vOTU vOTU-048164

vOTU: vOTU-048164

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-048164
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-03609 → vGENUS-05467 → vSUBGEN-35601 → vOTU-048164
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia
Host range breadth	Genus
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0207122
Biosample ID	SAMN11252274
Genome length (bp)	41,331 bps
CheckV completeness	100.00% (Complete)
CDS count	55
CDS density	92.68%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia	Total connections	52	Host agreement	92.31
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp900553805	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0207122_7	K00558	78.3	7.4e-23	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0207122_7	phrog_116	82.3	4.2e-24	DNA methyltransferase	other
UniRef90	UHGV-0207122_7	UniRef90_K1R461	162.0	0	DNA-cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0207122_7	588581.Cpap_0162	162.0	1.4013e-45	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0207122_7	oMTase_00004	110.1	3.1e-32	orphan methyltransferase	RM
Pfam	UHGV-0207122_7	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0207122_7	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
eggNOG-mapper	UHGV-0207122_8	657322.FPR_23130	69.3	0.000000000000116	N/A	N/A
KOfam	UHGV-0207122_9	K00558	46.9	6.5e-20	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0207122_9	phrog_16528	92.7	8.1e-28	DNA methyltransferase	other
UniRef90	UHGV-0207122_9	UniRef90_A0A6N9PX21	301.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0207122_9	657322.FPR_26610	179.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
Pfam	UHGV-0207122_9	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0207122_9	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0207122_10	phrog_9298	71.5	1e-20	radical SAM domain protein	other
UniRef90	UHGV-0207122_10	UniRef90_A0A841L4D7	287.0	0	Radical SAM superfamily enzyme YgiQ (UPF0313 family)	N/A
eggNOG-mapper	UHGV-0207122_10	742738.HMPREF9460_03770	272.0	0	radical SAM domain protein	N/A
COG	UHGV-0207122_10	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0207122_10	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
Pfam	UHGV-0207122_11	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0207122_11	PF05223,NF003262	N/A	N/A	N/A	N/A
PHROG	UHGV-0207122_16	phrog_25567	40.5	0.000000000032	N/A	unknown function
UniRef90	UHGV-0207122_16	UniRef90_UPI00164AED9E	91.3	1.4e-21	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0207122_16	1235798.C817_04600	67.8	0.000000000000374	N/A	N/A
structural_annotation	UHGV-0207122_16	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0207122_19	phrog_3584	114.7	7.4e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0207122_19	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0207122_21	phrog_606	63.5	3.2e-18	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0207122_21	1226322.HMPREF1545_03842	145.0	1.57996e-41	DNA-packaging protein gp3	N/A
Pfam	UHGV-0207122_21	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0207122_21	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0207122_22	K06909	136.9	1.90001e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0207122_22	phrog_2	124.7	1.2e-36	terminase large subunit	head and packaging
UniRef90	UHGV-0207122_22	UniRef90_UPI0006875436	611.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0207122_22	1410650.JHWL01000003_gene2834	611.0	0	N/A	N/A
Pfam	UHGV-0207122_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0207122_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0207122_22	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0207122_23	phrog_156	320.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0207122_23	1410650.JHWL01000003_gene2833	542.0	0	N/A	N/A
structural_annotation	UHGV-0207122_23	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0207122_24	K07584	61.8	1.4e-17	N/A	N/A
PHROG	UHGV-0207122_24	phrog_4478	56.7	3e-16	peptidase	other
UniRef90	UHGV-0207122_24	UniRef90_A0A6I5ZSU6	58.5	0.00000000767	Cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0207122_24	1232453.BAIF02000011_gene3357	54.7	0.0000000281	Cysteine protease Prp	N/A
Pfam	UHGV-0207122_24	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0207122_24	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207122_24	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0207122_25	phrog_13908	140.3	1.19993e-41	N/A	unknown function
UniRef90	UHGV-0207122_25	UniRef90_A0A174CZ20	72.8	0.0000000000656	Predicted ribosomal protein	N/A
eggNOG-mapper	UHGV-0207122_25	748224.HMPREF9436_01398	73.6	0.00000000000642	Cysteine protease Prp	N/A
