vOTU vOTU-047056

vOTU: vOTU-047056

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-047056
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Christensenellales → QALW01 → UMGS1338 → UMGS1338 sp900550805
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-03955 → vGENUS-06287 → vSUBGEN-04261 → vOTU-047056
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → QALW01 → UMGS1338 → UMGS1338 sp900550805
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0189073
Biosample ID	SAMN09781713
Genome length (bp)	40,583 bps
CheckV completeness	100.00% (Complete)
CDS count	53
CDS density	94.11%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → QALW01 → UMGS1338 → UMGS1338 sp900550805	Total connections	39	Host agreement	87.18
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → QALW01 → UMGS1338 → UMGS1338 sp900550805	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0189073_1	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
COG	UHGV-0189073_1	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
PHROG	UHGV-0189073_2	phrog_2649	58.8	1.5e-16	endolysin	lysis
UniRef90	UHGV-0189073_2	UniRef90_A0A645A9U3	139.0	1.17e-33	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0189073_2	272558.10176295	71.2	0.000000000117	NlpC/P60 family	N/A
Pfam	UHGV-0189073_2	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0189073_2	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
PHROG	UHGV-0189073_3	phrog_372	169.4	0	tail protein	tail
UniRef90	UHGV-0189073_3	UniRef90_UPI001E5C78A4	147.0	1.37e-33	N/A	N/A
eggNOG-mapper	UHGV-0189073_3	877414.ATWA01000019_gene2053	68.9	0.00000000303	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0189073_3	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0189073_3	COG4675	N/A	N/A	Phage tail collar domain	N/A
eggNOG-mapper	UHGV-0189073_4	658659.HMPREF0983_03295	59.3	0.000000193	N/A	N/A
structural_annotation	UHGV-0189073_4	NF038340	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_5	phrog_511	169.1	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0189073_5	1410650.JHWL01000003_gene2827	312.0	0	N/A	N/A
structural_annotation	UHGV-0189073_5	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_6	phrog_12105	76.9	2.7e-22	N/A	unknown function
PHROG	UHGV-0189073_7	phrog_15239	59.1	6.2e-17	N/A	unknown function
PHROG	UHGV-0189073_8	phrog_1357	245.0	0	major head protein	head and packaging
UniRef90	UHGV-0189073_8	UniRef90_A0A1I0BH03	338.0	0	Major capsid protein, N4-gp56 family	N/A
eggNOG-mapper	UHGV-0189073_8	657322.FPR_02330	303.0	0	N/A	N/A
Pfam	UHGV-0189073_8	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0189073_8	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0189073_8	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_9	phrog_13908	264.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0189073_9	1410650.JHWL01000003_gene2831	117.0	4.48e-28	N/A	N/A
PHROG	UHGV-0189073_10	phrog_4478	47.7	0.00000000000022	peptidase	other
Pfam	UHGV-0189073_10	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0189073_10	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_11	phrog_156	384.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0189073_11	748224.HMPREF9436_01396	585.0	0	N/A	N/A
structural_annotation	UHGV-0189073_11	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0189073_12	K06909	118.7	6.5e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0189073_12	phrog_979	206.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0189073_12	UniRef90_UPI001EE1BE37	657.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0189073_12	748224.HMPREF9436_02548	657.0	0	Terminase-like family	N/A
Pfam	UHGV-0189073_12	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0189073_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0189073_12	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0189073_15	COG4451	N/A	N/A	N/A	N/A
KOfam	UHGV-0189073_16	K07726	42.6	0.000000000011	K07726; putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0189073_16	1410630.JNKP01000001_gene2069	53.1	0.0000000177	sequence-specific DNA binding	N/A
Pfam	UHGV-0189073_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0189073_16	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0189073_16	PF15731,NF007481,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0189073_17	K03111	91.5	1.6e-26	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0189073_17	phrog_44	101.8	9e-30	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189073_17	UniRef90_UPI001D067827	100.0	1.11e-24	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0189073_17	218495.SUB0136	95.9	1.53e-23	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0189073_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0189073_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0189073_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0189073_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0189073_17	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_18	phrog_190	114.6	8.2e-34	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189073_18	UniRef90_A0A843GYT1	138.0	1.44e-39	N/A	N/A
eggNOG-mapper	UHGV-0189073_18	1236514.BAKL01000051_gene3708	97.8	9.16e-25	N/A	N/A
Pfam	UHGV-0189073_18	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0189073_18	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_19	phrog_986	102.5	2.9e-30	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189073_19	UniRef90_A0A413DGU9	90.9	1.1e-21	N/A	N/A
eggNOG-mapper	UHGV-0189073_19	1582152.A0A0A8WI22_9CAUD	72.8	0.00000000000000601	N/A	N/A
Pfam	UHGV-0189073_19	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-0189073_19	PF12961,MF_00684,NF003443,COG4043	N/A	N/A	N/A	N/A
KOfam	UHGV-0189073_24	K00571	76.1	2.6e-22	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0189073_24	phrog_498	148.7	1.26117e-44	DNA methyltransferase	other
UniRef90	UHGV-0189073_24	UniRef90_A0A6H1ZVA0	189.0	0	Putative methyltransferase	N/A
