vOTU vOTU-048391

vOTU: vOTU-048391

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-048391
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00089 → vSUBGEN-31727 → vOTU-048391
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208803
Biosample ID	N/A
Genome length (bp)	43,618 bps
CheckV completeness	100.00% (Complete)
CDS count	56
CDS density	93.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	314	Host agreement	94.9
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	19	Host agreement	89.47

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0208803_1	phrog_3584	123.1	1.9e-36	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0208803_1	642492.Clole_0725	63.2	0.00000000486	N/A	N/A
structural_annotation	UHGV-0208803_1	PF21578,MF_00360	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0208803_2	PF08271	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0208803_4	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_6	phrog_190	97.8	1.1e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0208803_6	UniRef90_UPI0006C2AC63	127.0	1.24e-34	N/A	N/A
eggNOG-mapper	UHGV-0208803_6	693746.OBV_25250	120.0	8.16e-33	N/A	N/A
Pfam	UHGV-0208803_6	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0208803_6	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_10	phrog_38832	61.7	6.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0208803_10	1232443.BAIA02000078_gene48	122.0	8.48e-35	N/A	N/A
structural_annotation	UHGV-0208803_10	PF09871,COG4014	N/A	N/A	N/A	N/A
UniRef90	UHGV-0208803_11	UniRef90_UPI001BB4805C	80.1	7.28e-16	N/A	N/A
Pfam	UHGV-0208803_11	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0208803_11	PF04448	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_12	phrog_15609	229.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0208803_12	1501230.ET33_21155	122.0	1.87e-29	N/A	N/A
Pfam	UHGV-0208803_12	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0208803_12	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-0208803_12	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_13	phrog_8470	263.0	0	N/A	unknown function
UniRef90	UHGV-0208803_13	UniRef90_UPI0002D9F0BD	307.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0208803_13	1007096.BAGW01000031_gene117	307.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0208803_13	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0208803_13	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_14	phrog_36399	57.4	2.8e-16	N/A	unknown function
structural_annotation	UHGV-0208803_17	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0208803_20	PF10548	N/A	N/A	N/A	N/A
KOfam	UHGV-0208803_23	K22300	55.3	0.0000000000000014	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0208803_23	phrog_8	48.3	0.00000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0208803_23	UniRef90_E2ZIF0	116.0	5.77e-31	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0208803_23	748224.HMPREF9436_01444	116.0	9.67e-32	N/A	N/A
Pfam	UHGV-0208803_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0208803_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0208803_23	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0208803_24	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-0208803_24	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
Pfam	UHGV-0208803_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0208803_26	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0208803_27	K06400	246.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0208803_27	phrog_95	262.3	0	integrase	integration and excision
UniRef90	UHGV-0208803_27	UniRef90_UPI0012D934F0	414.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0208803_27	1408437.JNJN01000002_gene1420	402.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0208803_27	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0208803_27	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0208803_27	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0208803_27	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0208803_27	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0208803_28	UniRef90_A0A7M1RTM1	77.4	0.0000000000000116	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0208803_28	1378168.N510_03079	69.3	0.00000000000547	N/A	N/A
PHROG	UHGV-0208803_33	phrog_25567	40.8	0.000000000027	N/A	unknown function
UniRef90	UHGV-0208803_33	UniRef90_UPI00164AED9E	89.4	7.74e-21	helix-turn-helix domain-containing protein	N/A
COG	UHGV-0208803_33	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0208803_33	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0208803_35	760568.Desku_0885	56.6	0.000000321	N/A	N/A
structural_annotation	UHGV-0208803_35	PF14528,PF05204,MF_01420,TIGR00647,COG3780	N/A	N/A	N/A	N/A
