vOTU vOTU-047597

vOTU: vOTU-047597

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-047597
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00213 → vGENUS-04811 → vSUBGEN-26515 → vOTU-047597
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0202992
Biosample ID	N/A
Genome length (bp)	41,610 bps
CheckV completeness	100.00% (Complete)
CDS count	64
CDS density	94.51%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	65	Host agreement	87.69
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0202992_2	UniRef90_A0A098GES5	97.1	2.98e-24	Putative phage associated protein	N/A
structural_annotation	UHGV-0202992_2	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0202992_3	PF19885	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_4	phrog_190	107.6	9.9e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202992_4	UniRef90_A0A8D9PDD6	249.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0202992_4	1226322.HMPREF1545_00295	114.0	2.22e-30	N/A	N/A
Pfam	UHGV-0202992_4	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0202992_4	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_6	phrog_9804	166.1	0	N/A	unknown function
UniRef90	UHGV-0202992_6	UniRef90_A0A3D1LDS2	201.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0202992_6	1121344.JHZO01000003_gene981	195.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0202992_6	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0202992_6	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_7	phrog_15768	93.7	2.3e-27	N/A	unknown function
UniRef90	UHGV-0202992_7	UniRef90_A0A417QFV0	139.0	5.73e-37	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0202992_7	203119.Cthe_2466	165.0	0	N/A	N/A
structural_annotation	UHGV-0202992_7	PF10771,NF041413,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0202992_10	K03111	121.1	1.4e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0202992_10	phrog_44	125.6	4e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202992_10	UniRef90_A0A8D9PDS7	176.0	0	Single strand binding protein	N/A
eggNOG-mapper	UHGV-0202992_10	552398.HMPREF0866_01635	125.0	5.1e-35	Single-strand binding protein family	N/A
Pfam	UHGV-0202992_10	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0202992_10	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0202992_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0202992_10	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0202992_10	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_11	phrog_7566	72.4	4.8e-21	N/A	unknown function
UniRef90	UHGV-0202992_11	UniRef90_A0A8D9UHC0	127.0	1.99e-36	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0202992_11	693746.OBV_24070	97.8	4.5e-25	N/A	N/A
PHROG	UHGV-0202992_12	phrog_72	56.6	2.6e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202992_12	UniRef90_A0A8D9PDS2	308.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0202992_12	445972.ANACOL_01825	124.0	1.04e-33	N/A	N/A
structural_annotation	UHGV-0202992_12	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_13	phrog_434	45.1	0.0000000000014	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202992_13	UniRef90_B0PAM4	158.0	1.4013e-45	YqaJ domain-containing protein	N/A
Pfam	UHGV-0202992_13	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
structural_annotation	UHGV-0202992_13	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202992_14	UniRef90_A0A845QLQ8	186.0	0	N/A	N/A
eggNOG-mapper	UHGV-0202992_14	33035.JPJF01000135_gene5082	122.0	5.93e-32	N/A	N/A
Pfam	UHGV-0202992_14	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0202992_14	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_16	phrog_2113	44.3	0.0000000000022	N/A	unknown function
UniRef90	UHGV-0202992_16	UniRef90_A0A8D9UH91	104.0	2.53e-26	HTH cro/C1-type domain-containing protein	N/A
PHROG	UHGV-0202992_18	phrog_22529	46.9	0.00000000000031	N/A	unknown function
UniRef90	UHGV-0202992_18	UniRef90_A0A8D9UHA1	214.0	0	3D containing protein	N/A
eggNOG-mapper	UHGV-0202992_18	411461.DORFOR_01578	62.4	0.00000000442	3D domain	N/A
Pfam	UHGV-0202992_18	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0202992_18	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0202992_18	COG3584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202992_23	UniRef90_A0A1Y4LC65	58.9	0.000000000474	Transcriptional regulator	N/A
