vOTU vOTU-047620

vOTU: vOTU-047620

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-047620
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Anaeromassilibacillus → Anaeromassilibacillus sp001305115
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-05625 → vGENUS-12598 → vSUBGEN-19281 → vOTU-047620
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Anaeromassilibacillus → Anaeromassilibacillus sp001305115
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0203116
Biosample ID	N/A
Genome length (bp)	33,202 bps
CheckV completeness	100.00% (Complete)
CDS count	52
CDS density	91.29%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Anaeromassilibacillus → Anaeromassilibacillus sp001305115	Total connections	10	Host agreement	80
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Anaeromassilibacillus → Anaeromassilibacillus sp001305115	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0203116_1	K22300	52.7	0.00000000000001	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0203116_1	phrog_8	48.7	0.00000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-0203116_1	UniRef90_UPI00068157C7	154.0	1.4013e-45	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0203116_1	1235835.C814_03415	93.6	1.65e-22	helix-turn-helix	N/A
Pfam	UHGV-0203116_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0203116_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0203116_2	UniRef90_UPI000680BD27	117.0	3.38e-33	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0203116_2	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0203116_2	PF13560,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_3	phrog_8	50.2	0.000000000000055	transcriptional regulator	transcription regulation
UniRef90	UHGV-0203116_3	UniRef90_A0A4V3R9F0	111.0	1.42e-30	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0203116_3	97138.C820_00805	114.0	2.23e-31	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0203116_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0203116_3	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0203116_5	K23779	55.7	0.0000000000000013	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0203116_5	phrog_5823	47.9	0.00000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0203116_5	UniRef90_UPI00068099B2	97.4	2.39e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0203116_5	1226325.HMPREF1548_03113	63.2	0.00000000000461	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0203116_5	retron_type_VI_hth_cluster2_1	44.0	0.000000000006	N/A	Retron
Pfam	UHGV-0203116_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0203116_5	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0203116_9	UniRef90_R6GFI3	84.3	1.5e-19	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0203116_9	428125.CLOLEP_02009	73.2	6.24e-16	sequence-specific DNA binding	N/A
Pfam	UHGV-0203116_9	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0203116_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0203116_9	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_11	phrog_3584	182.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0203116_11	641107.CDLVIII_1314	157.0	2.66247e-44	N/A	N/A
structural_annotation	UHGV-0203116_11	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0203116_12	K03700	85.8	6.4e-25	recU; recombination protein U	N/A
PHROG	UHGV-0203116_12	phrog_843	164.6	0	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0203116_12	UniRef90_UPI00093D3F54	273.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0203116_12	1211817.CCAT010000012_gene2726	189.0	0	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-0203116_12	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-0203116_12	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-0203116_12	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_13	phrog_36	75.7	6.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0203116_13	UniRef90_A0A3D3FGT2	135.0	3.14e-38	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0203116_13	1120978.KB894081_gene99	84.0	1.25e-18	N/A	N/A
COG	UHGV-0203116_13	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0203116_13	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_15	phrog_309	168.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-0203116_15	UniRef90_A0A417T189	171.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0203116_15	742733.HMPREF9469_01828	153.0	1.4013e-45	transposase activity	N/A
COG	UHGV-0203116_15	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0203116_15	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0203116_16	K06909	369.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0203116_16	phrog_3717	137.3	8.60005e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0203116_16	UniRef90_A0A1Y4ES07	827.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0203116_16	411471.SUBVAR_06507	588.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0203116_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0203116_16	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0203116_16	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0203116_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0203116_16	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_18	phrog_533	172.4	0	portal protein	head and packaging
UniRef90	UHGV-0203116_18	UniRef90_A0A4R1QXX3	732.0	0	A118 family predicted phage portal protein	N/A
eggNOG-mapper	UHGV-0203116_18	693746.OBV_18040	386.0	0	N/A	N/A
structural_annotation	UHGV-0203116_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_19	phrog_581	239.8	0	minor head protein	head and packaging
UniRef90	UHGV-0203116_19	UniRef90_UPI0006814CA4	604.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0203116_19	693746.OBV_18050	551.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0203116_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0203116_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0203116_19	PF06152,PF12636	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0203116_20	663278.Ethha_0092	80.5	2.79e-19	N/A	N/A
PHROG	UHGV-0203116_22	phrog_194	93.7	2.4e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-0203116_22	UniRef90_UPI000682EB3D	248.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0203116_22	693746.OBV_18080	213.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0203116_22	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0203116_22	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_23	phrog_422	237.7	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0203116_23	693746.OBV_18090	418.0	0	N/A	N/A
structural_annotation	UHGV-0203116_23	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_25	phrog_541	51.9	0.000000000000012	head-tail adaptor	connector
eggNOG-mapper	UHGV-0203116_25	693746.OBV_18110	136.0	3.32e-40	N/A	N/A
