vOTU vOTU-049137

vOTU: vOTU-049137

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-049137
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00248 → vSUBFAM-00936 → vGENUS-00839 → vSUBGEN-08991 → vOTU-049137
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium_P → Clostridium_P perfringens
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0218555
Biosample ID	SAMN14271015
Genome length (bp)	39,468 bps
CheckV completeness	100.00% (Complete)
CDS count	66
CDS density	89.50%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium_P → Clostridium_P perfringens	Total connections	71	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0218555_1	phrog_1313	154.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0218555_1	UniRef90_B6CXE0	448.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0218555_1	673376.F2VHW6_9CAUD	448.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0218555_1	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
PHROG	UHGV-0218555_2	phrog_194	66.2	6.1e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-0218555_2	UniRef90_B6CXE3	302.0	0	Fibronectin autolysin	N/A
eggNOG-mapper	UHGV-0218555_2	386415.NT01CX_2174	59.3	0.0000000293	Phage minor structural protein GP20	N/A
structural_annotation	UHGV-0218555_2	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_3	phrog_267	193.4	0	major head protein	head and packaging
UniRef90	UHGV-0218555_3	UniRef90_F8UBB7	492.0	0	p22 coat protein	N/A
eggNOG-mapper	UHGV-0218555_3	673376.F2VHW8_9CAUD	439.0	0	viral capsid	N/A
structural_annotation	UHGV-0218555_3	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_4	phrog_23208	444.0	0	virion structural protein	head and packaging
UniRef90	UHGV-0218555_4	UniRef90_B6CXE5	545.0	0	Pre-neck/exonuclease	N/A
eggNOG-mapper	UHGV-0218555_4	195103.CPF_1572	170.0	8.46006e-41	N/A	N/A
structural_annotation	UHGV-0218555_4	PF10651,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_5	phrog_1236	138.7	2.70002e-41	head protein	head and packaging
PHROG	UHGV-0218555_6	phrog_17977	250.2	0	N/A	unknown function
UniRef90	UHGV-0218555_6	UniRef90_UPI00141211AB	93.2	2.59e-22	head-tail adaptor protein	N/A
structural_annotation	UHGV-0218555_6	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_7	phrog_17405	264.0	0	head protein	head and packaging
structural_annotation	UHGV-0218555_7	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_8	phrog_885	160.5	0	major tail protein	tail
eggNOG-mapper	UHGV-0218555_8	1158602.I590_02571	68.2	0.0000000000274	N/A	N/A
structural_annotation	UHGV-0218555_8	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_9	phrog_18646	253.0	0	N/A	unknown function
UniRef90	UHGV-0218555_9	UniRef90_B6CXF0	216.0	0	Peptidase-colicin	N/A
PHROG	UHGV-0218555_10	phrog_33913	138.7	9.30042e-42	N/A	unknown function
UniRef90	UHGV-0218555_10	UniRef90_B6CXF1	104.0	3.38e-28	ATPase component	N/A
PHROG	UHGV-0218555_11	phrog_9696	223.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0218555_11	UniRef90_F8UBC7	399.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0218555_11	1415774.U728_1244	194.0	0	tail tape measure protein	N/A
Pfam	UHGV-0218555_11	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0218555_11	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0218555_11	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0218555_12	phrog_559	138.9	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0218555_12	UniRef90_A0A8F1QRM2	258.0	0	N/A	N/A
eggNOG-mapper	UHGV-0218555_12	1209989.TepiRe1_2594	206.0	0	Restriction endonuclease	N/A
Pfam	UHGV-0218555_12	PF10881	N/A	N/A	N/A	DUF2726
COG	UHGV-0218555_12	COG3440	N/A	N/A	Predicted restriction endonuclease	N/A
structural_annotation	UHGV-0218555_12	PF18741,PF14311,MF_04160,NF007294,COG3727	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_13	phrog_991	302.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0218555_13	UniRef90_B6CXF2	735.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0218555_13	483218.BACPEC_01318	207.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0218555_13	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0218555_13	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0218555_13	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0218555_15	phrog_33	63.1	7.2e-18	distal tail protein Dit	tail
UniRef90	UHGV-0218555_15	UniRef90_F8UBI2	444.0	0	Putative phage tail component	N/A
eggNOG-mapper	UHGV-0218555_15	999411.HMPREF1092_03310	82.8	2.46e-16	N/A	N/A
NCBIFam	UHGV-0218555_15	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0218555_15	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0218555_15	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0218555_16	K02238	132.9	2.1e-39	comEC; competence protein ComEC	N/A
PHROG	UHGV-0218555_16	phrog_7043	1072.4	0	tail protein	tail
