vOTU vOTU-047599

vOTU: vOTU-047599

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-047599
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00017 → vSUBFAM-00424 → vGENUS-05483 → vSUBGEN-16617 → vOTU-047599
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter faecis
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0202996
Biosample ID	SAMN10407347
Genome length (bp)	58,901 bps
CheckV completeness	100.00% (Complete)
CDS count	84
CDS density	93.55%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter faecis	Total connections	18	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0202996_1	phrog_4372	428.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0202996_1	UniRef90_A0A3A9ITG5	843.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0202996_1	478749.BRYFOR_08513	472.0	0	Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-0202996_1	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0202996_1	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0202996_1	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0202996_1	PF20155,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202996_2	UniRef90_A0A3A9JBQ1	195.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0202996_2	742733.HMPREF9469_05021	200.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0202996_2	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0202996_2	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_3	phrog_4338	226.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0202996_3	1537917.JU82_06570	170.0	0	N/A	N/A
PHROG	UHGV-0202996_4	phrog_4282	160.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0202996_4	478749.BRYFOR_08517	133.0	1.1e-37	N/A	N/A
PHROG	UHGV-0202996_5	phrog_2645	342.3	0	major tail protein	tail
UniRef90	UHGV-0202996_5	UniRef90_A0A7X7CG90	281.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0202996_5	428125.CLOLEP_01415	263.0	0	N/A	N/A
structural_annotation	UHGV-0202996_5	PF06488,PF18207,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202996_6	UniRef90_A0A4D6E5Z3	85.9	1.3e-19	Tail terminator	N/A
eggNOG-mapper	UHGV-0202996_6	665956.HMPREF1032_00678	87.8	3.81e-21	N/A	N/A
structural_annotation	UHGV-0202996_6	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_7	phrog_4270	112.1	2.2e-33	N/A	unknown function
UniRef90	UHGV-0202996_7	UniRef90_D4P7D7	95.9	2.15e-23	Gp026	N/A
eggNOG-mapper	UHGV-0202996_7	665956.HMPREF1032_00677	103.0	1.77e-27	N/A	N/A
structural_annotation	UHGV-0202996_7	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
KOfam	UHGV-0202996_8	K06904	52.4	0.0000000000000086	N/A	N/A
PHROG	UHGV-0202996_8	phrog_3270	686.5	0	head maturation protease	head and packaging
UniRef90	UHGV-0202996_8	UniRef90_A0A2V2EP61	643.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0202996_8	691965.D4P7D6_9CAUD	484.0	0	peptidase activity	N/A
structural_annotation	UHGV-0202996_8	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_9	phrog_12	115.3	3.3e-34	portal protein	head and packaging
UniRef90	UHGV-0202996_9	UniRef90_A0A349YIV1	637.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0202996_9	411460.RUMTOR_01348	488.0	0	Phage portal protein	N/A
Pfam	UHGV-0202996_9	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0202996_9	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_11	phrog_4291	41.0	0.000000000012	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0202996_11	PF09486,TIGR04319,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_12	phrog_9	228.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0202996_12	UniRef90_A0A349YIV4	1058.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0202996_12	665956.HMPREF1032_00672	908.0	0	Phage Terminase	N/A
Pfam	UHGV-0202996_12	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0202996_12	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0202996_12	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0202996_12	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_14	phrog_4247	140.3	4.19969e-42	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0202996_14	428125.CLOLEP_01407	119.0	4.16e-33	N/A	N/A