structural_annotation	UHGV-0203116_26	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_27	phrog_556	57.5	2.4e-16	minor head protein	head and packaging
UniRef90	UHGV-0203116_27	UniRef90_A0A4R1QRE8	178.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0203116_27	1449050.JNLE01000003_gene3886	76.6	7.88e-16	N/A	N/A
Pfam	UHGV-0203116_27	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0203116_27	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_28	phrog_3266	57.4	2.4e-16	tail completion	connector
eggNOG-mapper	UHGV-0203116_28	693746.OBV_18140	197.0	0	N/A	N/A
structural_annotation	UHGV-0203116_28	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_29	phrog_3099	154.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0203116_29	411471.SUBVAR_06936	228.0	0	N/A	N/A
structural_annotation	UHGV-0203116_29	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_30	phrog_11299	100.1	1.9e-29	N/A	unknown function
UniRef90	UHGV-0203116_30	UniRef90_UPI001C03A209	110.0	3.87e-28	V-type proton ATPase subunit E	N/A
eggNOG-mapper	UHGV-0203116_30	1226322.HMPREF1545_00057	122.0	9.55e-34	N/A	N/A
PHROG	UHGV-0203116_31	phrog_706	127.2	1.1e-37	N/A	unknown function
UniRef90	UHGV-0203116_31	UniRef90_UPI000A1C987E	310.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0203116_31	1226322.HMPREF1545_00058	219.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0203116_31	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0203116_31	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_32	phrog_806	101.7	6.9e-30	N/A	unknown function
UniRef90	UHGV-0203116_32	UniRef90_A0A1Y4EW04	421.0	0	N/A	N/A
eggNOG-mapper	UHGV-0203116_32	999411.HMPREF1092_01065	130.0	3.85e-35	N/A	N/A
Pfam	UHGV-0203116_32	PF11611	N/A	N/A	N/A	DUF4352
UniRef90	UHGV-0203116_33	UniRef90_UPI000A1CB5D4	156.0	0	zinc ribbon domain-containing protein	N/A
PHROG	UHGV-0203116_34	phrog_1535	182.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0203116_34	UniRef90_R6TDK7	233.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0203116_34	1120746.CCNL01000014_gene2105	357.0	0	tape measure	N/A
COG	UHGV-0203116_34	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_35	phrog_1194	104.7	5.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0203116_35	1229517.AMFD01000023_gene1305	80.5	7.62e-18	N/A	N/A
Pfam	UHGV-0203116_35	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0203116_35	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_36	phrog_6616	303.9	0	tail protein	tail
UniRef90	UHGV-0203116_36	UniRef90_UPI00085BC306	197.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0203116_36	1121866.AUGK01000003_gene1439	152.0	4.79e-36	Phage minor structural protein	N/A
COG	UHGV-0203116_36	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0203116_36	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0203116_37	phrog_19280	47.5	0.000000000000046	N/A	unknown function
UniRef90	UHGV-0203116_37	UniRef90_A0A1Y4ERW2	492.0	0	BppU_N domain-containing protein	N/A
Pfam	UHGV-0203116_37	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0203116_39	phrog_18593	86.6	3.1e-25	N/A	unknown function
UniRef90	UHGV-0203116_39	UniRef90_A0A1C6AVU9	178.0	0	Carbohydrate binding domain	N/A
eggNOG-mapper	UHGV-0203116_39	552398.HMPREF0866_03095	137.0	5.65e-39	N/A	N/A
Pfam	UHGV-0203116_39	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0203116_39	PF14600	N/A	N/A	N/A	N/A
KOfam	UHGV-0203116_40	K01447	90.1	3.5e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0203116_40	phrog_670	63.6	3.8e-18	endolysin	lysis
UniRef90	UHGV-0203116_40	UniRef90_A0A1Y4EW15	483.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0203116_40	938288.HG326226_gene880	161.0	0	Negative regulator of beta-lactamase expression	N/A
Pfam	UHGV-0203116_40	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0203116_40	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
PHROG	UHGV-0203116_41	phrog_4105	95.5	3.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-0203116_41	903814.ELI_1319	74.7	4.93e-16	N/A	N/A
PHROG	UHGV-0203116_42	phrog_20258	75.6	4.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0203116_42	411471.SUBVAR_06974	82.4	3.44e-19	N/A	N/A
KOfam	UHGV-0203116_43	K13276	67.8	7.5e-20	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-0203116_43	phrog_11157	220.3	0	N/A	unknown function
UniRef90	UHGV-0203116_43	UniRef90_UPI000681F570	413.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0203116_43	33035.JPJF01000023_gene3227	283.0	0	N/A	N/A
Pfam	UHGV-0203116_43	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0203116_43	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
NCBIFam	UHGV-0203116_43	NF033510.3	N/A	N/A	Ca2+-stabilized repeat-containing adhesin	N/A
COG	UHGV-0203116_43	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0203116_43	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
UniRef90	UHGV-0203116_44	UniRef90_UPI000A1CE24C	167.0	0	PF13754 domain-containing protein	N/A
Pfam	UHGV-0203116_44	PF13754	N/A	N/A	N/A	Big_3_4
eggNOG-mapper	UHGV-0203116_45	1280698.AUJS01000007_gene1056	62.0	0.0000000000231	N/A	N/A
structural_annotation	UHGV-0203116_45	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
COG	UHGV-0203116_47	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
UniRef90	UHGV-0203116_48	UniRef90_UPI000A1C8054	137.0	1.07e-36	leucine-rich repeat domain-containing protein	N/A
Pfam	UHGV-0203116_48	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
structural_annotation	UHGV-0203116_48	PF13306	N/A	N/A	N/A	N/A
UniRef90	UHGV-0203116_50	UniRef90_UPI0009E678A3	153.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0203116_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0203116_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0203116_51	K03088	49.6	0.00000000000006	rpoE; RNA polymerase sigma-70 factor, ECF subfamily	N/A
UniRef90	UHGV-0203116_51	UniRef90_UPI000A1CD45A	370.0	0	sigma-70 family RNA polymerase sigma factor	N/A
Pfam	UHGV-0203116_51	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
NCBIFam	UHGV-0203116_51	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0203116_51	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
KOfam	UHGV-0203116_52	K06400	296.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0203116_52	phrog_95	307.6	0	integrase	integration and excision
UniRef90	UHGV-0203116_52	UniRef90_UPI000A1CD91C	950.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0203116_52	1120746.CCNL01000010_gene1415	502.0	0	recombinase activity	N/A
Pfam	UHGV-0203116_52	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0203116_52	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0203116_52	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0203116_52	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0203116	Yes	33,202	46	100	1
UHGV-0379925	No	11,888	45	30	1