UniRef90	UHGV-0218555_16	UniRef90_B6CXF5	1004.0	0	Endopeptidase-endolysin	N/A
eggNOG-mapper	UHGV-0218555_16	1292035.H476_1004	415.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0218555_16	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0218555_16	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
NCBIFam	UHGV-0218555_16	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
dbAPIS	UHGV-0218555_16	APIS001	N/A	N/A	N/A	N/A
COG	UHGV-0218555_16	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0218555_16	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-0218555_17	UniRef90_A0A5H2QRS2	828.0	0	Endopeptidase	N/A
eggNOG-mapper	UHGV-0218555_17	573061.Clocel_3531	130.0	3e-28	Phage minor structural protein	N/A
COG	UHGV-0218555_17	COG4926	N/A	N/A	Phage-related protein	N/A
KOfam	UHGV-0218555_18	K01448	112.8	3.4e-33	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0218555_18	phrog_435	183.2	0	endolysin	lysis
UniRef90	UHGV-0218555_18	UniRef90_G9J3I1	293.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0218555_18	1415774.U728_1232	196.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0218555_18	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0218555_18	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0218555_18	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
UniRef90	UHGV-0218555_19	UniRef90_F8UBN4	157.0	0	Small integral membrane protein	N/A
eggNOG-mapper	UHGV-0218555_19	999411.HMPREF1092_00546	57.0	0.000000000689	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0218555_19	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
COG	UHGV-0218555_19	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_20	phrog_1193	62.5	5.4e-18	hemolysin	other
UniRef90	UHGV-0218555_20	UniRef90_A0A5H2QSB7	157.0	0	Recombination related exonuclease	N/A
PHROG	UHGV-0218555_23	phrog_14211	243.1	0	anti-repressor	transcription regulation
UniRef90	UHGV-0218555_23	UniRef90_A0A5H2QUD5	246.0	0	Antirepressor protein	N/A
PHROG	UHGV-0218555_24	phrog_17736	104.9	3.2e-31	N/A	unknown function
PHROG	UHGV-0218555_25	phrog_17096	145.0	8.26766e-44	N/A	unknown function
PHROG	UHGV-0218555_26	phrog_9584	65.5	4.4e-19	N/A	unknown function
PHROG	UHGV-0218555_27	phrog_18689	197.9	0	N/A	unknown function
PHROG	UHGV-0218555_29	phrog_18566	113.4	5.7e-34	N/A	unknown function
PHROG	UHGV-0218555_30	phrog_130	93.4	3.1e-27	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0218555_30	UniRef90_A0A5H2QSC2	447.0	0	DNA binding protein	N/A
eggNOG-mapper	UHGV-0218555_30	1444310.JANV01000205_gene589	162.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0218555_30	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0218555_30	COG3617	N/A	N/A	Prophage antirepressor	N/A
PHROG	UHGV-0218555_33	phrog_16490	52.0	0.0000000000000046	N/A	unknown function
PHROG	UHGV-0218555_36	phrog_17454	182.7	0	N/A	unknown function
PHROG	UHGV-0218555_37	phrog_17879	407.6	0	N/A	unknown function
COG	UHGV-0218555_37	COG1528	N/A	N/A	Ferritin	N/A
structural_annotation	UHGV-0218555_37	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_38	phrog_19908	102.8	1.2e-30	N/A	unknown function
PHROG	UHGV-0218555_39	phrog_18368	174.3	0	N/A	unknown function
PHROG	UHGV-0218555_41	phrog_253	155.9	0	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0218555_41	UniRef90_B6CXH7	292.0	0	Gp157	N/A
eggNOG-mapper	UHGV-0218555_41	315749.Bcer98_2962	108.0	8.17e-28	Siphovirus Gp157	N/A
Pfam	UHGV-0218555_41	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0218555_41	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_42	phrog_2324	154.1	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0218555_42	UniRef90_F8UBF0	211.0	0	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-0218555_42	673376.F2VHU8_9CAUD	380.0	0	ERF superfamily	N/A
Pfam	UHGV-0218555_42	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0218555_42	PF04404,TIGR00607	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_43	phrog_3490	202.3	0	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0218555_43	UniRef90_A0A6L9ENY8	177.0	0	ERCC4-type nuclease	N/A
eggNOG-mapper	UHGV-0218555_43	673376.F2VHU9_9CAUD	366.0	0	nuclease activity	N/A
Pfam	UHGV-0218555_43	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0218555_43	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_44	phrog_16715	129.7	4.5e-39	N/A	unknown function
KOfam	UHGV-0218555_45	K03465	205.8	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-0218555_45	phrog_85	168.7	0	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0218555_45	UniRef90_F8UBK4	437.0	0	Predicted alternative thymidylate synthase	N/A
eggNOG-mapper	UHGV-0218555_45	673376.F2VHV1_9CAUD	371.0	0	flavin adenine dinucleotide binding	N/A
Pfam	UHGV-0218555_45	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-0218555_45	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
