vOTU vOTU-047283

vOTU: vOTU-047283

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-047283
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-00184 → vGENUS-00321 → vSUBGEN-30157 → vOTU-047283
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0194647
Biosample ID	SAMN09781725
Genome length (bp)	40,450 bps
CheckV completeness	100.00% (Complete)
CDS count	59
CDS density	91.59%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	46	Host agreement	73.91
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0194647_1	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_2	phrog_1468	51.9	0.0000000000000075	transcriptional repressor	transcription regulation
UniRef90	UHGV-0194647_2	UniRef90_A0A3Q0NDY7	48.1	0.00000879	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0194647_2	386043.lwe1198	46.6	0.00000596	Helix-turn-helix	N/A
Pfam	UHGV-0194647_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0194647_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0194647_3	596152.DesU5LDRAFT_1910	97.8	1.31e-22	N/A	N/A
structural_annotation	UHGV-0194647_3	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194647_4	1033743.CAES01000078_gene3736	56.2	0.000000287	Flagellar Assembly Protein A	N/A
COG	UHGV-0194647_4	COG1315	N/A	N/A	Flagellar assembly protein FapA, interacts with EIIAGlc	N/A
structural_annotation	UHGV-0194647_4	COG1664	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_6	phrog_4973	69.3	4.8e-20	N/A	unknown function
UniRef90	UHGV-0194647_6	UniRef90_UPI001D0904CC	80.1	2.69e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0194647_6	1072685.IX83_07155	58.2	0.000000000155	Helix-turn-helix domain	N/A
Pfam	UHGV-0194647_6	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0194647_6	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_9	phrog_155	155.6	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0194647_9	UniRef90_UPI00130EB09C	186.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0194647_9	748224.HMPREF9436_03360	171.0	0	ERF superfamily	N/A
Pfam	UHGV-0194647_9	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0194647_9	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_10	phrog_72	70.2	2.6e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0194647_10	UniRef90_A0A8D9PDS2	164.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0194647_10	445972.ANACOL_01825	163.0	0	N/A	N/A
structural_annotation	UHGV-0194647_10	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_11	phrog_7370	62.7	4.9e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0194647_11	UniRef90_A0A3D1LDS4	150.0	1.4013e-45	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0194647_11	1235800.C819_02254	69.3	0.0000000000000907	HNH nucleases	N/A
Pfam	UHGV-0194647_11	PF01844	N/A	N/A	HNH endonuclease	HNH
KOfam	UHGV-0194647_13	K03111	131.3	1.2e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0194647_13	phrog_44	132.5	3.1e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0194647_13	UniRef90_UPI001C02B0E9	186.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0194647_13	693746.OBV_12860	170.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0194647_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0194647_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0194647_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0194647_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0194647_13	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_14	phrog_15768	49.8	0.000000000000063	N/A	unknown function
UniRef90	UHGV-0194647_14	UniRef90_A0A7C1PUJ6	99.4	5.64e-22	N/A	N/A
COG	UHGV-0194647_14	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0194647_14	PF07120,COG3756	N/A	N/A	N/A	N/A
KOfam	UHGV-0194647_18	K00558	139.9	8.96831e-44	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0194647_18	phrog_363	234.7	0	DNA methyltransferase	other
UniRef90	UHGV-0194647_18	UniRef90_UPI00082E0CBC	363.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0194647_18	693746.OBV_01900	276.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0194647_18	MTase_II_00058	120.9	1.6e-35	Type II methyltransferase	RM
Pfam	UHGV-0194647_18	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0194647_18	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0194647_18	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0194647_18	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_20	phrog_924	43.4	0.0000000000011	N/A	unknown function
UniRef90	UHGV-0194647_20	UniRef90_A0A417H740	157.0	0	N/A	N/A
Pfam	UHGV-0194647_20	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0194647_21	phrog_3136	126.3	1.2e-37	N/A	unknown function
UniRef90	UHGV-0194647_21	UniRef90_A0A3D0HBD2	108.0	5.6e-27	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0194647_21	1235793.C809_02645	66.6	0.0000000000416	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0194647_21	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0194647_21	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0194647_21	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194647_22	665956.HMPREF1032_03087	63.5	0.000000000117	N/A	N/A
UniRef90	UHGV-0194647_25	UniRef90_UPI0019D1E2CF	255.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0194647_25	1410632.JHWW01000006_gene695	195.0	0	N/A	N/A
structural_annotation	UHGV-0194647_25	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_26	phrog_1770	53.1	0.000000000000006	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0194647_26	536233.CLO_1822	134.0	1.14e-37	N/A	N/A