eggNOG-mapper	UHGV-0189073_24	596323.HMPREF0554_0840	173.0	0	ParB-like nuclease domain	N/A
PADLOC	UHGV-0189073_24	MTase_II_00015	75.9	7.89996e-41	Type II methyltransferase	RM
Pfam	UHGV-0189073_24	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0189073_24	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0189073_24	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_26	phrog_757	224.4	0	DNA methyltransferase	other
UniRef90	UHGV-0189073_26	UniRef90_UPI001A9B5584	243.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0189073_26	1235790.C805_00032	240.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0189073_26	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0189073_26	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_28	phrog_2514	81.8	9.1e-24	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189073_28	UniRef90_A0A318KSV9	89.7	1.03e-18	DnaD/phage-associated family protein	N/A
eggNOG-mapper	UHGV-0189073_28	397291.C804_01603	104.0	5.67e-25	DnaD domain protein	N/A
COG	UHGV-0189073_28	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0189073_30	phrog_2113	48.6	0.00000000000011	N/A	unknown function
structural_annotation	UHGV-0189073_30	PF08220,TIGR00122,COG1654	N/A	N/A	N/A	N/A
KOfam	UHGV-0189073_31	K07455	165.1	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0189073_31	phrog_148	184.3	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189073_31	UniRef90_A0A2N6DJK3	238.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0189073_31	857293.CAAU_0781	230.0	0	RecT family	N/A
Pfam	UHGV-0189073_31	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0189073_31	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0189073_31	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0189073_31	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_32	phrog_434	316.8	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189073_32	UniRef90_A0A7X6XAG1	279.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0189073_32	857293.CAAU_0780	266.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0189073_32	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0189073_32	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0189073_32	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0189073_32	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_35	phrog_8	73.3	3.8e-40	transcriptional regulator	transcription regulation
UniRef90	UHGV-0189073_35	UniRef90_A0A0V8C4S1	91.7	1.57e-20	Transcriptional regulator Cro/CI family	N/A
eggNOG-mapper	UHGV-0189073_35	1123302.KB904185_gene810	95.1	4.09e-22	Helix-turn-helix domain	N/A
Pfam	UHGV-0189073_35	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0189073_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0189073_35	PF00717,PF12844,MF_00015,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189073_37	UniRef90_A0A1C6HD04	70.5	0.000000000000834	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0189073_37	411461.DORFOR_02407	57.0	0.000000125	Putative restriction endonuclease	N/A
Pfam	UHGV-0189073_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0189073_37	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-0189073_37	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0189073_39	K14059	187.5	0	int; integrase	N/A
PHROG	UHGV-0189073_39	phrog_1	167.7	0	integrase	integration and excision
UniRef90	UHGV-0189073_39	UniRef90_A0A316QG14	305.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0189073_39	742738.HMPREF9460_01344	202.0	0	Phage integrase family	N/A
Pfam	UHGV-0189073_39	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0189073_39	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0189073_39	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0189073_41	1408437.JNJN01000043_gene801	52.8	0.00000778	N/A	N/A
eggNOG-mapper	UHGV-0189073_42	1408437.JNJN01000043_gene802	105.0	1.33e-27	N/A	N/A
PHROG	UHGV-0189073_43	phrog_16490	97.6	8.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0189073_43	476272.RUMHYD_01770	128.0	7.18e-34	N/A	N/A
KOfam	UHGV-0189073_46	K07741	69.2	1.3e-19	antB; anti-repressor protein	N/A
PHROG	UHGV-0189073_46	phrog_130	207.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0189073_46	UniRef90_A0A6L6TNB8	284.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0189073_46	1289596.M1PKL6_9CAUD	233.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0189073_46	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0189073_46	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0189073_46	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189073_47	UniRef90_A0A413G573	85.5	6.99e-21	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0189073_47	469604.HMPREF0946_00961	74.7	2.25e-17	N/A	N/A
Pfam	UHGV-0189073_47	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0189073_47	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189073_50	UniRef90_A0A7X7WBI0	162.0	2.8026e-45	NlpC/P60 domain-containing protein	N/A
Pfam	UHGV-0189073_50	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0189073_50	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0189073_50	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
PHROG	UHGV-0189073_51	phrog_1129	51.5	0.000000000000012	holin	lysis
UniRef90	UHGV-0189073_51	UniRef90_A0A316QDA6	88.6	1.31e-20	Enolase	N/A
eggNOG-mapper	UHGV-0189073_51	411473.RUMCAL_01944	70.9	0.0000000000000101	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0189073_51	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0189073_51	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0189073_52	phrog_4105	56.3	6.2e-16	N/A	unknown function
PHROG	UHGV-0189073_53	phrog_22978	608.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0189073_53	1410650.JHWL01000003_gene2814	215.0	0	N/A	N/A
Pfam	UHGV-0189073_53	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0189073	Yes	40,583	54	100	1
UHGV-0173228	No	27,298	54	65	1