Pfam	UHGV-0202992_23	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0202992_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0202992_23	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0202992_24	K22300	48.1	0.00000000000024	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0202992_24	phrog_3037	41.8	0.000000000015	transcriptional repressor	transcription regulation
UniRef90	UHGV-0202992_24	UniRef90_A0A8D9UHB1	71.6	0.0000000000000695	Repressor protein CI	N/A
Pfam	UHGV-0202992_24	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0202992_24	COG1309	N/A	N/A	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	N/A
structural_annotation	UHGV-0202992_24	PF13560,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_26	phrog_14556	41.9	0.0000000000088	N/A	unknown function
UniRef90	UHGV-0202992_26	UniRef90_A0A8D9PDV2	89.7	6.41e-22	DNA methyl phosphotriester repair domain protein	N/A
eggNOG-mapper	UHGV-0202992_26	477974.Daud_0706	66.6	0.00000000000608	PFAM copper amine oxidase domain protein	N/A
COG	UHGV-0202992_26	COG0103	N/A	N/A	Ribosomal protein S9	N/A
UniRef90	UHGV-0202992_27	UniRef90_A0A8D9UHA6	149.0	3.09967e-42	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0202992_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0202992_27	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0202992_27	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0202992_28	K14059	180.1	0	int; integrase	N/A
PHROG	UHGV-0202992_28	phrog_1	174.0	0	integrase	integration and excision
UniRef90	UHGV-0202992_28	UniRef90_A0A174HFN7	340.0	0	Site-specific tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0202992_28	742738.HMPREF9460_01344	215.0	0	Phage integrase family	N/A
Pfam	UHGV-0202992_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0202992_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0202992_28	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0202992_29	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_30	phrog_20016	198.2	0	N/A	unknown function
UniRef90	UHGV-0202992_30	UniRef90_A0A285PT46	192.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0202992_30	397290.C810_05214	171.0	0	N/A	N/A
structural_annotation	UHGV-0202992_30	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_31	phrog_16490	135.4	3.3e-40	N/A	unknown function
eggNOG-mapper	UHGV-0202992_31	1408437.JNJN01000043_gene803	178.0	0	N/A	N/A
PHROG	UHGV-0202992_32	phrog_22984	69.1	5.4e-20	N/A	unknown function
PHROG	UHGV-0202992_33	phrog_21718	87.9	9.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0202992_33	397290.C810_05210	85.9	1.81e-19	N/A	N/A
PHROG	UHGV-0202992_34	phrog_3754	93.7	1.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0202992_34	476272.RUMHYD_01764	150.0	2.8026e-45	N/A	N/A
UniRef90	UHGV-0202992_35	UniRef90_A0A8D9PDQ3	157.0	0	ECF sigma factor	N/A
structural_annotation	UHGV-0202992_35	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_36	phrog_22978	894.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0202992_36	1410650.JHWL01000003_gene2814	277.0	0	N/A	N/A
eggNOG-mapper	UHGV-0202992_37	1410650.JHWL01000003_gene2815	62.4	0.0000000731	N/A	N/A
UniRef90	UHGV-0202992_38	UniRef90_A0A8D9UGT1	106.0	4.48e-27	Sigma C capsid protein	N/A
PHROG	UHGV-0202992_39	phrog_511	228.0	0	internal virion protein	head and packaging
UniRef90	UHGV-0202992_39	UniRef90_A0A8D9UH72	843.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-0202992_39	1226322.HMPREF1545_00785	321.0	0	N/A	N/A
structural_annotation	UHGV-0202992_39	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_40	phrog_12105	97.1	6.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0202992_40	1519439.JPJG01000060_gene1891	61.2	0.000000000197	N/A	N/A
PHROG	UHGV-0202992_41	phrog_435	55.1	0.0000000000000015	endolysin	lysis
UniRef90	UHGV-0202992_41	UniRef90_A0A8D9PDX2	355.0	0	MurNAc-LAA protein	N/A
eggNOG-mapper	UHGV-0202992_41	428125.CLOLEP_01588	95.9	3.23e-21	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-0202992_41	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0202992_41	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_42	phrog_881	76.2	2.5e-22	holin	lysis
UniRef90	UHGV-0202992_42	UniRef90_A0A8D9PDR9	117.0	3.16e-33	Holin	N/A
eggNOG-mapper	UHGV-0202992_42	476272.RUMHYD_01966	71.6	0.00000000000000112	Putative phage holin Dp-1	N/A