structural_annotation	UHGV-0194647_26	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_28	phrog_801	69.1	8.8e-20	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-0194647_28	UniRef90_A0A2U1BC09	97.8	2.08e-24	N/A	N/A
eggNOG-mapper	UHGV-0194647_28	1366055.S5MLS6_9CAUD	65.5	0.000000000014	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-0194647_28	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0194647_28	PF18909	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0194647_29	PF17917	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_31	phrog_15863	160.5	0	N/A	unknown function
UniRef90	UHGV-0194647_31	UniRef90_A0A1Y3R3M0	233.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0194647_31	693746.OBV_01780	172.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0194647_31	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
PHROG	UHGV-0194647_32	phrog_13890	80.1	1.5e-23	N/A	unknown function
UniRef90	UHGV-0194647_32	UniRef90_A0A6N3FVH7	87.8	1.06e-21	Arc domain-containing protein	N/A
eggNOG-mapper	UHGV-0194647_32	657322.FPR_28500	59.3	0.0000000000574	N/A	N/A
Pfam	UHGV-0194647_32	PF05534	N/A	N/A	HicB family	HicB
structural_annotation	UHGV-0194647_32	PF10723,NF010256,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_33	phrog_33872	61.5	1.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0194647_34	1235802.C823_02864	64.7	0.000000000000132	N/A	N/A
KOfam	UHGV-0194647_36	K06909	142.4	3.80032e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0194647_36	phrog_979	122.4	8e-38	terminase large subunit	head and packaging
UniRef90	UHGV-0194647_36	UniRef90_G4KR97	540.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0194647_36	693746.OBV_01690	540.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0194647_36	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0194647_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0194647_36	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194647_37	693746.OBV_01730	74.3	0.00000000000000399	N/A	N/A
structural_annotation	UHGV-0194647_37	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_38	phrog_14606	41.8	0.00000000001	N/A	unknown function
eggNOG-mapper	UHGV-0194647_38	755731.Clo1100_2435	68.9	0.000000000146	N/A	N/A
PHROG	UHGV-0194647_39	phrog_422	151.8	4.2039e-45	major head protein	head and packaging
UniRef90	UHGV-0194647_39	UniRef90_A0A6A8VJ17	330.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0194647_39	1408437.JNJN01000001_gene1710	241.0	0	N/A	N/A
Pfam	UHGV-0194647_39	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0194647_39	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_40	phrog_3287	41.4	0.00000000000084	virion structural protein	head and packaging
UniRef90	UHGV-0194647_40	UniRef90_A0A4D7ASB8	506.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194647_40	693746.OBV_01680	498.0	0	N/A	N/A
structural_annotation	UHGV-0194647_40	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_42	phrog_156	134.5	4.39999e-40	portal protein	head and packaging
eggNOG-mapper	UHGV-0194647_42	693746.OBV_01670	599.0	0	N/A	N/A
structural_annotation	UHGV-0194647_42	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194647_43	1408437.JNJN01000028_gene1366	66.2	0.00000000123	N/A	N/A
UniRef90	UHGV-0194647_44	UniRef90_R5IRZ6	149.0	2.65e-40	N/A	N/A
eggNOG-mapper	UHGV-0194647_44	1519439.JPJG01000060_gene1894	151.0	2.1594e-42	N/A	N/A
Pfam	UHGV-0194647_44	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0194647_44	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0194647_44	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194647_46	1235797.C816_04174	127.0	9.07e-35	N/A	N/A
eggNOG-mapper	UHGV-0194647_47	693746.OBV_01600	85.5	0.00000000000000247	N/A	N/A
eggNOG-mapper	UHGV-0194647_48	1408437.JNJN01000060_gene452	375.0	0	heme binding	N/A
COG	UHGV-0194647_48	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
PHROG	UHGV-0194647_49	phrog_937	59.4	7.2e-17	hemolysin	other
eggNOG-mapper	UHGV-0194647_49	1519439.JPJG01000023_gene533	50.8	0.000000735	N/A	N/A
PHROG	UHGV-0194647_50	phrog_443	62.4	1.2e-17	holin	lysis
UniRef90	UHGV-0194647_50	UniRef90_UPI0009B98E42	94.4	4.11e-24	holin	N/A
eggNOG-mapper	UHGV-0194647_50	1235797.C816_04172	89.4	6.29e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0194647_50	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0194647_50	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0194647_51	phrog_14030	135.1	4.39999e-40	N/A	unknown function
UniRef90	UHGV-0194647_51	UniRef90_UPI00164AB959	161.0	2.8026e-45	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0194647_51	1095750.HMPREF9970_2291	151.0	6.00036e-42	repeat protein	N/A
COG	UHGV-0194647_51	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-0194647_52	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194647_55	1378168.N510_03079	58.9	0.000000031	N/A	N/A
KOfam	UHGV-0194647_56	K14059	102.9	4.8e-30	int; integrase	N/A
PHROG	UHGV-0194647_56	phrog_1	100.8	1.6e-29	integrase	integration and excision
UniRef90	UHGV-0194647_56	UniRef90_A0A6L5YHU4	228.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0194647_56	478749.BRYFOR_05407	202.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0194647_56	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0194647_56	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0194647_56	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0194647_57	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0194647_59	NF007257,COG1396	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0194647	Yes	40,450	53	100	1
UHGV-0180325	No	40,759	54	100	1
UHGV-0178809	No	35,960	53	89	1