vOTU vOTU-047575

vOTU: vOTU-047575

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-047575
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00131 → vSUBGEN-00810 → vOTU-047575
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0202758
Biosample ID	N/A
Genome length (bp)	40,291 bps
CheckV completeness	100.00% (Complete)
CDS count	65
CDS density	92.23%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	355	Host agreement	99.15
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0202758_3	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202758_4	UniRef90_A0A2A7AM72	165.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0202758_4	1378168.N510_01712	65.1	0.0000000000409	N/A	N/A
structural_annotation	UHGV-0202758_4	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0202758_5	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0202758_11	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_14	phrog_14970	45.9	0.000000000001	N/A	unknown function
COG	UHGV-0202758_14	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0202758_14	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_15	phrog_72	43.9	0.0000000000038	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0202758_15	411471.SUBVAR_05829	136.0	4.16e-38	N/A	N/A
structural_annotation	UHGV-0202758_15	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_17	phrog_7566	86.8	1.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0202758_17	411471.SUBVAR_05830	105.0	3.19e-28	N/A	N/A
KOfam	UHGV-0202758_18	K03111	144.7	8.80015e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0202758_18	phrog_44	147.0	8.54792e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202758_18	UniRef90_D4K451	217.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0202758_18	748224.HMPREF9436_00638	218.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0202758_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0202758_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0202758_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0202758_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0202758_18	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_19	phrog_6969	51.3	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0202758_19	748224.HMPREF9436_00735	156.0	4.7504e-43	N/A	N/A
Pfam	UHGV-0202758_19	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-0202758_19	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-0202758_19	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0202758_19	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0202758_20	K03496	201.4	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0202758_20	phrog_164	149.8	1.82169e-44	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202758_20	UniRef90_A0A2A7B6H3	355.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0202758_20	411471.SUBVAR_05839	226.0	0	AAA domain	N/A
Pfam	UHGV-0202758_20	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0202758_20	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0202758_20	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202758_21	UniRef90_A0A845R8R0	100.0	8.13e-25	N/A	N/A
KOfam	UHGV-0202758_22	K03497	91.9	1.2e-26	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0202758_22	phrog_4715	117.9	9.3e-35	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202758_22	UniRef90_A0A2A7AMC5	291.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0202758_22	411471.SUBVAR_05842	182.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0202758_22	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0202758_22	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0202758_22	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0202758_23	PF04545	N/A	N/A	N/A	N/A
COG	UHGV-0202758_28	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
KOfam	UHGV-0202758_29	K03427	111.3	9.4e-33	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0202758_29	phrog_6380	230.4	0	DNA methyltransferase	other
UniRef90	UHGV-0202758_29	UniRef90_UPI0011DC86C4	432.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0202758_29	1095750.HMPREF9970_0172	249.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
PADLOC	UHGV-0202758_29	MTase_I_00005	79.4	3.6e-23	Type I methyltransferase	RM
Pfam	UHGV-0202758_29	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0202758_29	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0202758_29	PF02384,TIGR00497,COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_30	phrog_119	58.4	1e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202758_30	UniRef90_A0A2A7B6I3	226.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0202758_30	610130.Closa_0739	104.0	1.46e-27	HNH nucleases	N/A
Pfam	UHGV-0202758_30	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0202758_30	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0202758_31	phrog_13845	53.9	0.0000000000000022	N/A	unknown function
eggNOG-mapper	UHGV-0202758_31	1399942.U3PDR2_9CAUD	63.5	0.0000000000252	N/A	N/A
structural_annotation	UHGV-0202758_31	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_32	phrog_9	244.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0202758_32	UniRef90_A0A2A7ALT4	1055.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0202758_32	1235792.C808_00083	637.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0202758_32	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0202758_32	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0202758_32	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_33	phrog_12	125.5	3.7e-37	portal protein	head and packaging
UniRef90	UHGV-0202758_33	UniRef90_A0A2A7B6S8	558.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0202758_33	349161.Dred_2606	261.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0202758_33	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0202758_33	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0202758_33	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0202758_33	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0202758_34	K01358	72.2	9.2e-21	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0202758_34	phrog_94	127.2	1.8e-37	head maturation protease	head and packaging
UniRef90	UHGV-0202758_34	UniRef90_UPI00111E41DA	134.0	3.34e-35	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0202758_34	1232452.BAIB02000007_gene1626	125.0	1.35e-32	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0202758_34	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0202758_34	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0202758_34	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_35	phrog_10	132.2	5.6e-39	major head protein	head and packaging
UniRef90	UHGV-0202758_35	UniRef90_A0A2A7B712	721.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0202758_35	1235792.C808_00086	438.0	0	Phage capsid family	N/A