HAMAP	UHGV-0218555_45	MF_01408	N/A	N/A	Flavin-dependent thymidylate synthase [thyX]	N/A
structural_annotation	UHGV-0218555_45	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
KOfam	UHGV-0218555_47	K03111	117.6	1.8e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0218555_47	phrog_44	119.2	4.1e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0218555_47	UniRef90_F2VHV2	234.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0218555_47	673376.F2VHV2_9CAUD	234.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0218555_47	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0218555_47	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0218555_47	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0218555_47	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_48	phrog_27657	189.8	0	N/A	unknown function
PHROG	UHGV-0218555_49	phrog_5558	91.1	1.1e-26	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0218555_49	UniRef90_B6CXI4	218.0	0	XRE-like regulator	N/A
PHROG	UHGV-0218555_50	phrog_18098	747.7	0	N/A	unknown function
UniRef90	UHGV-0218555_50	UniRef90_F8UBK6	639.0	0	CHC2 zinc finger protein	N/A
Pfam	UHGV-0218555_50	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0218555_50	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
UniRef90	UHGV-0218555_51	UniRef90_B6CXI7	209.0	0	Cytolysin	N/A
PHROG	UHGV-0218555_53	phrog_2245	106.9	1.5e-31	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0218555_53	UniRef90_A0A5H2QSD0	194.0	0	Putative nucleoside triphosphate pyrophosphohydrolase	N/A
eggNOG-mapper	UHGV-0218555_53	1499683.CCFF01000005_gene41	50.4	0.00000109	N/A	N/A
structural_annotation	UHGV-0218555_53	PF01503,TIGR03188	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_54	phrog_18244	169.1	0	N/A	unknown function
PHROG	UHGV-0218555_55	phrog_31157	102.2	1.8e-30	N/A	unknown function
PHROG	UHGV-0218555_56	phrog_17705	151.9	2.8026e-45	N/A	unknown function
PHROG	UHGV-0218555_57	phrog_606	97.5	1.2e-28	terminase small subunit	head and packaging
UniRef90	UHGV-0218555_57	UniRef90_A0A6M3XSH7	97.8	1.29e-23	Putative terminase small subunit	N/A
eggNOG-mapper	UHGV-0218555_57	931276.Cspa_c57180	106.0	5.05e-28	DNA-packaging protein gp3	N/A
Pfam	UHGV-0218555_57	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-0218555_58	K06909	366.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0218555_58	phrog_18557	181.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0218555_58	UniRef90_B6CXD2	863.0	0	Large terminase	N/A
eggNOG-mapper	UHGV-0218555_58	1123511.KB905868_gene187	475.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0218555_58	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0218555_58	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0218555_58	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0218555_58	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0218555_58	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_59	phrog_236	103.0	5.2e-30	nucleotide kinase	other
UniRef90	UHGV-0218555_59	UniRef90_A0A6B4UVZ1	107.0	4.6e-29	N/A	N/A
eggNOG-mapper	UHGV-0218555_59	673376.F2VHW0_9CAUD	129.0	3.36e-38	N/A	N/A
Pfam	UHGV-0218555_59	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0218555_59	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_60	phrog_64	305.5	0	portal protein	head and packaging
UniRef90	UHGV-0218555_60	UniRef90_F8UBG3	882.0	0	Phage portal protein SPP1	N/A
eggNOG-mapper	UHGV-0218555_60	673376.F2VHW1_9CAUD	879.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0218555_60	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0218555_60	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_61	phrog_115	157.1	0	minor head protein	head and packaging
UniRef90	UHGV-0218555_61	UniRef90_B6CXD5	548.0	0	Minor head protein	N/A
eggNOG-mapper	UHGV-0218555_61	1504822.CCNO01000013_gene286	136.0	2.01e-33	cell adhesion	N/A
Pfam	UHGV-0218555_61	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0218555_61	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0218555_61	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0218555_61	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0218555_62	phrog_5	48.2	0.00000000000025	tail completion or Neck1 protein	connector
UniRef90	UHGV-0218555_62	UniRef90_A0A5H2QSD3	146.0	2.99878e-43	Putative tail component	N/A
PHROG	UHGV-0218555_63	phrog_22191	115.8	1.2e-34	N/A	unknown function
PHROG	UHGV-0218555_65	phrog_16621	118.9	8.5e-36	N/A	unknown function
PHROG	UHGV-0218555_66	phrog_1313	91.3	1e-26	DNA helicase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0218555_66	673376.F2VHW6_9CAUD	402.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0218555_66	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0218555	Yes	39,468	31	100	1