COG	UHGV-0207122_25	COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0207122_26	phrog_1357	258.1	0	major head protein	head and packaging
UniRef90	UHGV-0207122_26	UniRef90_A0A2V2GQW4	384.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0207122_26	411483.FAEPRAA2165_01040	341.0	0	N/A	N/A
Pfam	UHGV-0207122_26	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0207122_26	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0207122_26	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0207122_27	phrog_15239	50.5	0.000000000000031	N/A	unknown function
PHROG	UHGV-0207122_28	phrog_12105	111.0	7.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0207122_28	1226322.HMPREF1545_03850	53.5	0.000000253	N/A	N/A
PHROG	UHGV-0207122_29	phrog_511	181.9	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0207122_29	1410650.JHWL01000003_gene2827	326.0	0	N/A	N/A
structural_annotation	UHGV-0207122_29	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0207122_31	1410650.JHWL01000003_gene2815	95.9	2.79e-20	N/A	N/A
PHROG	UHGV-0207122_32	phrog_22978	105.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0207122_32	748224.HMPREF9436_01406	206.0	0	N/A	N/A
Pfam	UHGV-0207122_32	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-0207122_32	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
PHROG	UHGV-0207122_35	phrog_38044	44.5	0.00000000000056	N/A	unknown function
eggNOG-mapper	UHGV-0207122_35	762982.HMPREF9442_01191	67.8	0.00000000109	cellulase activity	N/A
Pfam	UHGV-0207122_35	PF03406	N/A	N/A	Phage tail fibre repeat	Phage_fiber_2
COG	UHGV-0207122_35	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
KOfam	UHGV-0207122_40	K08640	101.5	1.4e-29	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0207122_40	phrog_894	54.5	0.0000000000000018	endolysin	lysis
UniRef90	UHGV-0207122_40	UniRef90_R5EEQ7	174.0	0	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-0207122_40	931626.Awo_c26840	113.0	6.64e-29	Peptidase M15	N/A
Pfam	UHGV-0207122_40	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0207122_40	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0207122_40	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207122_40	PF05951,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0207122_41	phrog_937	53.3	0.0000000000000055	hemolysin	other
eggNOG-mapper	UHGV-0207122_42	1094508.Tsac_2409	79.3	2.18e-16	N/A	N/A
Pfam	UHGV-0207122_42	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0207122_42	PF09682,TIGR01673	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207122_43	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0207122_44	phrog_3754	91.4	7.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0207122_44	1123392.AQWL01000012_gene2470	55.5	0.0000000438	N/A	N/A
PHROG	UHGV-0207122_45	phrog_21718	80.8	1.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0207122_45	397290.C810_05210	73.9	0.00000000000000639	N/A	N/A
PHROG	UHGV-0207122_46	phrog_22984	59.4	6.3e-17	N/A	unknown function
PHROG	UHGV-0207122_47	phrog_16490	88.8	1e-26	N/A	unknown function
UniRef90	UHGV-0207122_47	UniRef90_A0A7M1RZU0	104.0	3.82e-23	Spike protein/glycoprotein	N/A
eggNOG-mapper	UHGV-0207122_47	476272.RUMHYD_01770	117.0	1.76e-29	N/A	N/A
PHROG	UHGV-0207122_48	phrog_20016	174.6	0	N/A	unknown function
UniRef90	UHGV-0207122_48	UniRef90_A0A2Z4QB67	151.0	2.24208e-44	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0207122_48	1226322.HMPREF1545_00077	139.0	2.05e-40	N/A	N/A
structural_annotation	UHGV-0207122_48	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207122_49	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0207122_50	K14059	139.4	3.20001e-41	int; integrase	N/A
PHROG	UHGV-0207122_50	phrog_1	145.8	3.40516e-43	integrase	integration and excision
UniRef90	UHGV-0207122_50	UniRef90_A0A3D3Y0G6	301.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0207122_50	693746.OBV_41260	236.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0207122_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0207122_50	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0207122_50	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
Pfam	UHGV-0207122_51	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0207122_51	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0207122_53	K18830	47.9	0.0000000000003	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
UniRef90	UHGV-0207122_53	UniRef90_R5M8X4	77.8	5.41e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0207122_53	97138.C820_01960	68.6	0.000000000000399	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0207122_53	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0207122_53	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0207122	Yes	41,331	61	100	1
UHGV-0192633	No	12,957	63	31	1