Pfam	UHGV-0202758_35	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0202758_35	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0202758_35	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0202758_35	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0202758_35	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_36	phrog_749	59.7	4.3e-17	N/A	unknown function
UniRef90	UHGV-0202758_36	UniRef90_A0A371IJS1	50.1	0.00000879	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0202758_36	1211817.CCAT010000053_gene2133	67.0	0.000000000000493	N/A	N/A
PHROG	UHGV-0202758_37	phrog_19734	96.8	1.9e-28	N/A	unknown function
UniRef90	UHGV-0202758_37	UniRef90_A0A0D8I708	81.6	2.51e-17	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0202758_37	349161.Dred_2602	76.6	3.68e-16	N/A	N/A
structural_annotation	UHGV-0202758_37	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0202758_38	999413.HMPREF1094_02005	70.5	0.000000000000025	N/A	N/A
structural_annotation	UHGV-0202758_38	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_39	phrog_5	49.6	0.00000000000004	tail completion or Neck1 protein	connector
UniRef90	UHGV-0202758_39	UniRef90_A0A1C6FG30	115.0	1.94e-29	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0202758_39	908340.HMPREF9406_2573	110.0	1.76e-28	N/A	N/A
structural_annotation	UHGV-0202758_39	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_40	phrog_88	94.3	1.3e-27	major tail protein	tail
UniRef90	UHGV-0202758_40	UniRef90_G9YSC5	110.0	5.74e-27	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0202758_40	33035.JPJF01000039_gene278	73.2	0.000000000000279	N/A	N/A
NCBIFam	UHGV-0202758_40	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0202758_40	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_43	phrog_9959	87.8	1.2e-26	tail length tape measure protein	tail
UniRef90	UHGV-0202758_43	UniRef90_A0A2A7ALS3	895.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0202758_43	596328.HMPREF0578_1241	158.0	1.18e-36	phage tail tape measure protein	N/A
Pfam	UHGV-0202758_43	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0202758_43	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0202758_43	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0202758_43	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_44	phrog_33	74.4	2.4e-21	distal tail protein Dit	tail
UniRef90	UHGV-0202758_44	UniRef90_A0A173Z1X4	138.0	8.54e-37	Phage-related protein	N/A
eggNOG-mapper	UHGV-0202758_44	1487921.DP68_11370	85.1	3.74e-17	tail component	N/A
NCBIFam	UHGV-0202758_44	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0202758_44	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0202758_44	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_45	phrog_1067	173.0	0	minor head protein	head and packaging
UniRef90	UHGV-0202758_45	UniRef90_A0A2A7AM44	708.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0202758_45	1123263.AUKY01000068_gene489	189.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0202758_45	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0202758_45	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0202758_45	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0202758_45	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_47	phrog_13589	44.0	0.000000000001	N/A	unknown function
structural_annotation	UHGV-0202758_47	PF10651,NF010435	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_48	phrog_19280	76.6	1.9e-22	N/A	unknown function
UniRef90	UHGV-0202758_48	UniRef90_A0A844DHL3	735.0	0	N/A	N/A
eggNOG-mapper	UHGV-0202758_48	1160721.RBI_I01569	135.0	1.23e-32	N/A	N/A
Pfam	UHGV-0202758_48	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0202758_48	PF19789	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202758_50	UniRef90_A0A844DDG4	53.1	0.0000000269	XkdX family protein	N/A
eggNOG-mapper	UHGV-0202758_50	697281.Mahau_0596	46.6	0.00000156	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0202758_50	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0202758_50	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-0202758_51	K07273	165.5	0	acm; lysozyme	N/A
PHROG	UHGV-0202758_51	phrog_291	129.6	2.8e-38	endolysin	lysis
UniRef90	UHGV-0202758_51	UniRef90_UPI001D0EE7D8	309.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0202758_51	748224.HMPREF9436_00154	288.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0202758_51	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0202758_51	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0202758_51	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_53	phrog_15303	77.2	1.6e-22	N/A	unknown function
structural_annotation	UHGV-0202758_54	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0202758_57	phrog_16490	102.1	2.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-0202758_57	1408437.JNJN01000043_gene803	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-0202758_58	1408437.JNJN01000043_gene802	121.0	4.52e-34	N/A	N/A
eggNOG-mapper	UHGV-0202758_59	1408437.JNJN01000043_gene801	99.0	5.85e-23	N/A	N/A
KOfam	UHGV-0202758_60	K14059	183.0	0	int; integrase	N/A
PHROG	UHGV-0202758_60	phrog_1	166.9	0	integrase	integration and excision
UniRef90	UHGV-0202758_60	UniRef90_A0A367GI93	225.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0202758_60	1507.HMPREF0262_00307	161.0	2.53635e-43	Phage integrase family	N/A
Pfam	UHGV-0202758_60	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0202758_60	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0202758_60	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0202758_61	K07729	40.1	0.000000000047	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0202758_61	phrog_1373	43.1	0.000000000003	transcriptional regulator	transcription regulation
UniRef90	UHGV-0202758_61	UniRef90_A0A2A7B6N3	191.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0202758_61	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0202758_61	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0202758_61	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0202758_64	K02342	81.3	1.1e-23	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0202758_64	phrog_192	93.2	2.4e-27	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202758_64	UniRef90_UPI00131AB2F1	79.7	0.00000000000054	transposase	N/A
eggNOG-mapper	UHGV-0202758_64	665956.HMPREF1032_02791	124.0	7.81e-29	N/A	N/A
PADLOC	UHGV-0202758_64	cd06127	74.5	2.9e-21	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0202758_64	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0202758_64	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0202758_64	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0202758_64	PF13361,PF00533,MF_00157,NF008746,COG2925	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0202758_65	PF06776,COG5342	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0202758	Yes	40,291	53	100	1
UHGV-0124340	No	40,325	53	98	1