vOTU vOTU-050230

vOTU: vOTU-050230

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-050230
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00150 → vSUBFAM-02430 → vGENUS-02951 → vSUBGEN-03449 → vOTU-050230
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0296578
Biosample ID	SAMEA4813851
Genome length (bp)	45,859 bps
CheckV completeness	100.00% (Complete)
CDS count	65
CDS density	93.41%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74	Total connections	8	Host agreement	75
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0296578_1	phrog_372	150.5	1.26117e-44	tail protein	tail
UniRef90	UHGV-0296578_1	UniRef90_A0A351TJT1	146.0	1.09e-33	Pilus assembly protein	N/A
eggNOG-mapper	UHGV-0296578_1	1416759.AYMR01000009_gene3061	139.0	1.25e-31	N/A	N/A
Pfam	UHGV-0296578_1	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0296578_1	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
COG	UHGV-0296578_2	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0296578_3	PF11134,MF_03022,NF010237,TIGR04362,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0296578_6	phrog_1357	166.8	0	major head protein	head and packaging
UniRef90	UHGV-0296578_6	UniRef90_A0A316LAS1	213.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0296578_6	935837.JAEK01000054_gene1469	187.0	0	N/A	N/A
NCBIFam	UHGV-0296578_6	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0296578_6	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0296578_8	phrog_156	213.2	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0296578_8	748224.HMPREF9436_02547	147.0	8.2e-35	N/A	N/A
structural_annotation	UHGV-0296578_8	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0296578_9	K06909	130.9	1.4e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0296578_9	phrog_979	165.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0296578_9	UniRef90_UPI0004130EC4	541.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0296578_9	1121091.AUMP01000003_gene2581	541.0	0	Terminase-like family	N/A
Pfam	UHGV-0296578_9	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0296578_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0296578_9	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-0296578_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
UniRef90	UHGV-0296578_12	UniRef90_UPI00196212E2	357.0	0	N/A	N/A
eggNOG-mapper	UHGV-0296578_12	397291.C804_03513	358.0	0	N/A	N/A
Pfam	UHGV-0296578_12	PF12083	N/A	N/A	N/A	DUF3560
structural_annotation	UHGV-0296578_12	PF12083,PF19881,TIGR00739,COG1862	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0296578_16	1280664.AUIX01000040_gene2326	53.5	0.00000131	Plasmid pRiA4b ORF-3-like protein	N/A
Pfam	UHGV-0296578_16	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-0296578_16	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0296578_17	K23779	44.1	0.0000000000047	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0296578_17	phrog_5823	44.1	0.0000000000031	transcriptional regulator	transcription regulation
Pfam	UHGV-0296578_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0296578_17	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0296578_17	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0296578_18	phrog_36	53.9	0.0000000000000038	transcriptional regulator	transcription regulation
UniRef90	UHGV-0296578_18	UniRef90_UPI001D0605E0	53.9	0.00000176	N/A	N/A
eggNOG-mapper	UHGV-0296578_18	1408311.JNJM01000040_gene948	53.5	0.00000046	N/A	N/A
Pfam	UHGV-0296578_18	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0296578_18	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0296578_18	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0296578_20	TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0296578_27	phrog_8841	444.1	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0296578_27	UniRef90_UPI0016512652	535.0	0	N/A	N/A
eggNOG-mapper	UHGV-0296578_27	742738.HMPREF9460_02495	405.0	0	N/A	N/A
Pfam	UHGV-0296578_27	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0296578_27	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0296578_27	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0296578_27	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0296578_28	K02316	75.9	6.1e-22	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0296578_28	phrog_11992	88.9	4e-26	N/A	unknown function
UniRef90	UHGV-0296578_28	UniRef90_A0A174R7C7	90.5	3.74e-19	DNA primase (Bacterial type)	N/A
eggNOG-mapper	UHGV-0296578_28	397290.C810_04602	86.7	2.14e-18	CHC2 zinc finger	N/A
PADLOC	UHGV-0296578_28	drt-UG29	73.4	2.2e-21	DRT	DRT
