vOTU vOTU-049642

vOTU: vOTU-049642

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-049642
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00121 → vSUBGEN-38329 → vOTU-049642
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0254048
Biosample ID	N/A
Genome length (bp)	38,373 bps
CheckV completeness	100.00% (Complete)
CDS count	63
CDS density	92.34%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	330	Host agreement	89.09
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp900549635	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0254048_1	phrog_9	316.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0254048_1	UniRef90_UPI00148AEB9A	602.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0254048_1	1203606.HMPREF1526_00981	558.0	0	Terminase	N/A
Pfam	UHGV-0254048_1	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0254048_1	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0254048_1	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0254048_1	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_2	phrog_12	180.4	0	portal protein	head and packaging
UniRef90	UHGV-0254048_2	UniRef90_C4GAS6	505.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0254048_2	626523.GCWU000342_01027	505.0	0	Portal protein	N/A
Pfam	UHGV-0254048_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0254048_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0254048_2	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0254048_3	K01358	129.9	3e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0254048_3	phrog_94	198.5	0	head maturation protease	head and packaging
UniRef90	UHGV-0254048_3	UniRef90_UPI0018979DC8	206.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0254048_3	1280689.AUJC01000011_gene1520	194.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0254048_3	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0254048_3	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0254048_3	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_4	phrog_10	181.9	0	major head protein	head and packaging
UniRef90	UHGV-0254048_4	UniRef90_UPI00189AE5FE	402.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0254048_4	1280689.AUJC01000011_gene1521	392.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0254048_4	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0254048_4	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0254048_4	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0254048_4	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_5	phrog_5223	41.5	0.000000000018	neck protein	connector
UniRef90	UHGV-0254048_5	UniRef90_E6MGY0	54.3	0.000000161	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-0254048_5	887929.HMP0721_1264	54.3	0.000000027	N/A	N/A
PHROG	UHGV-0254048_6	phrog_1951	74.8	8.3e-22	head-tail adaptor	connector
UniRef90	UHGV-0254048_6	UniRef90_A0A1F8UNT5	65.1	0.0000000000123	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0254048_6	1094508.Tsac_2422	52.4	0.000000225	Phage head-tail joining protein	N/A
Pfam	UHGV-0254048_6	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0254048_6	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0254048_6	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0254048_6	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0254048_7	1487921.DP68_11350	61.2	0.000000000099	N/A	N/A
structural_annotation	UHGV-0254048_7	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_8	phrog_5	44.7	0.0000000000029	tail completion or Neck1 protein	connector
structural_annotation	UHGV-0254048_8	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_9	phrog_88	82.8	4.5e-24	major tail protein	tail
UniRef90	UHGV-0254048_9	UniRef90_S0FUN2	115.0	4.73e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0254048_9	1195236.CTER_5106	115.0	7.93e-30	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0254048_9	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0254048_9	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0254048_9	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0254048_10	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-0254048_11	K11547	42.6	0.0000000000059	NDC80, HEC1, TID3; kinetochore protein NDC80	N/A
PHROG	UHGV-0254048_11	phrog_8462	129.9	2.8e-38	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0254048_11	509191.AEDB02000020_gene3249	155.0	3.35e-36	tail tape measure protein, TP901	N/A
COG	UHGV-0254048_11	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0254048_11	TIGR01760,NF033928	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_12	phrog_37549	81.7	9.2e-28	virion structural protein	head and packaging
UniRef90	UHGV-0254048_12	UniRef90_A0A3D0W045	234.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0254048_12	1195236.CTER_5103	131.0	3.11e-29	N/A	N/A
structural_annotation	UHGV-0254048_12	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_13	phrog_26795	136.9	5.40004e-41	N/A	unknown function
eggNOG-mapper	UHGV-0254048_13	1195236.CTER_5102	151.0	1.11e-39	N/A	N/A
structural_annotation	UHGV-0254048_13	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0254048_14	PF18614,MF_00085,NF003076,COG0231	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0254048_16	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_17	phrog_19111	41.2	1.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0254048_17	411471.SUBVAR_06929	304.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0254048_17	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0254048_18	phrog_37900	330.1	0	N/A	unknown function
UniRef90	UHGV-0254048_18	UniRef90_UPI001C3EA4DF	405.0	0	N/A	N/A
eggNOG-mapper	UHGV-0254048_18	552398.HMPREF0866_03098	263.0	0	N/A	N/A
Pfam	UHGV-0254048_18	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0254048_18	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0254048_18	PF19789	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0254048_20	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_23	phrog_6918	95.2	4.4e-28	holin	lysis
UniRef90	UHGV-0254048_23	UniRef90_A0A316QCY7	102.0	3.48e-26	Holin	N/A
