vOTU vOTU-048703

vOTU: vOTU-048703

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-048703
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_E
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00371 → vSUBGEN-07286 → vOTU-048703
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0210977
Biosample ID	SAMN09781773
Genome length (bp)	40,990 bps
CheckV completeness	100.00% (Complete)
CDS count	59
CDS density	89.32%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	663	Host agreement	98.64
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_E	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0210977_2	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0210977_2	PF06776,COG5342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210977_5	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210977_6	UniRef90_A0A2A7AM72	154.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0210977_6	1378168.N510_01712	75.5	0.00000000000000502	N/A	N/A
structural_annotation	UHGV-0210977_6	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210977_7	UniRef90_UPI000BEF0F65	91.3	5.24e-23	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0210977_7	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210977_13	760568.Desku_0919	101.0	5.78e-24	N/A	N/A
structural_annotation	UHGV-0210977_13	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
COG	UHGV-0210977_15	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0210977_15	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_16	phrog_72	54.3	0.0000000000000023	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0210977_16	411471.SUBVAR_05829	144.0	2.45003e-41	N/A	N/A
structural_annotation	UHGV-0210977_16	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_18	phrog_7566	81.3	7.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0210977_18	411471.SUBVAR_05830	103.0	1.84e-27	N/A	N/A
KOfam	UHGV-0210977_19	K03111	135.5	5.70001e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0210977_19	phrog_44	137.8	6.50006e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210977_19	UniRef90_A0A2A7B6R5	301.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0210977_19	748224.HMPREF9436_00638	207.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0210977_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0210977_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0210977_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0210977_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0210977_19	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_20	phrog_6969	58.7	7.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0210977_20	1232446.BAIE02000002_gene816	65.5	0.000000000923	N/A	N/A
Pfam	UHGV-0210977_20	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-0210977_20	PF04182,MF_01819,TIGR04176,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0210977_21	K03496	214.0	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0210977_21	phrog_164	151.5	5.60519e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210977_21	UniRef90_A0A2A7B6H3	500.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210977_21	411471.SUBVAR_05839	222.0	0	AAA domain	N/A
Pfam	UHGV-0210977_21	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0210977_21	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0210977_21	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
Pfam	UHGV-0210977_22	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0210977_22	PF20331,COG5264	N/A	N/A	N/A	N/A
KOfam	UHGV-0210977_23	K03497	83.0	6.1e-24	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0210977_23	phrog_4715	116.4	2.5e-34	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210977_23	UniRef90_A0A2A7B6Q0	780.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0210977_23	411471.SUBVAR_05842	179.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0210977_23	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0210977_23	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0210977_23	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210977_24	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_27	phrog_119	61.2	1.3e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210977_27	UniRef90_A0A2A7B6I3	241.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0210977_27	610130.Closa_0739	111.0	4.37e-29	HNH nucleases	N/A
Pfam	UHGV-0210977_27	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0210977_27	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0210977_28	phrog_13845	58.9	6.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-0210977_28	508419.F8J158_9CAUD	75.5	6.24e-16	N/A	N/A
Pfam	UHGV-0210977_28	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0210977_28	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_29	phrog_9	237.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0210977_29	UniRef90_A0A2A7ALT4	1069.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0210977_29	610130.Closa_0741	632.0	0	Phage Terminase	N/A
Pfam	UHGV-0210977_29	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0210977_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0210977_29	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_30	phrog_12	114.0	8.4e-34	portal protein	head and packaging
UniRef90	UHGV-0210977_30	UniRef90_A0A2A7B6S8	818.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0210977_30	349161.Dred_2606	278.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0210977_30	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0210977_30	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0210977_30	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0210977_30	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0210977_31	K01358	94.3	1.7e-27	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0210977_31	phrog_133	132.3	4e-39	head maturation protease	head and packaging
UniRef90	UHGV-0210977_31	UniRef90_UPI001C10F40E	160.0	1.12104e-44	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0210977_31	1121866.AUGK01000006_gene879	142.0	8.31e-39	Clp protease	N/A
Pfam	UHGV-0210977_31	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0210977_31	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0210977_31	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_32	phrog_8680	196.8	0	N/A	unknown function