Pfam	UHGV-0202992_42	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0202992_42	PF16938,COG3237	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_43	phrog_1863	57.9	8.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0202992_43	718252.FP2_04900	97.1	2.93e-25	N/A	N/A
structural_annotation	UHGV-0202992_44	PF21683	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202992_45	UniRef90_UPI0002D3E57A	72.0	0.00000000000264	C39 family peptidase	N/A
eggNOG-mapper	UHGV-0202992_45	1095770.CAHE01000070_gene977	72.0	0.000000000000443	Peptidase_C39 like family	N/A
structural_annotation	UHGV-0202992_45	PF05543,NF033920	N/A	N/A	N/A	N/A
Pfam	UHGV-0202992_46	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
NCBIFam	UHGV-0202992_46	TIGR02543.1	N/A	N/A	TIGR02543 family repeat protein	N/A
COG	UHGV-0202992_46	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
structural_annotation	UHGV-0202992_46	NF033189	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_48	phrog_15239	93.0	1.2e-27	N/A	unknown function
PHROG	UHGV-0202992_49	phrog_1357	267.2	0	major head protein	head and packaging
UniRef90	UHGV-0202992_49	UniRef90_A0A8D9UH64	617.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0202992_49	1449126.JQKL01000003_gene1695	400.0	0	N/A	N/A
Pfam	UHGV-0202992_49	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0202992_49	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0202992_49	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_50	phrog_13908	301.4	0	N/A	unknown function
UniRef90	UHGV-0202992_50	UniRef90_A0A174CZ20	110.0	7.02e-24	Predicted ribosomal protein	N/A
eggNOG-mapper	UHGV-0202992_50	1410650.JHWL01000003_gene2831	114.0	1.49e-26	N/A	N/A
UniRef90	UHGV-0202992_51	UniRef90_A0A8D9PDR6	120.0	7.71e-34	YsxB-like protein	N/A
structural_annotation	UHGV-0202992_51	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_52	phrog_156	336.3	0	portal protein	head and packaging
UniRef90	UHGV-0202992_52	UniRef90_A0A8D9UH10	1156.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0202992_52	748224.HMPREF9436_01396	535.0	0	N/A	N/A
structural_annotation	UHGV-0202992_52	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0202992_53	K06909	119.4	3.6e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0202992_53	phrog_979	198.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0202992_53	UniRef90_A0A8D9PDR5	976.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-0202992_53	657322.FPR_02290	622.0	0	Terminase-like family	N/A
Pfam	UHGV-0202992_53	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0202992_53	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0202992_53	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202992_54	UniRef90_A0A8D9PDT2	174.0	0	Brinker DNA-binding domain protein	N/A
eggNOG-mapper	UHGV-0202992_54	1226322.HMPREF1545_00042	142.0	5.31933e-42	N/A	N/A
structural_annotation	UHGV-0202992_54	PF13542	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0202992_56	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_59	phrog_38832	70.9	8.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0202992_59	1232443.BAIA02000078_gene48	127.0	6.02e-36	N/A	N/A
structural_annotation	UHGV-0202992_59	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0202992_61	phrog_757	182.8	0	DNA methyltransferase	other
UniRef90	UHGV-0202992_61	UniRef90_A0A3A6EPW1	278.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0202992_61	748224.HMPREF9436_03069	254.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0202992_61	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0202992_61	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0202992_63	K00390	53.7	2.9e-16	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0202992_63	phrog_424	119.3	3.1e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0202992_63	UniRef90_A0A1H7KWC5	326.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-0202992_63	1280696.ATVY01000096_gene1971	271.0	0	N/A	N/A
Pfam	UHGV-0202992_63	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0202992_63	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0202992_63	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202992_64	UniRef90_A0A844U3V8	57.0	0.000000523	Leucine-rich repeat protein	N/A
COG	UHGV-0202992_64	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0202992_64	PF13969	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0202992	Yes	41,610	58	100	1