vOTU vOTU-047373

vOTU: vOTU-047373

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-047373
Number of genomes	3
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01289 → vGENUS-05165 → vSUBGEN-28994 → vOTU-047373
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Lawsonibacter → Lawsonibacter sp902363045
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0197525
Biosample ID	SAMN05826989
Genome length (bp)	41,637 bps
CheckV completeness	100.00% (Complete)
CDS count	51
CDS density	93.64%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Lawsonibacter → Lawsonibacter sp902363045	Total connections	1	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0197525_1	K01448	120.9	1.4e-35	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0197525_1	phrog_435	120.1	2.1e-35	endolysin	lysis
UniRef90	UHGV-0197525_1	UniRef90_UPI001E4F8FA2	80.5	0.000000000000194	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0197525_1	1410668.JNKC01000001_gene1675	159.0	2.2701e-42	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0197525_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0197525_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0197525_1	PF01520,PF09992,MF_00562,TIGR02883,COG0860,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_3	phrog_1129	69.1	4.1e-20	holin	lysis
UniRef90	UHGV-0197525_3	UniRef90_A0A416QZD1	132.0	9.44e-39	Enolase	N/A
eggNOG-mapper	UHGV-0197525_3	1007096.BAGW01000036_gene2663	131.0	5.58e-39	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0197525_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0197525_3	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_4	phrog_4105	62.6	6.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0197525_4	1687.BCOR_0969	58.5	0.000000000893	N/A	N/A
eggNOG-mapper	UHGV-0197525_6	1321774.HMPREF9108_00995	63.9	0.0000000000797	N/A	N/A
PHROG	UHGV-0197525_7	phrog_10390	153.4	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0197525_7	UniRef90_A0A415Z633	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-0197525_7	679192.HMPREF9013_1310	189.0	0	N/A	N/A
Pfam	UHGV-0197525_7	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0197525_7	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197525_7	PF13274,COG3600	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0197525_8	693746.OBV_01590	482.0	0	N/A	N/A
Pfam	UHGV-0197525_8	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
Pfam	UHGV-0197525_8	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
eggNOG-mapper	UHGV-0197525_9	1226322.HMPREF1545_00786	138.0	9.52e-34	N/A	N/A
PHROG	UHGV-0197525_10	phrog_511	181.5	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0197525_10	1519439.JPJG01000060_gene1903	440.0	0	N/A	N/A
structural_annotation	UHGV-0197525_10	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_12	phrog_7121	112.8	1.9e-33	tail fiber protein	tail
UniRef90	UHGV-0197525_12	UniRef90_UPI00195E70AD	244.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0197525_12	1226322.HMPREF1545_00783	92.4	1.88e-17	Chaperone of endosialidase	N/A
Pfam	UHGV-0197525_12	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0197525_12	PF07902,NF041249	N/A	N/A	N/A	N/A
KOfam	UHGV-0197525_14	K19721	213.4	0	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0197525_14	phrog_819	140.2	0	tail protein	tail
eggNOG-mapper	UHGV-0197525_14	1203606.HMPREF1526_02029	71.6	0.000000000364	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0197525_14	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0197525_14	COG1409	N/A	N/A	3',5'-cyclic AMP phosphodiesterase CpdA	N/A
PHROG	UHGV-0197525_16	phrog_15239	115.0	2.8e-34	N/A	unknown function
eggNOG-mapper	UHGV-0197525_16	1449126.JQKL01000003_gene1694	51.2	0.00000355	N/A	N/A
PHROG	UHGV-0197525_17	phrog_1357	294.3	0	major head protein	head and packaging
UniRef90	UHGV-0197525_17	UniRef90_A0A1Y4WLZ7	577.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0197525_17	1203606.HMPREF1526_02746	419.0	0	N/A	N/A
Pfam	UHGV-0197525_17	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0197525_17	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0197525_17	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_18	phrog_13908	372.2	0	N/A	unknown function
UniRef90	UHGV-0197525_18	UniRef90_A0A174CZ20	101.0	1.99e-20	Predicted ribosomal protein	N/A
eggNOG-mapper	UHGV-0197525_18	1410650.JHWL01000003_gene2831	128.0	7.81e-32	N/A	N/A
UniRef90	UHGV-0197525_19	UniRef90_UPI001D021C93	92.0	3.28e-22	ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-0197525_19	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0197525_19	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_20	phrog_156	330.8	0	portal protein	head and packaging
UniRef90	UHGV-0197525_20	UniRef90_A0A8D9UH10	830.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0197525_20	748224.HMPREF9436_01396	526.0	0	N/A	N/A
structural_annotation	UHGV-0197525_20	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0197525_21	K06909	123.3	2.2e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0197525_21	phrog_979	203.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0197525_21	UniRef90_UPI001D0245C4	848.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0197525_21	411483.FAEPRAA2165_01044	665.0	0	Terminase-like family	N/A
Pfam	UHGV-0197525_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0197525_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0197525_21	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_22	phrog_309	143.5	7.39886e-43	terminase small subunit	head and packaging
UniRef90	UHGV-0197525_22	UniRef90_UPI00100A781C	152.0	2.52234e-44	transposase	N/A
eggNOG-mapper	UHGV-0197525_22	1567014.A0A0A7RTX1_9VIRU	147.0	3.76949e-43	N/A	N/A
structural_annotation	UHGV-0197525_22	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_27	phrog_2245	52.7	0.0000000000000064	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0197525_27	318464.IO99_07375	84.3	1.06e-18	N/A	N/A
