vOTU vOTU-049665

vOTU: vOTU-049665

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-049665
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00034 → vSUBGEN-39024 → vOTU-049665
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0255746
Biosample ID	SAMN09605444
Genome length (bp)	41,453 bps
CheckV completeness	100.00% (Complete)
CDS count	73
CDS density	91.96%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	909	Host agreement	97.36
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0255746_3	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_4	phrog_20016	202.8	0	N/A	unknown function
UniRef90	UHGV-0255746_4	UniRef90_A0A285PT46	211.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0255746_4	1226322.HMPREF1545_00077	181.0	0	N/A	N/A
structural_annotation	UHGV-0255746_4	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_6	phrog_16490	145.4	3.29305e-43	N/A	unknown function
eggNOG-mapper	UHGV-0255746_6	1408437.JNJN01000043_gene803	144.0	1.08e-39	N/A	N/A
PHROG	UHGV-0255746_7	phrog_22984	80.5	1.2e-23	N/A	unknown function
PHROG	UHGV-0255746_8	phrog_21718	116.0	2.9e-34	N/A	unknown function
eggNOG-mapper	UHGV-0255746_8	397290.C810_05210	95.9	6.66e-23	N/A	N/A
PHROG	UHGV-0255746_9	phrog_3754	100.2	1.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-0255746_9	1235790.C805_00054	111.0	4.56e-30	N/A	N/A
eggNOG-mapper	UHGV-0255746_11	1235798.C817_04600	50.1	0.00000215	N/A	N/A
Pfam	UHGV-0255746_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0255746_11	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_13	phrog_5765	58.4	8.8e-17	N/A	unknown function
UniRef90	UHGV-0255746_13	UniRef90_UPI001D0EF465	65.1	0.000000000000634	BC1881 family protein	N/A
eggNOG-mapper	UHGV-0255746_13	1095750.HMPREF9970_1008	57.8	0.0000000000597	N/A	N/A
NCBIFam	UHGV-0255746_13	NF033495.1	N/A	N/A	BC1881 family protein	N/A
KOfam	UHGV-0255746_16	K24213	66.8	2.4e-19	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0255746_16	phrog_6320	76.6	2.7e-22	tail fiber protein	tail
UniRef90	UHGV-0255746_16	UniRef90_UPI0018835F0C	629.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0255746_16	411483.FAEPRAA2165_00757	169.0	8.40779e-45	N/A	N/A
Pfam	UHGV-0255746_16	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0255746_16	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_17	phrog_15303	116.4	1.3e-34	N/A	unknown function
Pfam	UHGV-0255746_17	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
KOfam	UHGV-0255746_19	K07273	182.8	0	acm; lysozyme	N/A
PHROG	UHGV-0255746_19	phrog_291	138.0	8.19998e-41	endolysin	lysis
UniRef90	UHGV-0255746_19	UniRef90_A0A564U0D3	369.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0255746_19	718252.FP2_04890	236.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0255746_19	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0255746_19	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0255746_19	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_20	phrog_1382	46.9	0.00000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0255746_20	1410650.JHWL01000003_gene2818	45.8	0.00000483	N/A	N/A
eggNOG-mapper	UHGV-0255746_22	748224.HMPREF9436_01407	162.0	2.53635e-43	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0255746_23	phrog_3558	202.4	0	tail protein	tail
UniRef90	UHGV-0255746_23	UniRef90_R9C6X0	63.9	0.000000443	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-0255746_23	1035184.HMPREF1042_1326	83.2	0.0000000000000618	Prophage endopeptidase tail	N/A
Pfam	UHGV-0255746_23	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0255746_23	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0255746_23	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0255746_24	UniRef90_A0A417QGC1	115.0	8.73e-28	MtfA protein	N/A
eggNOG-mapper	UHGV-0255746_24	1235792.C808_00094	98.6	5.47e-22	phage tail	N/A
COG	UHGV-0255746_24	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0255746_24	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_25	phrog_28775	122.1	4.4e-36	tail length tape measure protein	tail
UniRef90	UHGV-0255746_25	UniRef90_A0A6N7TLD3	1420.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0255746_25	1492737.FEM08_12070	139.0	1.51e-31	tape measure	N/A
Pfam	UHGV-0255746_25	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0255746_25	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0255746_25	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0255746_25	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_28	phrog_885	68.3	1e-19	major tail protein	tail
eggNOG-mapper	UHGV-0255746_28	1111121.HMPREF1247_0789	172.0	0	N/A	N/A
structural_annotation	UHGV-0255746_28	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255746_29	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_30	phrog_17977	41.3	0.000000000023	N/A	unknown function
UniRef90	UHGV-0255746_30	UniRef90_A0A844DHJ8	119.0	2.31e-32	Phage head closure protein	N/A
structural_annotation	UHGV-0255746_30	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_32	phrog_544	139.4	2.50006e-41	major head protein	head and packaging
UniRef90	UHGV-0255746_32	UniRef90_R0BKA1	436.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0255746_32	476272.RUMHYD_01776	319.0	0	N/A	N/A
structural_annotation	UHGV-0255746_32	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_34	phrog_478	126.4	1.3e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0255746_34	UniRef90_A0A373Q857	168.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0255746_34	1111121.HMPREF1247_0834	94.0	6.35e-23	N/A	N/A
PHROG	UHGV-0255746_36	phrog_5	51.0	0.000000000000038	tail completion or Neck1 protein	connector
UniRef90	UHGV-0255746_36	UniRef90_A0A6N7TNP6	289.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0255746_36	1123309.AQYB01000018_gene814	92.4	6e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0255746_36	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0255746_36	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0255746_36	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_38	phrog_2468	82.3	4.2e-24	head morphogenesis	head and packaging
UniRef90	UHGV-0255746_38	UniRef90_A0A6N7TLR7	605.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0255746_38	1504822.CCNO01000013_gene286	110.0	1.17e-23	cell adhesion	N/A
Pfam	UHGV-0255746_38	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0255746_38	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255746_38	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_40	phrog_64	127.6	4.8e-38	portal protein	head and packaging
UniRef90	UHGV-0255746_40	UniRef90_A0A6N7TNT3	879.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0255746_40	642492.Clole_2764	81.6	0.0000000000000991	phage portal protein, SPP1	N/A
