vOTU vOTU-048528

vOTU: vOTU-048528

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-048528
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter sp001916835
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00478 → vGENUS-00461 → vSUBGEN-22591 → vOTU-048528
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Host range breadth	Order
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0209861
Biosample ID	SAMN11252266
Genome length (bp)	41,296 bps
CheckV completeness	100.00% (Complete)
CDS count	58
CDS density	93.79%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	60	Host agreement	90
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter sp001916835	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0209861_2	UniRef90_A0A1Y3ZRE4	81.3	7.34e-17	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0209861_2	1160721.RBI_I00363	56.2	0.000000192	Cro/C1-type HTH DNA-binding domain	N/A
structural_annotation	UHGV-0209861_2	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0209861_3	K22300	52.9	0.000000000000007	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0209861_3	UniRef90_A0A1Y3ZNM0	87.0	2.85e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0209861_3	693746.OBV_25500	81.3	9.78e-20	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0209861_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0209861_3	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0209861_3	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_4	phrog_2657	163.0	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0209861_4	UniRef90_UPI0019674AC1	310.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0209861_4	411473.RUMCAL_02620	304.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0209861_4	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0209861_4	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0209861_4	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0209861_4	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0209861_10	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_12	phrog_4973	41.9	0.000000000015	N/A	unknown function
UniRef90	UHGV-0209861_12	UniRef90_A0A3D3Y5F2	65.5	0.00000000000152	DNA-binding protein	N/A
Pfam	UHGV-0209861_12	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0209861_12	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_13	phrog_253	85.6	5.9e-25	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209861_13	UniRef90_A0A1C5N4H2	142.0	1.63e-40	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-0209861_13	1410670.JHXF01000015_gene2268	91.7	2.54e-21	Siphovirus Gp157	N/A
Pfam	UHGV-0209861_13	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0209861_13	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_14	phrog_155	119.7	2.4e-35	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209861_14	UniRef90_A0A3D1PJF8	234.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0209861_14	1304866.K413DRAFT_1196	202.0	0	ERF superfamily	N/A
Pfam	UHGV-0209861_14	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0209861_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0209861_14	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_15	phrog_72	68.0	1.1e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209861_15	UniRef90_A0A8D9PDS2	168.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0209861_15	445972.ANACOL_01825	146.0	2.26029e-42	N/A	N/A
structural_annotation	UHGV-0209861_15	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_16	phrog_7566	91.3	6.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0209861_16	508419.F8J187_9CAUD	103.0	1.54e-27	N/A	N/A
KOfam	UHGV-0209861_17	K03111	143.3	2.29953e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0209861_17	phrog_44	142.4	2.49992e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209861_17	UniRef90_A0A1Q6RGI0	208.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0209861_17	1226322.HMPREF1545_04080	207.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0209861_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0209861_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0209861_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0209861_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0209861_17	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_18	phrog_15768	101.8	3.3e-32	N/A	unknown function
UniRef90	UHGV-0209861_18	UniRef90_A0A8D9PDU3	229.0	0	N/A	N/A
eggNOG-mapper	UHGV-0209861_18	203119.Cthe_2466	82.0	8.73e-16	N/A	N/A
AcrCatalog	UHGV-0209861_18	cluster_38323	86.7	8.06e-23	NA	N/A
Pfam	UHGV-0209861_18	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0209861_18	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0209861_20	K01160	42.7	0.000000000013	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0209861_20	phrog_4632	66.0	4.6e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209861_20	UniRef90_A0A7X8IB41	117.0	1.76e-31	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0209861_20	469604.HMPREF0946_00819	63.5	0.0000000000285	N/A	N/A
structural_annotation	UHGV-0209861_20	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_22	phrog_474	101.4	1.3e-29	phosphofructokinase	other
UniRef90	UHGV-0209861_22	UniRef90_A0A1Q6KPW7	121.0	2.64e-34	N/A	N/A
eggNOG-mapper	UHGV-0209861_22	428125.CLOLEP_01367	114.0	3.49e-32	N/A	N/A
Pfam	UHGV-0209861_22	PF19905	N/A	N/A	N/A	DUF6378
PHROG	UHGV-0209861_23	phrog_757	178.7	0	DNA methyltransferase	other
UniRef90	UHGV-0209861_23	UniRef90_UPI001C00B13F	405.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0209861_23	748224.HMPREF9436_03069	314.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0209861_23	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0209861_23	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_25	phrog_38832	90.8	9.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0209861_25	665956.HMPREF1032_00143	91.3	5.25e-21	N/A	N/A
structural_annotation	UHGV-0209861_25	PF11717	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_26	phrog_599	43.3	0.0000000000067	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0209861_26	UniRef90_A0A3A6JJS1	127.0	9.89e-37	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0209861_26	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0209861_26	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0209861_26	TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_27	phrog_22543	41.6	0.000000000014	N/A	unknown function