UniRef90	UHGV-0210977_32	UniRef90_A0A844D688	410.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210977_32	411470.RUMGNA_02208	191.0	0	N/A	N/A
Pfam	UHGV-0210977_32	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0210977_32	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_33	phrog_10	137.8	6.89999e-41	major head protein	head and packaging
UniRef90	UHGV-0210977_33	UniRef90_A0A2A7B712	927.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0210977_33	1235792.C808_00086	459.0	0	Phage capsid family	N/A
Pfam	UHGV-0210977_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0210977_33	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0210977_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0210977_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0210977_33	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_34	phrog_749	56.7	3.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0210977_34	1235792.C808_00087	82.4	4.57e-19	N/A	N/A
PHROG	UHGV-0210977_35	phrog_19734	92.2	4.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0210977_35	349161.Dred_2602	74.7	0.00000000000000161	N/A	N/A
structural_annotation	UHGV-0210977_35	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210977_36	999413.HMPREF1094_02005	68.9	0.0000000000001	N/A	N/A
structural_annotation	UHGV-0210977_36	PF05657,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210977_37	UniRef90_A0A1C6FG30	133.0	1.82e-36	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0210977_37	1235798.C817_04589	108.0	1.6e-27	N/A	N/A
structural_annotation	UHGV-0210977_37	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_38	phrog_88	100.8	1.3e-29	major tail protein	tail
UniRef90	UHGV-0210977_38	UniRef90_UPI0018771F27	129.0	4.61e-34	phage tail protein	N/A
eggNOG-mapper	UHGV-0210977_38	349161.Dred_2600	65.1	0.000000000602	N/A	N/A
NCBIFam	UHGV-0210977_38	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0210977_38	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_41	phrog_9959	83.0	1.8e-24	tail length tape measure protein	tail
UniRef90	UHGV-0210977_41	UniRef90_A0A2A7B6K1	1505.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210977_41	596328.HMPREF0578_1241	152.0	7.34e-35	phage tail tape measure protein	N/A
Pfam	UHGV-0210977_41	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0210977_41	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0210977_41	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0210977_41	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_42	phrog_33	88.7	1e-25	distal tail protein Dit	tail
UniRef90	UHGV-0210977_42	UniRef90_A0A173Z1X4	145.0	1.24e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-0210977_42	1123315.AUIP01000014_gene1961	95.5	3.81e-21	tail component	N/A
COG	UHGV-0210977_42	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0210977_42	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_43	phrog_1067	190.0	0	minor head protein	head and packaging
UniRef90	UHGV-0210977_43	UniRef90_A0A2A7AM44	704.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0210977_43	1123263.AUKY01000068_gene489	191.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0210977_43	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0210977_43	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0210977_43	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0210977_43	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
KOfam	UHGV-0210977_45	K01126	63.9	1.9e-18	E3.1.4.46, glpQ, ugpQ; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]	N/A
eggNOG-mapper	UHGV-0210977_45	4899.EPX75302	57.4	0.00000624	Glycerophosphoryl diester phosphodiesterase	N/A
Pfam	UHGV-0210977_45	PF03009	N/A	N/A	Glycerophosphoryl diester phosphodiesterase family	GDPD
COG	UHGV-0210977_45	COG0584	N/A	N/A	Glycerophosphoryl diester phosphodiesterase	N/A
KOfam	UHGV-0210977_46	K07273	178.1	0	acm; lysozyme	N/A
PHROG	UHGV-0210977_46	phrog_291	142.7	2.90069e-42	endolysin	lysis
UniRef90	UHGV-0210977_46	UniRef90_UPI001D0EE7D8	303.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0210977_46	748224.HMPREF9436_00154	288.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0210977_46	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0210977_46	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0210977_46	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_47	phrog_1863	81.8	4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0210977_47	718252.FP2_04900	137.0	2.89004e-41	N/A	N/A
PHROG	UHGV-0210977_48	phrog_15303	84.7	8e-25	N/A	unknown function
UniRef90	UHGV-0210977_50	UniRef90_A0A1Q9JGI6	96.3	1.01e-22	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210977_50	1033733.CAEK01000007_gene1628	103.0	3.46e-26	N/A	N/A
structural_annotation	UHGV-0210977_50	PF03869,NF041793,COG4691	N/A	N/A	N/A	N/A
PHROG	UHGV-0210977_51	phrog_374	64.0	3.1e-24	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0210977_51	927704.SELR_12480	87.4	0.00000000000000184	N/A	N/A
Pfam	UHGV-0210977_51	PF18912	N/A	N/A	Double zinc ribbon domain	DZR_2
PHROG	UHGV-0210977_55	phrog_16490	102.0	1.9e-39	N/A	unknown function
eggNOG-mapper	UHGV-0210977_55	1408437.JNJN01000043_gene803	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210977_56	1408437.JNJN01000043_gene802	119.0	2.6e-33	N/A	N/A
eggNOG-mapper	UHGV-0210977_57	1408437.JNJN01000043_gene801	94.4	3.34e-21	N/A	N/A
KOfam	UHGV-0210977_58	K14059	209.4	0	int; integrase	N/A
PHROG	UHGV-0210977_58	phrog_1	209.3	0	integrase	integration and excision
UniRef90	UHGV-0210977_58	UniRef90_A0A367GI93	250.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0210977_58	1507.HMPREF0262_00307	179.0	0	Phage integrase family	N/A
Pfam	UHGV-0210977_58	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0210977_58	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0210977_58	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0210977_58	PF00589,PF13102,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210977_59	UniRef90_A0A2A7B6N3	406.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0210977_59	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0210977_59	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0210977	Yes	40,990	53	100	1
UHGV-0188978	No	33,607	55	83	1