Pfam	UHGV-0255746_40	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0255746_40	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0255746_41	K06909	137.3	1.6e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0255746_41	phrog_10250	169.8	0	N/A	unknown function
UniRef90	UHGV-0255746_41	UniRef90_A0A844D8I4	837.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0255746_41	411490.ANACAC_00783	489.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0255746_41	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0255746_41	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0255746_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0255746_41	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0255746_42	UniRef90_UPI0018CC2891	115.0	5.69e-30	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0255746_42	1235790.C805_00037	112.0	2.51e-29	N/A	N/A
structural_annotation	UHGV-0255746_42	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_43	phrog_36	40.0	0.000000000072	transcriptional regulator	transcription regulation
UniRef90	UHGV-0255746_43	UniRef90_A0A6N7TNN9	70.5	0.00000000000231	N/A	N/A
structural_annotation	UHGV-0255746_43	PF07374	N/A	N/A	N/A	N/A
KOfam	UHGV-0255746_45	K01160	58.2	2.7e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0255746_45	phrog_34	60.9	2.8e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0255746_45	UniRef90_A0A6N7TND6	215.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0255746_45	875454.BAEW01000002_gene491	134.0	3.36e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0255746_45	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0255746_45	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0255746_45	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_46	phrog_3136	120.3	9.8e-36	N/A	unknown function
UniRef90	UHGV-0255746_46	UniRef90_A0A6N7TMC2	419.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0255746_46	1235792.C808_00630	75.1	0.0000000000000659	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0255746_46	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0255746_46	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0255746_46	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0255746_48	UniRef90_A0A845R8R0	103.0	7.11e-26	N/A	N/A
structural_annotation	UHGV-0255746_49	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_50	phrog_16304	62.2	9.7e-18	N/A	unknown function
UniRef90	UHGV-0255746_50	UniRef90_A0A844D5V0	189.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0255746_50	411483.FAEPRAA2165_01308	55.1	0.00000537	N/A	N/A
Pfam	UHGV-0255746_50	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0255746_50	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
COG	UHGV-0255746_50	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0255746_50	PF19808,TIGR01446	N/A	N/A	N/A	N/A
KOfam	UHGV-0255746_51	K03111	40.0	0.000000000085	ssb; single-strand DNA-binding protein	N/A
UniRef90	UHGV-0255746_51	UniRef90_UPI001CBB85F6	117.0	7.5e-30	single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0255746_51	PF00436,MF_00720,NF004512,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_52	phrog_2760	183.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0255746_52	UniRef90_A0A3A6EAW6	478.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0255746_52	1235794.C811_01355	148.0	5.23e-40	RecT family	N/A
Pfam	UHGV-0255746_52	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0255746_52	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0255746_52	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0255746_52	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_53	phrog_674	144.3	9.5008e-43	N/A	unknown function
UniRef90	UHGV-0255746_53	UniRef90_A0A3A6E846	538.0	0	N/A	N/A
eggNOG-mapper	UHGV-0255746_53	556268.OFAG_00840	85.9	1.42e-16	N/A	N/A
Pfam	UHGV-0255746_53	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0255746_53	PF07083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255746_54	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255746_57	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255746_58	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255746_59	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0255746_61	phrog_4433	135.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0255746_61	394503.Ccel_3068	112.0	3.12e-28	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0255746_61	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
eggNOG-mapper	UHGV-0255746_63	760568.Desku_0919	96.7	5.19e-22	N/A	N/A
structural_annotation	UHGV-0255746_63	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0255746_64	K07741	134.6	1.7e-39	antB; anti-repressor protein	N/A
PHROG	UHGV-0255746_64	phrog_63	114.5	1.2e-33	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0255746_64	UniRef90_A0A6N7TLD1	275.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-0255746_64	1051631.F8HGQ0_9CAUD	210.0	0	DNA binding	N/A
Pfam	UHGV-0255746_64	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0255746_64	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0255746_64	PF03374,PF08346,TIGR02681,COG3561,COG3645	N/A	N/A	N/A	N/A
KOfam	UHGV-0255746_65	K07729	43.2	0.0000000000088	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0255746_65	phrog_8	41.7	0.000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-0255746_65	UniRef90_UPI001C009F10	112.0	5.3e-31	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0255746_65	1268072.PSAB_01325	50.4	0.000000253	Transcriptional regulator	N/A
Pfam	UHGV-0255746_65	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0255746_65	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0255746_66	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255746_67	PF09202,MF_01819,NF041230,COG1321	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255746_70	PF16900,NF040991	N/A	N/A	N/A	N/A
UniRef90	UHGV-0255746_72	UniRef90_A0A6N7TLT0	341.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0255746_72	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0255746_72	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0255746_72	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0255746_73	K14059	139.9	3.20001e-41	int; integrase	N/A
PHROG	UHGV-0255746_73	phrog_1	163.6	0	integrase	integration and excision
UniRef90	UHGV-0255746_73	UniRef90_A0A6N7TNQ4	739.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0255746_73	411471.SUBVAR_05137	261.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0255746_73	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0255746_73	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0255746_73	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0255746	Yes	41,453	55	100	1
UHGV-1461292	No	41,377	54	98	1