UniRef90	UHGV-0209861_27	UniRef90_A0A8D9PDT5	62.4	0.000000000229	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-0209861_32	phrog_8	45.1	0.0000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0209861_32	UniRef90_A0A1C6J963	110.0	2.1e-30	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0209861_32	536232.CLM_2628	47.8	0.0000037	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0209861_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0209861_32	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0209861_32	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_33	phrog_872	157.9	0	N/A	unknown function
UniRef90	UHGV-0209861_33	UniRef90_A0A8J6M9F5	227.0	0	N/A	N/A
eggNOG-mapper	UHGV-0209861_33	1519439.JPJG01000060_gene1880	146.0	1.23006e-41	N/A	N/A
Pfam	UHGV-0209861_33	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0209861_33	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0209861_33	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_34	phrog_606	78.3	9.7e-23	terminase small subunit	head and packaging
UniRef90	UHGV-0209861_34	UniRef90_UPI00195648BB	165.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0209861_34	397290.C810_05185	132.0	5.19e-37	DNA-packaging protein gp3	N/A
Pfam	UHGV-0209861_34	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0209861_34	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0209861_35	K06909	96.5	3e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0209861_35	phrog_979	196.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0209861_35	UniRef90_UPI001BB47C17	801.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0209861_35	748224.HMPREF9436_01395	633.0	0	Terminase-like family	N/A
Pfam	UHGV-0209861_35	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0209861_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0209861_35	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_36	phrog_156	319.4	0	portal protein	head and packaging
UniRef90	UHGV-0209861_36	UniRef90_A0A8D9UH10	623.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0209861_36	748224.HMPREF9436_02547	502.0	0	N/A	N/A
structural_annotation	UHGV-0209861_36	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0209861_37	K07584	54.9	0.000000000000001	N/A	N/A
PHROG	UHGV-0209861_37	phrog_4478	50.6	0.000000000000016	peptidase	other
UniRef90	UHGV-0209861_37	UniRef90_A0A117KW78	63.5	0.0000000000915	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0209861_37	273068.TTE0914	63.5	0.0000000000154	Cysteine protease Prp	N/A
Pfam	UHGV-0209861_37	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0209861_37	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0209861_37	PF04327,NF011125,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_38	phrog_13908	243.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0209861_38	1410650.JHWL01000003_gene2831	102.0	2.21e-22	N/A	N/A
PHROG	UHGV-0209861_39	phrog_1357	267.7	0	major head protein	head and packaging
UniRef90	UHGV-0209861_39	UniRef90_UPI001D02EBA7	464.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0209861_39	1203606.HMPREF1526_02746	359.0	0	N/A	N/A
Pfam	UHGV-0209861_39	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0209861_39	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0209861_39	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0209861_41	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0209861_42	1226322.HMPREF1545_00064	63.5	0.0000000188	N/A	N/A
PHROG	UHGV-0209861_44	phrog_199	89.8	2.5e-26	holin	lysis
UniRef90	UHGV-0209861_44	UniRef90_K1UL76	293.0	0	Holin, toxin secretion/phage lysis	N/A
eggNOG-mapper	UHGV-0209861_44	411467.BACCAP_00280	141.0	3.80004e-41	Bacteriophage holin family	N/A
Pfam	UHGV-0209861_44	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0209861_44	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0209861_44	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0209861_44	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0209861_45	K08640	89.0	7.3e-26	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0209861_45	phrog_18955	150.5	5.60519e-45	N/A	unknown function
UniRef90	UHGV-0209861_45	UniRef90_UPI001C035E39	599.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0209861_45	1235797.C816_04171	331.0	0	Peptidase M15	N/A
Pfam	UHGV-0209861_45	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0209861_45	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0209861_45	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0209861_45	PF09992,PF08291,COG4632,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0209861_46	phrog_12105	107.0	1.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-0209861_46	1226322.HMPREF1545_03850	70.9	0.0000000000000454	N/A	N/A
PHROG	UHGV-0209861_47	phrog_511	231.4	0	internal virion protein	head and packaging
UniRef90	UHGV-0209861_47	UniRef90_A0A8D9UH72	536.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-0209861_47	1226322.HMPREF1545_00785	345.0	0	N/A	N/A
structural_annotation	UHGV-0209861_47	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
Pfam	UHGV-0209861_48	PF10473	N/A	N/A	Leucine-rich repeats of kinetochore protein Cenp-F/LEK1	CENP-F_leu_zip
eggNOG-mapper	UHGV-0209861_49	1226322.HMPREF1545_00786	93.2	3.29e-17	N/A	N/A
PHROG	UHGV-0209861_50	phrog_22978	963.1	0	N/A	unknown function
UniRef90	UHGV-0209861_50	UniRef90_UPI001CF7F562	402.0	0	peptidoglycan DD-metalloendopeptidase family protein	N/A
eggNOG-mapper	UHGV-0209861_50	1410650.JHWL01000003_gene2814	287.0	0	N/A	N/A
Pfam	UHGV-0209861_50	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
PHROG	UHGV-0209861_53	phrog_22984	47.5	0.00000000000031	N/A	unknown function
PHROG	UHGV-0209861_54	phrog_16490	55.9	9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0209861_54	476272.RUMHYD_01770	53.5	0.00000488	N/A	N/A
structural_annotation	UHGV-0209861_55	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0209861_56	1408437.JNJN01000043_gene801	72.4	0.000000000000181	N/A	N/A
KOfam	UHGV-0209861_57	K06400	269.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0209861_57	phrog_95	275.5	0	integrase	integration and excision
UniRef90	UHGV-0209861_57	UniRef90_A0A1C6HT72	383.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-0209861_57	357809.Cphy_2997	268.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0209861_57	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0209861_57	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0209861_57	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0209861_57	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-0209861_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0209861_58	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0209861	Yes	41,296	55	100	1