vOTU vOTU-048616

vOTU: vOTU-048616

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-048616
Number of genomes	10
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00411 → vSUBGEN-21395 → vOTU-048616
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0210434
Biosample ID	SAMN00034187
Genome length (bp)	38,013 bps
CheckV completeness	100.00% (Complete)
CDS count	69
CDS density	95.45%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	180	Host agreement	97.78
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	7	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0210434_1	phrog_20016	193.2	0	N/A	unknown function
UniRef90	UHGV-0210434_1	UniRef90_A0A285PT46	184.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0210434_1	1226322.HMPREF1545_00077	169.0	0	N/A	N/A
structural_annotation	UHGV-0210434_1	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210434_2	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210434_3	1226322.HMPREF1545_00079	94.7	1.53e-23	N/A	N/A
KOfam	UHGV-0210434_4	K14059	126.9	2.7e-37	int; integrase	N/A
PHROG	UHGV-0210434_4	phrog_1	151.8	5.60519e-45	integrase	integration and excision
UniRef90	UHGV-0210434_4	UniRef90_A0A810Q0Y2	410.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0210434_4	693746.OBV_43340	357.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0210434_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0210434_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0210434_4	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210434_5	PF12844	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_7	phrog_5319	54.0	0.0000000000000018	outer membrane protein	other
eggNOG-mapper	UHGV-0210434_7	1158601.I585_00731	70.5	0.0000000000065	N/A	N/A
Pfam	UHGV-0210434_7	PF12773	N/A	N/A	Double zinc ribbon	DZR
structural_annotation	UHGV-0210434_7	PF03843,MF_01959,TIGR00752,NF041910,COG3390	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210434_10	PF13601,TIGR04176,COG1846	N/A	N/A	N/A	N/A
KOfam	UHGV-0210434_11	K22300	48.7	7.6e-24	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0210434_11	phrog_8	47.7	6e-26	transcriptional regulator	transcription regulation
UniRef90	UHGV-0210434_11	UniRef90_A0A810Q1T1	63.2	0.00000000158	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0210434_11	552396.HMPREF0863_02446	53.1	0.000000372	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0210434_11	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
Pfam	UHGV-0210434_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
KOfam	UHGV-0210434_13	K22300	45.4	0.0000000000016	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0210434_13	phrog_8	42.5	0.000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0210434_13	UniRef90_A0A810PZI0	87.8	1.41e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0210434_13	1122143.AUEG01000004_gene1250	51.6	0.000000214	Helix-turn-helix domain	N/A
Pfam	UHGV-0210434_13	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0210434_13	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0210434_13	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210434_14	1235835.C814_03153	60.8	0.0000000000177	N/A	N/A
structural_annotation	UHGV-0210434_14	PF09035,NF040990	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210434_15	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210434_18	PF14634	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_20	phrog_27197	59.8	3e-17	N/A	unknown function
eggNOG-mapper	UHGV-0210434_20	394503.Ccel_3068	65.9	0.000000000217	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0210434_20	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0210434_20	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_21	phrog_155	152.2	2.8026e-45	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210434_21	UniRef90_UPI00130EB09C	207.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0210434_21	748224.HMPREF9436_03360	180.0	0	ERF superfamily	N/A
Pfam	UHGV-0210434_21	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0210434_21	PF04404,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-0210434_22	K03111	134.4	1.3e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0210434_22	phrog_44	129.8	2.1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210434_22	UniRef90_R6LVK0	150.0	1.20512e-43	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0210434_22	693746.OBV_19910	146.0	2.46629e-43	Single-strand binding protein family	N/A
Pfam	UHGV-0210434_22	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0210434_22	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0210434_22	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0210434_22	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0210434_22	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_23	phrog_5810	70.9	1.7e-20	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210434_23	UniRef90_UPI00164D8A5B	90.5	1.65e-17	replisome organizer	N/A