PHROG	UHGV-0202996_15	phrog_4259	126.5	8.1e-38	N/A	unknown function
UniRef90	UHGV-0202996_15	UniRef90_D4P7B9	83.2	2.11e-18	Gp008	N/A
eggNOG-mapper	UHGV-0202996_15	411460.RUMTOR_01353	85.1	5.3e-20	N/A	N/A
PHROG	UHGV-0202996_16	phrog_4303	85.7	3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0202996_16	691965.D4P7L8_9CAUD	53.1	0.0000000889	N/A	N/A
PHROG	UHGV-0202996_17	phrog_4291	1199.4	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202996_17	UniRef90_A0A349YHZ6	1496.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0202996_17	665956.HMPREF1032_00665	861.0	0	Bacterial regulatory proteins, luxR family	N/A
Pfam	UHGV-0202996_17	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-0202996_17	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_18	phrog_3953	189.0	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202996_18	UniRef90_UPI0011CA75C9	264.0	0	N/A	N/A
eggNOG-mapper	UHGV-0202996_18	742733.HMPREF9469_05040	265.0	0	N/A	N/A
Pfam	UHGV-0202996_18	PF10926	N/A	N/A	N/A	DUF2800
structural_annotation	UHGV-0202996_18	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
UniRef90	UHGV-0202996_19	UniRef90_A0A6M3TA66	99.8	3.49e-25	Nuclease	N/A
eggNOG-mapper	UHGV-0202996_19	742740.HMPREF9474_02280	104.0	8.78e-28	N/A	N/A
structural_annotation	UHGV-0202996_19	PF01870,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_20	phrog_62	146.0	2.29813e-43	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202996_20	UniRef90_UPI001D08DE3D	491.0	0	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-0202996_20	665950.HMPREF1025_01961	488.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-0202996_20	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0202996_20	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_21	phrog_4787	150.3	5.60519e-45	single strand annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0202996_21	665950.HMPREF1025_01958	132.0	1.57e-37	N/A	N/A
structural_annotation	UHGV-0202996_21	PF21265,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-0202996_22	K02319	40.8	0.0000000000054	pol; DNA polymerase, archaea type [EC:2.7.7.7]	N/A
PHROG	UHGV-0202996_22	phrog_4210	1784.2	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0202996_22	UniRef90_A0A349YIA0	1763.0	0	DNA-directed DNA polymerase (Fragment)	N/A
eggNOG-mapper	UHGV-0202996_22	742740.HMPREF9474_02303	1330.0	0	N/A	N/A
Pfam	UHGV-0202996_22	PF19263	N/A	N/A	N/A	DUF5906
structural_annotation	UHGV-0202996_22	PF00136,PF05272,PF09250,MF_04100,MF_00016,NF005477,NF004420,COG3378,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_26	phrog_4678	122.6	2.4e-36	N/A	unknown function
eggNOG-mapper	UHGV-0202996_26	411460.RUMTOR_02033	122.0	1.68e-32	N/A	N/A
PHROG	UHGV-0202996_28	phrog_4695	61.9	1.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0202996_28	742733.HMPREF9469_05070	56.2	0.000000601	N/A	N/A
PHROG	UHGV-0202996_41	phrog_2245	54.2	0.0000000000000025	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0202996_41	UniRef90_A0A373NRP8	63.2	0.0000000000863	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0202996_41	478749.BRYFOR_08545	79.3	8.78e-18	N/A	N/A
structural_annotation	UHGV-0202996_41	PF12643,MF_01020,NF001610,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_42	phrog_2152	204.5	0	N/A	unknown function
UniRef90	UHGV-0202996_42	UniRef90_UPI00157010A4	142.0	1.23e-36	N/A	N/A
eggNOG-mapper	UHGV-0202996_42	411460.RUMTOR_02029	155.0	5.73972e-42	N/A	N/A
Pfam	UHGV-0202996_42	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0202996_42	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_44	phrog_1689	81.1	8.3e-24	nucleotide kinase	other
eggNOG-mapper	UHGV-0202996_44	157924.Q7Y4J5_9CAUD	85.9	6.58e-18	N/A	N/A
Pfam	UHGV-0202996_44	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-0202996_47	phrog_4079	185.1	0	N/A	unknown function
UniRef90	UHGV-0202996_47	UniRef90_D4P7H8	121.0	1.48e-30	Gp067	N/A
