vOTU vOTU-048290

vOTU: vOTU-048290

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-048290
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-02099 → vGENUS-14458 → vSUBGEN-24291 → vOTU-048290
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Host range breadth	Order
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0207895
Biosample ID	SAMN10407346
Genome length (bp)	40,574 bps
CheckV completeness	100.00% (Complete)
CDS count	58
CDS density	92.62%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	21	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	4	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0207895_2	phrog_9804	173.4	0	N/A	unknown function
UniRef90	UHGV-0207895_2	UniRef90_UPI001E312ACC	194.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0207895_2	1121344.JHZO01000003_gene981	199.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0207895_2	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0207895_2	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0207895_3	phrog_5708	121.8	4e-36	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207895_3	UniRef90_UPI001F44E98A	157.0	1.56945e-42	replisome organizer	N/A
eggNOG-mapper	UHGV-0207895_3	1200557.JHWV01000006_gene1748	108.0	3.09e-25	DnaD domain protein	N/A
COG	UHGV-0207895_3	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0207895_3	PF09681,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0207895_11	K22300	46.1	0.00000000000097	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0207895_11	UniRef90_E2ZIF0	95.1	2.23e-22	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0207895_11	748224.HMPREF9436_01444	95.1	3.74e-23	N/A	N/A
Pfam	UHGV-0207895_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0207895_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0207895_11	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0207895_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0207895_14	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0207895_14	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0207895_15	K14059	183.9	0	int; integrase	N/A
PHROG	UHGV-0207895_15	phrog_1	169.5	0	integrase	integration and excision
UniRef90	UHGV-0207895_15	UniRef90_A0A355NK33	211.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0207895_15	1095750.HMPREF9970_1688	201.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0207895_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0207895_15	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0207895_15	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207895_17	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0207895_18	phrog_16490	56.7	5.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0207895_18	641112.ACOK01000103_gene525	87.8	1.44e-18	N/A	N/A
Pfam	UHGV-0207895_21	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
eggNOG-mapper	UHGV-0207895_22	1232447.BAHW02000027_gene1859	54.7	0.00000747	Papain-like cysteine protease AvrRpt2	N/A
COG	UHGV-0207895_22	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
PHROG	UHGV-0207895_23	phrog_608	61.0	1.9e-17	holin	lysis
UniRef90	UHGV-0207895_23	UniRef90_A0A1I3T262	107.0	9.8e-28	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0207895_23	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0207895_23	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0207895_24	phrog_1863	61.2	9.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0207895_24	665956.HMPREF1032_03922	92.4	1.4e-23	N/A	N/A
UniRef90	UHGV-0207895_25	UniRef90_A0A1C6CVE5	820.0	0	ADP-ribosyltransferase exoenzyme	N/A
eggNOG-mapper	UHGV-0207895_25	1408437.JNJN01000060_gene452	545.0	0	heme binding	N/A
COG	UHGV-0207895_25	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
eggNOG-mapper	UHGV-0207895_26	1203606.HMPREF1526_02741	101.0	5.54e-21	N/A	N/A
PHROG	UHGV-0207895_28	phrog_511	226.6	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0207895_28	1519439.JPJG01000060_gene1903	223.0	0	N/A	N/A
structural_annotation	UHGV-0207895_28	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207895_29	UniRef90_R6I1X1	65.9	0.0000000000377	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-0207895_29	552398.HMPREF0866_01159	144.0	4.56963e-42	N/A	N/A
Pfam	UHGV-0207895_29	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
KOfam	UHGV-0207895_32	K19721	241.9	0	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0207895_32	phrog_819	121.1	0	tail protein	tail
eggNOG-mapper	UHGV-0207895_32	1519439.JPJG01000060_gene1892	85.5	0.0000000000000293	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0207895_32	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0207895_32	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0207895_33	phrog_15239	61.2	1.4e-17	N/A	unknown function
PHROG	UHGV-0207895_34	phrog_1357	287.7	0	major head protein	head and packaging
UniRef90	UHGV-0207895_34	UniRef90_A0A1Y4WLZ7	416.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0207895_34	1203606.HMPREF1526_02746	351.0	0	N/A	N/A
NCBIFam	UHGV-0207895_34	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0207895_34	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0207895_35	phrog_13908	264.9	0	N/A	unknown function