PHROG	UHGV-0197525_29	phrog_38832	64.2	1.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0197525_29	445972.ANACOL_00165	53.5	0.00000289	N/A	N/A
structural_annotation	UHGV-0197525_29	PF11717,TIGR02450	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197525_30	UniRef90_UPI001958DC75	89.0	6.89e-21	N/A	N/A
eggNOG-mapper	UHGV-0197525_30	665950.HMPREF1025_02540	67.0	0.00000000000713	N/A	N/A
structural_annotation	UHGV-0197525_30	PF04448	N/A	N/A	N/A	N/A
KOfam	UHGV-0197525_31	K07741	61.0	4.2e-17	antB; anti-repressor protein	N/A
PHROG	UHGV-0197525_31	phrog_130	204.1	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0197525_31	UniRef90_UPI001898AF00	403.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0197525_31	445972.ANACOL_01862	274.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0197525_31	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0197525_31	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0197525_31	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0197525_31	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197525_33	UniRef90_UPI001ADDDCFE	64.7	0.00000000000149	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0197525_33	663952.SDD27957_09060	52.8	0.000000012	N/A	N/A
structural_annotation	UHGV-0197525_33	PF01402,NF041793,COG4453	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0197525_34	552398.HMPREF0866_03131	56.6	0.00000000046	N/A	N/A
structural_annotation	UHGV-0197525_36	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_37	phrog_2562	98.1	1.1e-28	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197525_37	UniRef90_A0A1C6D5S6	263.0	0	N/A	N/A
eggNOG-mapper	UHGV-0197525_37	1235790.C805_00030	171.0	0	N/A	N/A
Pfam	UHGV-0197525_37	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0197525_37	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0197525_38	phrog_1029	246.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0197525_38	552398.HMPREF0866_01625	261.0	0	N/A	N/A
structural_annotation	UHGV-0197525_38	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_39	phrog_997	114.7	4.9e-34	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197525_39	UniRef90_R6MCS9	105.0	4.56e-27	N/A	N/A
eggNOG-mapper	UHGV-0197525_39	1203606.HMPREF1526_01889	139.0	7.25999e-41	replication terminator protein, phage associated	N/A
KOfam	UHGV-0197525_40	K06167	68.6	7.7e-20	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0197525_40	phrog_392	185.3	0	metal-dependent hydrolase	other
UniRef90	UHGV-0197525_40	UniRef90_UPI00195A5026	303.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-0197525_40	1203606.HMPREF1526_00311	192.0	0	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0197525_40	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
dbAPIS	UHGV-0197525_40	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-0197525_40	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0197525_40	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_41	phrog_862	55.2	0.0000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0197525_41	1203606.HMPREF1526_00310	195.0	0	N/A	N/A
structural_annotation	UHGV-0197525_41	PF05037,COG2965	N/A	N/A	N/A	N/A
KOfam	UHGV-0197525_42	K19171	74.1	4.6e-22	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0197525_42	phrog_77	215.1	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197525_42	UniRef90_UPI001959E3D8	653.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0197525_42	1203606.HMPREF1526_00309	405.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0197525_42	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0197525_42	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0197525_42	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197525_45	PF13560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197525_46	UniRef90_UPI000F0633F9	78.6	1.58e-17	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0197525_46	693746.OBV_43260	65.1	0.000000000000571	N/A	N/A
UniRef90	UHGV-0197525_48	UniRef90_UPI000E31DAF9	92.8	2.39e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0197525_48	445974.CLORAM_02965	87.0	7.34e-22	N/A	N/A
structural_annotation	UHGV-0197525_48	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0197525_49	K01356	142.8	3.59994e-42	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0197525_49	phrog_4	112.0	6.6e-33	transcriptional repressor	transcription regulation
UniRef90	UHGV-0197525_49	UniRef90_A0A8J6J9S0	249.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0197525_49	561177.ANHYDRO_01377	170.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0197525_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0197525_49	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0197525_49	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0197525_49	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
PHROG	UHGV-0197525_50	phrog_2657	167.6	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0197525_50	UniRef90_A0A1C6B9J9	540.0	0	KilA-N domain	N/A
eggNOG-mapper	UHGV-0197525_50	428125.CLOLEP_01836	422.0	0	COG NOG08824 non supervised orthologous group	N/A
Pfam	UHGV-0197525_50	PF04383	N/A	N/A	KilA-N domain	KilA-N
structural_annotation	UHGV-0197525_50	PF04383,NF033622,COG3943	N/A	N/A	N/A	N/A
KOfam	UHGV-0197525_51	K14059	93.3	4e-27	int; integrase	N/A
PHROG	UHGV-0197525_51	phrog_1	122.7	3.8e-36	integrase	integration and excision
UniRef90	UHGV-0197525_51	UniRef90_UPI000F051A1D	552.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0197525_51	693746.OBV_43340	417.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0197525_51	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0197525_51	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0197525_51	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0197525_51	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0197525_51	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0197525	Yes	41,637	59	100	1
UHGV-1598618	No	18,217	57	43	1
UHGV-0140682	No	11,975	57	28	1