eggNOG-mapper	UHGV-0254048_23	1297617.JPJD01000020_gene301	100.0	2.43e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0254048_23	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0254048_23	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-0254048_24	UniRef90_UPI00164EA432	226.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0254048_24	525254.HMPREF0072_1273	222.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0254048_24	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0254048_24	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_26	phrog_16490	54.0	0.0000000000000037	N/A	unknown function
eggNOG-mapper	UHGV-0254048_26	641112.ACOK01000103_gene525	54.3	0.00000208	N/A	N/A
structural_annotation	UHGV-0254048_27	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0254048_28	UniRef90_A0A7M1RTM1	75.9	0.0000000000000433	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0254048_28	1378168.N510_03079	72.4	0.00000000000039	N/A	N/A
KOfam	UHGV-0254048_29	K06400	249.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0254048_29	phrog_95	264.4	0	integrase	integration and excision
UniRef90	UHGV-0254048_29	UniRef90_G9YSD9	416.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-0254048_29	1408437.JNJN01000002_gene1420	405.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0254048_29	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0254048_29	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0254048_29	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0254048_29	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0254048_29	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-0254048_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0254048_30	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_31	phrog_10292	75.6	3.3e-22	N/A	unknown function
UniRef90	UHGV-0254048_31	UniRef90_UPI00101CA94E	99.0	6.47e-24	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0254048_31	1198452.Jab_1c20720	82.0	4.16e-18	TM2 domain	N/A
Pfam	UHGV-0254048_31	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0254048_31	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0254048_31	COG2314	N/A	N/A	N/A	N/A
COG	UHGV-0254048_32	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-0254048_32	PF02805	N/A	N/A	N/A	N/A
KOfam	UHGV-0254048_34	K22300	52.2	0.000000000000015	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0254048_34	phrog_2967	50.8	0.000000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0254048_34	UniRef90_A0A1Y4L0A2	126.0	3.76e-35	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0254048_34	1235797.C816_03553	100.0	3.84e-25	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0254048_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0254048_34	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0254048_34	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0254048_42	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0254048_44	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0254048_45	PF05082	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_48	phrog_36399	50.4	0.000000000000044	N/A	unknown function
PHROG	UHGV-0254048_49	phrog_8470	257.3	0	N/A	unknown function
UniRef90	UHGV-0254048_49	UniRef90_UPI0002D9F0BD	299.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0254048_49	1007096.BAGW01000031_gene117	299.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0254048_49	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0254048_49	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_50	phrog_15609	229.6	0	N/A	unknown function
UniRef90	UHGV-0254048_50	UniRef90_UPI001246A313	86.3	0.00000000000000208	N/A	N/A
eggNOG-mapper	UHGV-0254048_50	1501230.ET33_21155	123.0	9.67e-30	N/A	N/A
Pfam	UHGV-0254048_50	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0254048_50	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-0254048_50	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_51	phrog_3136	133.6	6.50001e-40	N/A	unknown function
UniRef90	UHGV-0254048_51	UniRef90_A0A3D0HBD2	115.0	1.13e-29	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0254048_51	642492.Clole_1416	70.9	0.0000000000000884	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0254048_51	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0254048_51	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0254048_51	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_52	phrog_355	78.0	1.2e-22	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0254048_52	UniRef90_A0A413FXK8	118.0	9.99e-33	N/A	N/A
eggNOG-mapper	UHGV-0254048_52	573061.Clocel_3558	89.7	4.36e-22	N/A	N/A
Pfam	UHGV-0254048_52	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0254048_52	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0254048_52	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_53	phrog_38832	47.2	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0254048_53	665956.HMPREF1032_03087	100.0	3.73e-25	N/A	N/A
PHROG	UHGV-0254048_59	phrog_3584	115.3	4.7e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0254048_59	537013.CLOSTMETH_02141	73.9	0.000000000000248	N/A	N/A
structural_annotation	UHGV-0254048_59	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0254048_60	1297617.JPJD01000059_gene2640	83.2	1.44e-18	N/A	N/A
structural_annotation	UHGV-0254048_60	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_61	phrog_119	48.5	0.00000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0254048_61	UniRef90_A0A174XSZ8	124.0	1.18e-34	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-0254048_61	1235793.C809_01915	120.0	1.22e-33	HNH endonuclease	N/A
COG	UHGV-0254048_61	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0254048_62	phrog_1066	129.6	1.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-0254048_62	1382358.JHVN01000024_gene1703	124.0	4.78e-35	N/A	N/A
structural_annotation	UHGV-0254048_62	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0254048_63	phrog_4914	77.8	1.6e-22	terminase large subunit	head and packaging
UniRef90	UHGV-0254048_63	UniRef90_Q637A5	159.0	0	Terminase large subunit, N-terminal region	N/A
eggNOG-mapper	UHGV-0254048_63	1203606.HMPREF1526_00981	180.0	0	Terminase	N/A
Pfam	UHGV-0254048_63	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
COG	UHGV-0254048_63	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0254048	Yes	38,373	59	100	1