eggNOG-mapper	UHGV-0202996_47	691965.D4P7H8_9CAUD	121.0	2.48e-31	N/A	N/A
PHROG	UHGV-0202996_49	phrog_2152	161.2	0	N/A	unknown function
UniRef90	UHGV-0202996_49	UniRef90_UPI00156E0E4E	129.0	3.48e-32	N/A	N/A
eggNOG-mapper	UHGV-0202996_49	742740.HMPREF9474_02314	122.0	8.58e-31	N/A	N/A
Pfam	UHGV-0202996_49	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0202996_49	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_50	phrog_2152	155.0	0	N/A	unknown function
UniRef90	UHGV-0202996_50	UniRef90_UPI00156F7DE9	89.7	1.64e-17	N/A	N/A
eggNOG-mapper	UHGV-0202996_50	411460.RUMTOR_02020	95.9	1.46e-20	N/A	N/A
Pfam	UHGV-0202996_50	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0202996_50	PF19880	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0202996_59	PF01842,NF005233	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0202996_62	PF21662,NF041454,COG5420	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0202996_71	PF17853,MF_01450,NF011015,COG1993	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_72	phrog_881	87.1	9.9e-26	holin	lysis
UniRef90	UHGV-0202996_72	UniRef90_UPI001D0692FC	101.0	1.23e-26	phage holin	N/A
eggNOG-mapper	UHGV-0202996_72	742740.HMPREF9474_02251	108.0	3.4e-30	Putative phage holin Dp-1	N/A
Pfam	UHGV-0202996_72	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0202996_72	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_73	phrog_4105	109.3	1.5e-32	N/A	unknown function
UniRef90	UHGV-0202996_73	UniRef90_A0A8D9UHA9	122.0	9.21e-34	Holin protein	N/A
eggNOG-mapper	UHGV-0202996_73	742733.HMPREF9469_05011	148.0	5.60519e-45	N/A	N/A
eggNOG-mapper	UHGV-0202996_75	931626.Awo_c11420	100.0	4.13e-19	Listeria-Bacteroides repeat domain (List_Bact_rpt)	N/A
Pfam	UHGV-0202996_75	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0202996_75	COG3209	N/A	N/A	N/A	N/A
KOfam	UHGV-0202996_76	K17733	143.0	1.90016e-42	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0202996_76	phrog_2649	136.7	1.90001e-40	endolysin	lysis
UniRef90	UHGV-0202996_76	UniRef90_A0A3R6HLL1	181.0	0	M15 family peptidase	N/A
eggNOG-mapper	UHGV-0202996_76	742733.HMPREF9469_01368	141.0	1.03e-38	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0202996_76	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0202996_76	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0202996_77	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0202996_78	1232452.BAIB02000007_gene1607	70.9	0.0000000000000668	N/A	N/A
COG	UHGV-0202996_79	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0202996_80	phrog_1419	75.0	5.4e-22	tail protein	tail
PHROG	UHGV-0202996_81	phrog_2566	40.9	0.000000000032	N/A	unknown function
PHROG	UHGV-0202996_82	phrog_1067	233.0	0	minor head protein	head and packaging
UniRef90	UHGV-0202996_82	UniRef90_A0A374MYW6	224.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0202996_82	1123263.AUKY01000068_gene489	259.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0202996_82	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0202996_82	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-0202996_82	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0202996_82	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0202996_82	PF14594,PF13884,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_83	phrog_33	80.0	4.8e-23	distal tail protein Dit	tail
UniRef90	UHGV-0202996_83	UniRef90_A0A173Z1X4	276.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0202996_83	1160721.RBI_I01575	147.0	4.11996e-41	Phage tail protein	N/A
COG	UHGV-0202996_83	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0202996_83	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0202996_84	phrog_4372	90.6	5.5e-37	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0202996_84	1235793.C809_01928	59.7	0.0000067	nuclear chromosome segregation	N/A
COG	UHGV-0202996_84	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0202996	Yes	58,901	40	100	1
UHGV-0186660	No	58,873	40	98	1