UniRef90	UHGV-0208803_36	UniRef90_A0A358M2Y7	225.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0208803_36	525254.HMPREF0072_1273	216.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0208803_36	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0208803_36	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_37	phrog_6918	97.7	6.7e-29	holin	lysis
UniRef90	UHGV-0208803_37	UniRef90_A0A316QCY7	102.0	4.93e-26	Holin	N/A
eggNOG-mapper	UHGV-0208803_37	1297617.JPJD01000020_gene301	100.0	3.45e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0208803_37	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0208803_37	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_40	phrog_937	62.9	5.8e-18	hemolysin	other
eggNOG-mapper	UHGV-0208803_40	1519439.JPJG01000023_gene533	79.7	3.1e-18	N/A	N/A
PHROG	UHGV-0208803_41	phrog_37900	53.0	5.5e-21	N/A	unknown function
UniRef90	UHGV-0208803_41	UniRef90_R5IRZ6	566.0	0	N/A	N/A
eggNOG-mapper	UHGV-0208803_41	1519439.JPJG01000060_gene1894	259.0	0	N/A	N/A
Pfam	UHGV-0208803_41	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0208803_41	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0208803_41	PF19789	N/A	N/A	N/A	N/A
KOfam	UHGV-0208803_42	K16628	177.6	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0208803_42	phrog_819	159.2	0	tail protein	tail
eggNOG-mapper	UHGV-0208803_42	1232443.BAIA02000078_gene14	82.8	0.00000000000018	nuclear chromosome segregation	N/A
Pfam	UHGV-0208803_42	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0208803_42	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0208803_42	PF06903	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0208803_43	PF01835,NF005176,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_44	phrog_22978	139.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0208803_44	1408437.JNJN01000039_gene389	496.0	0	heme binding	N/A
Pfam	UHGV-0208803_44	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
COG	UHGV-0208803_44	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
UniRef90	UHGV-0208803_45	UniRef90_R5DCX9	187.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0208803_45	1410650.JHWL01000003_gene2815	136.0	4.31e-33	N/A	N/A
PHROG	UHGV-0208803_46	phrog_12105	123.4	1.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-0208803_46	1519439.JPJG01000060_gene1891	71.2	0.0000000000000351	N/A	N/A
PHROG	UHGV-0208803_48	phrog_1357	217.4	0	major head protein	head and packaging
UniRef90	UHGV-0208803_48	UniRef90_A0A2V2CFL5	400.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0208803_48	1410650.JHWL01000003_gene2830	274.0	0	N/A	N/A
Pfam	UHGV-0208803_48	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0208803_48	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0208803_48	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_49	phrog_13908	149.3	2.24208e-44	N/A	unknown function
eggNOG-mapper	UHGV-0208803_49	1410650.JHWL01000003_gene2831	103.0	6.94e-23	N/A	N/A
PHROG	UHGV-0208803_50	phrog_156	293.9	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0208803_50	1410650.JHWL01000003_gene2833	541.0	0	N/A	N/A
structural_annotation	UHGV-0208803_50	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_52	phrog_37329	48.7	0.000000000000076	N/A	unknown function
Pfam	UHGV-0208803_52	PF00041	N/A	N/A	Fibronectin type III domain	fn3
COG	UHGV-0208803_52	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0208803_52	PF17744,PF16655,MF_01905,NF038116,COG3979,COG2033	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0208803_53	537007.BLAHAN_05255	60.8	0.000000424	N/A	N/A
PHROG	UHGV-0208803_54	phrog_511	233.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0208803_54	1410650.JHWL01000003_gene2827	319.0	0	N/A	N/A
structural_annotation	UHGV-0208803_54	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-0208803_55	K06909	145.8	3.60134e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0208803_55	phrog_979	134.3	4.99997e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0208803_55	UniRef90_A0A810Q5R0	644.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0208803_55	1410650.JHWL01000003_gene2834	638.0	0	N/A	N/A
Pfam	UHGV-0208803_55	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0208803_55	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0208803_55	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0208803_56	phrog_606	74.1	1.9e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0208803_56	UniRef90_UPI001F487344	125.0	3.92e-34	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0208803_56	397290.C810_05185	126.0	8e-35	DNA-packaging protein gp3	N/A
Pfam	UHGV-0208803_56	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0208803_56	PF16677	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0208803	Yes	43,618	59	100	1
UHGV-1725473	No	14,896	60	36	1
UHGV-1776308	No	13,791	60	33	1
UHGV-1547348	No	11,329	61	27	1