eggNOG-mapper	UHGV-0210434_23	742740.HMPREF9474_03117	189.0	0	N/A	N/A
structural_annotation	UHGV-0210434_23	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_27	phrog_1384	117.7	8.8e-35	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0210434_27	665956.HMPREF1032_03086	278.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0210434_27	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_28	phrog_3136	133.5	7.4e-40	N/A	unknown function
UniRef90	UHGV-0210434_28	UniRef90_A0A3D0HBD2	113.0	6.41e-29	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0210434_28	693746.OBV_25380	72.8	0.000000000000192	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0210434_28	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0210434_28	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0210434_28	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210434_31	UniRef90_A0A1C6DFA0	197.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0210434_31	397290.C810_01371	115.0	4.99e-30	N/A	N/A
Pfam	UHGV-0210434_31	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0210434_31	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_32	phrog_1770	55.1	0.0000000000000015	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0210434_32	536233.CLO_1822	157.0	0	N/A	N/A
structural_annotation	UHGV-0210434_32	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_35	phrog_801	75.9	7.6e-22	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-0210434_35	UniRef90_A0A316M891	97.1	5.61e-23	N/A	N/A
eggNOG-mapper	UHGV-0210434_35	1244856.K4PY83_9CAUD	53.9	0.00000148	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-0210434_35	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0210434_35	PF18909	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210434_36	UniRef90_A0A285PYI3	52.8	0.000000719	Homeodomain-like domain	N/A
eggNOG-mapper	UHGV-0210434_36	742738.HMPREF9460_02503	89.7	3.92e-22	N/A	N/A
structural_annotation	UHGV-0210434_36	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210434_37	UniRef90_A0A3B9CD52	52.8	0.000000283	S1-like domain-containing protein	N/A
structural_annotation	UHGV-0210434_37	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0210434_38	K07474	111.1	1.8e-32	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0210434_38	phrog_51	113.5	1.5e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0210434_38	UniRef90_UPI0004D8B773	118.0	8.19e-32	terminase small subunit	N/A
eggNOG-mapper	UHGV-0210434_38	476272.RUMHYD_01754	113.0	1.45e-30	Terminase small subunit	N/A
Pfam	UHGV-0210434_38	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0210434_38	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0210434_38	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0210434_39	K06909	379.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0210434_39	phrog_3717	165.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0210434_39	UniRef90_A0A2U1BEH4	704.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0210434_39	1123511.KB905868_gene187	464.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0210434_39	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0210434_39	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0210434_39	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0210434_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0210434_39	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_40	phrog_533	358.8	0	portal protein	head and packaging
UniRef90	UHGV-0210434_40	UniRef90_UPI0006C81717	701.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0210434_40	1226322.HMPREF1545_00044	611.0	0	N/A	N/A
Pfam	UHGV-0210434_40	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0210434_40	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_41	phrog_581	297.7	0	minor head protein	head and packaging
UniRef90	UHGV-0210434_41	UniRef90_A0A1C5N7V1	484.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0210434_41	1226322.HMPREF1545_00046	377.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0210434_41	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0210434_41	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210434_41	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_42	phrog_2303	49.3	0.000000000000055	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0210434_42	1226322.HMPREF1545_00049	162.0	0	N/A	N/A
PHROG	UHGV-0210434_43	phrog_10	169.1	0	major head protein	head and packaging
UniRef90	UHGV-0210434_43	UniRef90_A0A2U1BEF2	498.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0210434_43	1226322.HMPREF1545_00050	479.0	0	Phage capsid family	N/A
Pfam	UHGV-0210434_43	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0210434_43	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0210434_43	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0210434_43	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_44	phrog_541	105.0	4.3e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0210434_44	642492.Clole_0822	69.3	0.000000000000371	N/A	N/A