Pfam	UHGV-0296578_28	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0296578_28	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
PHROG	UHGV-0296578_29	phrog_3490	119.2	2.7e-35	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0296578_29	UniRef90_A0A6N7SRA2	129.0	1.1e-34	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0296578_29	1256908.HMPREF0373_00660	110.0	2.85e-28	N/A	N/A
Pfam	UHGV-0296578_29	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0296578_29	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0296578_30	phrog_18107	67.0	2.5e-19	N/A	unknown function
UniRef90	UHGV-0296578_30	UniRef90_UPI00058F46CC	106.0	1.33e-25	N/A	N/A
eggNOG-mapper	UHGV-0296578_30	903814.ELI_1274	117.0	1.35e-30	N/A	N/A
structural_annotation	UHGV-0296578_30	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0296578_32	phrog_2872	236.2	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0296578_32	UniRef90_A0A8J6JIF1	249.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0296578_32	754027.HMPREF9554_00709	219.0	0	N/A	N/A
structural_annotation	UHGV-0296578_32	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0296578_34	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
KOfam	UHGV-0296578_45	K18830	67.2	3.8e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0296578_45	phrog_2967	57.4	2.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0296578_45	UniRef90_UPI001A9C6895	131.0	5.95e-37	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0296578_45	97138.C820_01960	116.0	7.55e-32	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0296578_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0296578_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0296578_45	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0296578_48	K14059	151.3	1.12104e-44	int; integrase	N/A
PHROG	UHGV-0296578_48	phrog_1	157.2	0	integrase	integration and excision
UniRef90	UHGV-0296578_48	UniRef90_A0A1C6JHT2	243.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0296578_48	1507.HMPREF0262_00420	209.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0296578_48	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0296578_48	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0296578_48	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0296578_49	1408437.JNJN01000043_gene801	68.6	0.0000000000218	N/A	N/A
eggNOG-mapper	UHGV-0296578_50	1408437.JNJN01000043_gene802	159.0	0	N/A	N/A
PHROG	UHGV-0296578_51	phrog_16490	202.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0296578_51	1408437.JNJN01000043_gene803	241.0	0	N/A	N/A
eggNOG-mapper	UHGV-0296578_52	476272.RUMHYD_01953	50.8	0.00000027	N/A	N/A
eggNOG-mapper	UHGV-0296578_53	445972.ANACOL_01878	57.8	0.0000000106	N/A	N/A
Pfam	UHGV-0296578_54	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-0296578_54	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0296578_55	1408437.JNJN01000060_gene452	395.0	0	heme binding	N/A
COG	UHGV-0296578_55	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
eggNOG-mapper	UHGV-0296578_57	411470.RUMGNA_00254	79.7	1.25e-18	N/A	N/A
PHROG	UHGV-0296578_58	phrog_355	61.7	1.2e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0296578_58	UniRef90_A0A3A9J0H5	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-0296578_58	97138.C820_00250	127.0	7.93e-37	N/A	N/A
Pfam	UHGV-0296578_58	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0296578_58	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0296578_59	phrog_4105	96.9	1.4e-28	N/A	unknown function
UniRef90	UHGV-0296578_59	UniRef90_A0A8D9UHA9	127.0	2.68e-36	Holin protein	N/A
eggNOG-mapper	UHGV-0296578_59	742733.HMPREF9469_05011	125.0	3.02e-36	N/A	N/A
KOfam	UHGV-0296578_60	K21471	48.8	0.00000000000016	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-0296578_60	UniRef90_K1TIU6	73.9	0.00000000000595	Protein containing SH3, type 3 domain protein	N/A
eggNOG-mapper	UHGV-0296578_60	871963.Desdi_1740	57.8	0.000000828	NLP P60 protein	N/A
Pfam	UHGV-0296578_60	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0296578_60	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0296578_60	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0296578_60	PF00877,PF18342,NF033742,COG0791,COG3103	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0296578_62	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0296578_62	NF040910	N/A	N/A	N/A	N/A
KOfam	UHGV-0296578_64	K24213	54.8	0.0000000000000011	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0296578_64	phrog_5073	63.5	3e-18	tail fiber protein	tail
Pfam	UHGV-0296578_64	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0296578	Yes	45,859	57	100	1
UHGV-1880176	No	11,928	58	25	1