UniRef90	UHGV-0207895_35	UniRef90_A0A844DRV7	78.2	0.00000000000215	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0207895_35	1321782.HMPREF1986_00346	63.2	0.0000000195	N/A	N/A
COG	UHGV-0207895_36	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207895_36	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0207895_37	phrog_12105	104.5	6.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0207895_37	1519439.JPJG01000060_gene1891	70.1	0.000000000000148	N/A	N/A
PHROG	UHGV-0207895_38	phrog_156	326.2	0	portal protein	head and packaging
UniRef90	UHGV-0207895_38	UniRef90_A0A8D9UH10	747.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0207895_38	748224.HMPREF9436_01396	519.0	0	N/A	N/A
structural_annotation	UHGV-0207895_38	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0207895_39	K06909	103.0	3.4e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0207895_39	phrog_979	147.0	2.8026e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0207895_39	UniRef90_A0A8D9PDR5	764.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-0207895_39	657322.FPR_02290	568.0	0	Terminase-like family	N/A
Pfam	UHGV-0207895_39	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0207895_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0207895_39	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207895_40	UniRef90_U2R3C0	162.0	0	Nascent polypeptide-associated complex domain protein	N/A
eggNOG-mapper	UHGV-0207895_40	1226322.HMPREF1545_00042	162.0	0	N/A	N/A
structural_annotation	UHGV-0207895_40	PF13542	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207895_42	UniRef90_A0A8D9PDT5	56.2	0.0000000287	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-0207895_43	phrog_38832	57.6	3.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-0207895_43	665956.HMPREF1032_03087	59.7	0.0000000031	N/A	N/A
structural_annotation	UHGV-0207895_43	PF11717	N/A	N/A	N/A	N/A
KOfam	UHGV-0207895_44	K01160	61.0	3.3e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0207895_44	phrog_34	50.0	0.000000000000059	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207895_44	UniRef90_UPI0018ABA1B6	141.0	1.05001e-40	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0207895_44	561177.ANHYDRO_01396	92.8	1.68e-22	Endodeoxyribonuclease RusA	N/A
COG	UHGV-0207895_44	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0207895_44	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207895_45	UniRef90_UPI0012AD39DD	57.4	0.00000173	leucine-rich repeat protein	N/A
structural_annotation	UHGV-0207895_46	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
KOfam	UHGV-0207895_49	K03111	135.5	5.8e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0207895_49	phrog_44	138.3	4.39994e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207895_49	UniRef90_A0A2U1BEJ1	159.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0207895_49	1519439.JPJG01000082_gene432	120.0	1.33e-32	Single-strand binding protein family	N/A
Pfam	UHGV-0207895_49	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0207895_49	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0207895_49	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0207895_49	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0207895_49	PF00436,MF_00984,NF006445,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0207895_50	phrog_7566	91.6	4.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0207895_50	693746.OBV_25470	92.8	2.68e-23	N/A	N/A
PHROG	UHGV-0207895_51	phrog_72	59.6	4.6e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207895_51	UniRef90_A0A8D9PDS2	186.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0207895_51	445972.ANACOL_01825	145.0	9.09022e-42	N/A	N/A
structural_annotation	UHGV-0207895_51	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0207895_52	phrog_7838	139.8	1.6e-41	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207895_52	UniRef90_A0A8D9UGW3	226.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0207895_52	742767.HMPREF9456_02397	164.0	0	N/A	N/A
structural_annotation	UHGV-0207895_52	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0207895_53	phrog_253	77.7	1.5e-22	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207895_53	UniRef90_A0A8D9PDS3	135.0	5.41e-37	Resistance protein	N/A
eggNOG-mapper	UHGV-0207895_53	748224.HMPREF9436_03356	110.0	1.35e-28	Siphovirus Gp157	N/A
Pfam	UHGV-0207895_53	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0207895_53	PF05565	N/A	N/A	N/A	N/A
KOfam	UHGV-0207895_55	K01449	60.3	3.5e-17	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0207895_55	phrog_30550	178.0	0	N/A	unknown function
UniRef90	UHGV-0207895_55	UniRef90_R5ITH9	149.0	1.04004e-41	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0207895_55	1519439.JPJG01000077_gene920	123.0	3.11e-33	Cell Wall Hydrolase	N/A
Pfam	UHGV-0207895_55	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-0207895_55	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207895_57	PF21291,NF041951,COG1513	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0207895	Yes	40,574	61	100	1
UHGV-0208066	No	41,986	60	100	1
UHGV-0202424	No	30,157	61	74	1