PHROG	UHGV-0210434_45	phrog_3366	104.3	9.3e-31	N/A	unknown function
eggNOG-mapper	UHGV-0210434_45	1226322.HMPREF1545_00053	164.0	0	N/A	N/A
Pfam	UHGV-0210434_45	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0210434_45	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_46	phrog_556	72.4	5.5e-21	minor head protein	head and packaging
UniRef90	UHGV-0210434_46	UniRef90_UPI00195E1497	218.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0210434_46	1226322.HMPREF1545_00054	165.0	0	Minor capsid protein	N/A
Pfam	UHGV-0210434_46	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0210434_46	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_47	phrog_3266	48.2	0.00000000000015	tail completion	connector
eggNOG-mapper	UHGV-0210434_47	1232443.BAIA02000078_gene24	164.0	0	N/A	N/A
structural_annotation	UHGV-0210434_47	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_48	phrog_3099	88.9	6.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0210434_48	1235797.C816_04186	225.0	0	N/A	N/A
structural_annotation	UHGV-0210434_48	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_49	phrog_11299	66.1	6.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0210434_49	693746.OBV_18160	132.0	1.24e-37	N/A	N/A
structural_annotation	UHGV-0210434_49	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_50	phrog_706	119.1	3.1e-35	N/A	unknown function
UniRef90	UHGV-0210434_50	UniRef90_A0A2U1BEN4	203.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0210434_50	693746.OBV_18170	191.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0210434_50	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0210434_50	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_51	phrog_1535	120.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0210434_51	UniRef90_A0A810PX76	212.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0210434_51	1235797.C816_04182	354.0	0	SLT domain	N/A
COG	UHGV-0210434_51	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_52	phrog_1194	70.0	3.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0210434_52	411902.CLOBOL_00125	109.0	4.18e-29	N/A	N/A
structural_annotation	UHGV-0210434_52	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_53	phrog_13879	231.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0210434_53	1226322.HMPREF1545_00061	379.0	0	N/A	N/A
structural_annotation	UHGV-0210434_53	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210434_54	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_55	phrog_31538	45.7	0.0000000000012	N/A	unknown function
PHROG	UHGV-0210434_56	phrog_13589	159.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0210434_56	428125.CLOLEP_01434	216.0	0	N/A	N/A
UniRef90	UHGV-0210434_57	UniRef90_R5IRZ6	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210434_57	1519439.JPJG01000060_gene1894	176.0	0	N/A	N/A
Pfam	UHGV-0210434_57	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0210434_57	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0210434_57	PF19789,PF13620,NF033708	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_58	phrog_18725	80.8	1.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0210434_58	693746.OBV_18220	126.0	7.91e-35	N/A	N/A
structural_annotation	UHGV-0210434_59	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
Pfam	UHGV-0210434_60	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-0210434_60	PF07484	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_63	phrog_13256	62.2	4.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0210434_63	1226322.HMPREF1545_00166	72.0	0.00000000000000115	N/A	N/A
UniRef90	UHGV-0210434_64	UniRef90_UPI00164EA432	224.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210434_64	525254.HMPREF0072_1273	220.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0210434_64	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0210434_64	NF033743	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210434_65	UniRef90_A0A1C6JAI6	62.4	0.0000000000475	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-0210434_65	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0210434_66	phrog_3754	102.7	2.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-0210434_66	1226322.HMPREF1545_00073	164.0	0	N/A	N/A
PHROG	UHGV-0210434_67	phrog_21718	113.1	1.9e-33	N/A	unknown function
eggNOG-mapper	UHGV-0210434_67	397290.C810_05210	72.8	0.0000000000000524	N/A	N/A
PHROG	UHGV-0210434_68	phrog_22984	74.1	1.6e-21	N/A	unknown function
PHROG	UHGV-0210434_69	phrog_16490	146.4	2.49431e-43	N/A	unknown function
eggNOG-mapper	UHGV-0210434_69	1408437.JNJN01000043_gene803	168.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0210434	Yes	38,013	53	100	1
UHGV-1483127	No	38,259	54	91	1
UHGV-1393912	No	38,078	53	90	1
UHGV-1398968	No	38,067	53	90	1
UHGV-1930964	No	38,044	53	90	1
UHGV-1506439	No	35,288	53	84	1
UHGV-2224141	No	24,072	54	57	1
UHGV-1790990	No	20,869	54	49	1
UHGV-1961704	No	16,947	54	40	1
UHGV-2224534	No	13,725	53	32	1