169983_12	UniRef90_A0A350VVA2	94.7	1.09e-22	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0169983_12	1280698.AUJS01000007_gene1002	65.5	0.0000000000119	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0169983_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0169983_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0169983_12	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169983_15	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169983_17	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169983_18	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-0169983_22	K00390	98.7	7.2e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0169983_22	phrog_424	113.5	1.9e-33	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0169983_22	UniRef90_UPI001D087498	403.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0169983_22	1408437.JNJN01000032_gene2312	315.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0169983_22	BrxP_00001	72.0	5.3e-21	BrxP	BREX
Pfam	UHGV-0169983_22	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0169983_22	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0169983_22	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_23	phrog_3136	140.0	3.59994e-42	N/A	unknown function
UniRef90	UHGV-0169983_23	UniRef90_UPI001C26B029	174.0	0	ASCH domain-containing protein	N/A
Pfam	UHGV-0169983_23	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0169983_23	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0169983_23	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_24	phrog_38832	58.1	1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0169983_24	445972.ANACOL_00165	54.7	0.00000138	N/A	N/A
PHROG	UHGV-0169983_27	phrog_190	100.6	1.7e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0169983_27	UniRef90_UPI0006C2AC63	125.0	9.29e-34	N/A	N/A
eggNOG-mapper	UHGV-0169983_27	1226322.HMPREF1545_00295	117.0	1.77e-31	N/A	N/A
Pfam	UHGV-0169983_27	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0169983_27	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_29	phrog_374	51.6	0.000000000000019	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0169983_29	387344.LVIS_0713	66.6	0.00000000000729	N/A	N/A
PHROG	UHGV-0169983_31	phrog_2245	85.2	7.2e-25	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0169983_31	UniRef90_A0A4U9RLZ8	65.1	0.0000000000839	N/A	N/A
eggNOG-mapper	UHGV-0169983_31	706433.HMPREF9430_01279	64.7	0.0000000000242	N/A	N/A
structural_annotation	UHGV-0169983_31	PF08271	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_32	phrog_9467	176.1	0	N/A	unknown function
UniRef90	UHGV-0169983_32	UniRef90_UPI0015B3EAA7	134.0	1.45e-37	Gp49 family protein	N/A
eggNOG-mapper	UHGV-0169983_32	1519439.JPJG01000060_gene1880	177.0	0	N/A	N/A
Pfam	UHGV-0169983_32	PF13876	N/A	N/A	N/A	Phage_gp49_66
dbAPIS	UHGV-0169983_32	APIS043	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169983_32	PF13876	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_33	phrog_3584	114.1	1.2e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0169983_33	537013.CLOSTMETH_02141	62.0	0.00000000577	N/A	N/A
structural_annotation	UHGV-0169983_33	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_34	phrog_606	68.9	8.3e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0169983_34	UniRef90_UPI001F487344	128.0	2.41e-35	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0169983_34	397290.C810_05185	129.0	7e-36	DNA-packaging protein gp3	N/A
Pfam	UHGV-0169983_34	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0169983_34	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0169983_35	K06909	150.4	1.54143e-44	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0169983_35	phrog_979	138.3	3.00018e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0169983_35	UniRef90_A0A810Q5R0	647.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0169983_35	1410650.JHWL01000003_gene2834	620.0	0	N/A	N/A
Pfam	UHGV-0169983_35	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0169983_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0169983_35	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_36	phrog_511	231.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0169983_36	1410650.JHWL01000003_gene2827	322.0	0	N/A	N/A
structural_annotation	UHGV-0169983_36	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0169983_37	537007.BLAHAN_05255	59.3	0.00000131	N/A	N/A
PHROG	UHGV-0169983_38	phrog_37329	46.0	0.00000000000054	N/A	unknown function
Pfam	UHGV-0169983_38	PF00041	N/A	N/A	Fibronectin type III domain	fn3
COG	UHGV-0169983_38	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0169983_38	PF17744,PF16655,MF_01905,NF038116,COG3979,COG2033	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_40	phrog_156	289.9	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0169983_40	1410650.JHWL01000003_gene2833	538.0	0	N/A	N/A
structural_annotation	UHGV-0169983_40	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_41	phrog_13908	147.1	1.20512e-43	N/A	unknown function
eggNOG-mapper	UHGV-0169983_41	1410650.JHWL01000003_gene2831	106.0	5.12e-24	N/A	N/A
PHROG	UHGV-0169983_42	phrog_1357	217.0	0	major head protein	head and packaging
UniRef90	UHGV-0169983_42	UniRef90_A0A2V2CFL5	397.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0169983_42	1410650.JHWL01000003_gene2830	275.0	0	N/A	N/A
Pfam	UHGV-0169983_42	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0169983_42	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0169983_42	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_44	phrog_12105	124.3	6.4e-37	N/A	unknown function
eggNOG-mapper	UHGV-0169983_44	1226322.HMPREF1545_03850	65.1	0.00000000000929	N/A	N/A
UniRef90	UHGV-0169983_45	UniRef90_R5DCX9	189.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0169983_45	1410650.JHWL01000003_gene2815	137.0	7.19e-34	N/A	N/A
PHROG	UHGV-0169983_46	phrog_22978	128.9	1.8e-38	N/A	unknown function
eggNOG-mapper	UHGV-0169983_46	1232449.BAHV02000016_gene1805	421.0	0	N/A	N/A
Pfam	UHGV-0169983_46	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
PHROG	UHGV-0169983_47	phrog_33872	54.6	0.0000000000000022	N/A	unknown function
eggNOG-mapper	UHGV-0169983_47	693746.OBV_19740	60.5	0.0000000000977	N/A	N/A
structural_annotation	UHGV-0169983_48	PF18962,NF011773	N/A	N/A	N/A	N/A
KOfam	UHGV-0169983_49	K19719	167.3	0	COL2A; collagen type II alpha	N/A
PHROG	UHGV-0169983_49	phrog_819	137.7	0	tail protein	tail
eggNOG-mapper	UHGV-0169983_49	1232443.BAIA02000078_gene14	84.7	0.0000000000000188	nuclear chromosome segregation	N/A
Pfam	UHGV-0169983_49	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0169983_49	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
eggNOG-mapper	UHGV-0169983_50	742738.HMPREF9460_02534	60.5	0.000000114	N/A	N/A
Pfam	UHGV-0169983_50	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0169983_50	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0169983_52	1519439.JPJG01000060_gene1895	82.4	0.00000000000000182	N/A	N/A
structural_annotation	UHGV-0169983_52	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0169983_55	phrog_6918	75.4	6.2e-22	holin	lysis
UniRef90	UHGV-0169983_55	UniRef90_A0A316QCY7	92.0	2.02e-22	Holin	N/A
eggNOG-mapper	UHGV-0169983_55	1297617.JPJD01000020_gene301	90.5	1.41e-22	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0169983_55	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0169983_55	PF09682,TIGR01673	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0169983	Yes	40,798	59	100	1
UHGV-1424580	No	23,187	60	55	1
UHGV-1464479	No	21,523	61	51	1
UHGV-1811271	No	15,943	61	38	1
UHGV-1776691	No	15,221	61	36	1
UHGV-1712574	No	10,572	62	25	1